Spaces:
Sleeping
Sleeping
Commit
·
887760c
1
Parent(s):
6241086
Update code/add_sasa.py
Browse files- code/add_sasa.py +5 -1
code/add_sasa.py
CHANGED
|
@@ -44,11 +44,15 @@ def run_freesasa(infile, outfile, include_hetatms=True, outdir=None, force_rerun
|
|
| 44 |
stderr=subprocess.PIPE,
|
| 45 |
shell=True)
|
| 46 |
out, err = command.communicate()
|
|
|
|
|
|
|
| 47 |
api = HfApi()
|
|
|
|
|
|
|
| 48 |
api.upload_file(
|
| 49 |
path_or_fileobj=outfile,
|
| 50 |
path_in_repo="out_files/pdb/freesasa_files",
|
| 51 |
-
repo_id="
|
| 52 |
repo_type="space")
|
| 53 |
return outfile
|
| 54 |
|
|
|
|
| 44 |
stderr=subprocess.PIPE,
|
| 45 |
shell=True)
|
| 46 |
out, err = command.communicate()
|
| 47 |
+
st.write('OUT')
|
| 48 |
+
st.write(outfile)
|
| 49 |
api = HfApi()
|
| 50 |
+
st.wrte('API')
|
| 51 |
+
st.write(api)
|
| 52 |
api.upload_file(
|
| 53 |
path_or_fileobj=outfile,
|
| 54 |
path_in_repo="out_files/pdb/freesasa_files",
|
| 55 |
+
repo_id="HUBioDataLab/ASCARIS",
|
| 56 |
repo_type="space")
|
| 57 |
return outfile
|
| 58 |
|