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36195d7
1
Parent(s):
dc3a349
Update code/add_structure.py
Browse files- code/add_structure.py +0 -7
code/add_structure.py
CHANGED
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@@ -302,7 +302,6 @@ def match3DModels(data):
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for i in data.index:
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pos = int(data.at[i, 'pos'])
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coords = data.at[i, 'coordinates']
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st.write('POS', pos)
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if type(coords) != dict:
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coordinates = ast.literal_eval(coords)
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else:
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@@ -312,10 +311,6 @@ def match3DModels(data):
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if data.at[i, 'distance'] == -1000:
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domStart = data.at[i, 'domStart']
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domEnd = data.at[i, 'domEnd']
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st.write('domStart', domStart)
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st.write('domEnd', domEnd)
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st.write(domainDistanceModels(domStart, domEnd, coordinates, pos))
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data.at[i, 'distance'] = domainDistanceModels(domStart, domEnd, coordinates, pos)
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for col in UNIPROT_ANNOTATION_COLS[0:30]:
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allDist = []
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st.write('col', col, data.at[i, col], len(data.at[i, col]))
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@@ -328,8 +323,6 @@ def match3DModels(data):
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except KeyError:
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coordAnnot = []
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distance = find_distance(coordMut, coordAnnot)
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st.write('DISTANCE')
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st.write(distance)
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allDist.append(distance)
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if len(allDist)>0:
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for i in data.index:
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pos = int(data.at[i, 'pos'])
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coords = data.at[i, 'coordinates']
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if type(coords) != dict:
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coordinates = ast.literal_eval(coords)
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else:
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if data.at[i, 'distance'] == -1000:
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domStart = data.at[i, 'domStart']
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domEnd = data.at[i, 'domEnd']
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for col in UNIPROT_ANNOTATION_COLS[0:30]:
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allDist = []
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st.write('col', col, data.at[i, col], len(data.at[i, col]))
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except KeyError:
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coordAnnot = []
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distance = find_distance(coordMut, coordAnnot)
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allDist.append(distance)
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if len(allDist)>0:
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