Update code/pdb_featureVector.py

code/pdb_featureVector.py

@@ -437,14 +437,17 @@ def pdb(input_set, mode, impute):
         st.write(dfM)
         st.write('dfNM')
         st.write(dfNM)
+        
         print('Aligning sequences...\n')
         aligned_m = final_stage(dfM, annotation_list, Path(path_to_output_files / 'alignment_files'))
         aligned_nm = final_stage(dfNM, annotation_list, Path(path_to_output_files / 'alignment_files'))
+        
         st.write('aligned_m')
         st.write(aligned_m)
         
         st.write('aligned_nm')
         st.write(aligned_nm)
+        
         # When PDB sequence is nan, it is wrongly aligned to the UniProt sequence. Fix them.
         for i in aligned_m.index:
             if aligned_m.at[i, 'pdbSequence'] == 'nan':