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e9fe6ca
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Parent(s):
df7efe5
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
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@@ -374,7 +374,7 @@ def alphafold(input_set, mode, impute):
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st.write('-----')
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st.write('')
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mod = 1
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name = '
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('PATH')
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st.write(pdb_path)
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@@ -390,8 +390,8 @@ def alphafold(input_set, mode, impute):
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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#pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-
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-
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with gzip.open(pdb_path, mode="rt") as f:
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file_content = f.read()
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st.write('-----')
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st.write('')
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mod = 1
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name = 'A0A075B6H7'
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('PATH')
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st.write(pdb_path)
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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#pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-A0A075B6H7-F1-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('NP')
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with gzip.open(pdb_path, mode="rt") as f:
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file_content = f.read()
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