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@michellemli
README.md
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pinnacle = PINNACLE()
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embeds = pinnacle.get_embeds()
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We share here
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https://colab.research.google.com/drive/14WeNbDNyDi_45hFayBMtt2MBOvhyRRvy?usp=sharing
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## TDC Citation
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```
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##
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pinnacle = PINNACLE()
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embeds = pinnacle.get_embeds()
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```
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We also share here the code used to benchmark PINNACLE on the TDC.scDTI task.
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https://colab.research.google.com/drive/14WeNbDNyDi_45hFayBMtt2MBOvhyRRvy?usp=sharing
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## TDC Citation
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}
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```
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## Additional Citations
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* Li, Michelle, et al. “Contextual AI models for single-cell protein biology” Nature Methods (2024)
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## Model Homepage
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https://huggingface.co/spaces/michellemli/PINNACLE
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## Model Github
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https://github.com/mims-harvard/PINNACLE
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## Dataset
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Dataset entry in Therapeutics Data Commons for single-cell drug-target nomination https://tdcommons.ai/multi_pred_tasks/scdti/
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