Update code/add_3Dalignment.py

code/add_3Dalignment.py

@@ -214,7 +214,7 @@ def get_coords(annot, alignments, coords, resnums_for_sasa, mode):
             return np.NaN, np.NaN, np.NaN
 
 
-def get_alignments_3D(identifier, model_num, pdbSequence, source, chain, pdbID, mode, file_format = 'gzip'):
+def get_alignments_3D(identifier, model_num, pdb_path, pdbSequence, source, chain, pdbID, mode, path_3D_alignment,file_format = 'gzip'):
     print('In Function')
     pdbSequence = convert_non_standard_amino_acids(pdbSequence)
     print(pdbSequence)