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cc5473e
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Parent(s):
e7b2e34
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
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@@ -383,7 +383,10 @@ def alphafold(input_set, mode, impute):
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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with gzip.open(pdb_path, mode="rt") as f:
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file_content = f.read()
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st.write(file_content)
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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#pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-O00560-F1-model_v4.pdb.gz",repo_type = 'dataset')
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with gzip.open(pdb_path, mode="rt") as f:
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file_content = f.read()
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st.write(file_content)
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