Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -187,23 +187,24 @@ then load, featurize, split, fit, and evaluate the catboost model
|
|
| 187 |
|
| 188 |
## About the DB3B
|
| 189 |
|
| 190 |
-
###
|
| 191 |
|
| 192 |
-
|
| 193 |
-
(to the best of our knowledge, as of February 25, 2021).
|
| 194 |
|
| 195 |
-
|
| 196 |
-
available. Otherwise, canonical SMILES are used.
|
| 197 |
|
| 198 |
-
|
| 199 |
-
|
|
|
|
| 200 |
|
| 201 |
-
|
| 202 |
-
|
|
|
|
|
|
|
| 203 |
|
| 204 |
|
| 205 |
### Data splits
|
| 206 |
-
The original
|
| 207 |
in [(Martin et al., 2018)](https://doi.org/10.1021/acs.jcim.7b00166).
|
| 208 |
|
| 209 |
### Citation
|
|
|
|
| 187 |
|
| 188 |
## About the DB3B
|
| 189 |
|
| 190 |
+
### Overview
|
| 191 |
|
| 192 |
+
This repository has been developed in order to curate various aqueous solubility datasets into a broad and extensive dataset called AqSolDB.
|
|
|
|
| 193 |
|
| 194 |
+
The curation process in this work can be accomplished by executing two python scripts in the given sequence:
|
|
|
|
| 195 |
|
| 196 |
+
data-preprocess.py - for pre-processing the raw data set to a standardized format
|
| 197 |
+
data-curation.py - for merging the standardized datasets, assigning reliability lables and adding 2D descriptors
|
| 198 |
+
These two python scripts call upon functions from other python modules that are defined in:
|
| 199 |
|
| 200 |
+
preprocess.py
|
| 201 |
+
merge.py
|
| 202 |
+
descriptors.py
|
| 203 |
+
Further information about curation process can be found in the associated manuscript.
|
| 204 |
|
| 205 |
|
| 206 |
### Data splits
|
| 207 |
+
The original AqSoDB dataset does not define splits, so here we have used the `Realistic Split` method described
|
| 208 |
in [(Martin et al., 2018)](https://doi.org/10.1021/acs.jcim.7b00166).
|
| 209 |
|
| 210 |
### Citation
|