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df5ae4f
1
Parent(s):
de0c1bf
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
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@@ -722,13 +722,23 @@ def alphafold(input_set, mode, impute):
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st.write(list(filter(None,k.split(' ')))[5])
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if wt == threeToOne(residue):
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sasa = str(list(filter(None,k.split(' ')))[5]).strip('\n')
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elif wt != threeToOne(residue):
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sasa = str(list(filter(None,k.split(' ')))[5]).strip('\n') + '*'
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else:
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sasa = 'nan'
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else:
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sasa = 'nan'
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#sasa_val = sasa('alphafold', 'nan', uniprotID, sasa_pos, uniprot_matched.at[i, 'wt'], mode,
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# path_to_output_files, file_type='gzip')
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st.write('I am here', sasa_val)
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st.write(list(filter(None,k.split(' ')))[5])
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if wt == threeToOne(residue):
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sasa = str(list(filter(None,k.split(' ')))[5]).strip('\n')
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st.write('11')
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elif wt != threeToOne(residue):
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sasa = str(list(filter(None,k.split(' ')))[5]).strip('\n') + '*'
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st.write('12')
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else:
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sasa = 'nan'
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st.write('13')
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st.write('1')
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st.write('2')
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st.write('3')
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st.write('4')
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st.write('5')
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else:
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sasa = 'nan'
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st.write('6')
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#sasa_val = sasa('alphafold', 'nan', uniprotID, sasa_pos, uniprot_matched.at[i, 'wt'], mode,
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# path_to_output_files, file_type='gzip')
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st.write('I am here', sasa_val)
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