| | --- |
| | license: mit |
| | datasets: |
| | - ncbi/pubmed |
| | language: |
| | - en |
| | tags: |
| | - medical |
| | - biology |
| | - code |
| | --- |
| | # Model Card: Journal Retrieval Code Model |
| |
|
| | ## Model Description |
| | - **Model Name**: Journal Retrieval Code Model |
| | - **Model Architecture**: Biopython-based data extraction and retrieval |
| | - **Intended Use**: Extracts and retrieves journal data from PubMed articles using PM IDs. |
| | - **License**: MIT License |
| |
|
| | ## Training Data |
| | - **Dataset**: The model was used on PubMed articles data. |
| | - **Data Preprocessing**: Data was preprocessed by extracting relevant fields such as abstract, title, journal, language, year, and month. |
| |
|
| | ## Training Procedure |
| | - **Hyperparameters**: N/A |
| | - **Training Duration**: N/A |
| | - **Compute Resources**: N/A |
| |
|
| | ## Evaluation |
| | - **Metrics**: Accuracy of data retrieval and parsing |
| | - **Results**: N/A |
| | - **Evaluation Data**: Various PM IDs provided by users. |
| |
|
| | ## Intended Use Cases |
| | - **Primary Use Case**: Academic research, systematic reviews, and meta-analyses. |
| | - **Secondary Use Cases**: General data extraction for biomedical research. |
| | - **Misuse**: Not suitable for extracting data outside the PubMed database. May not handle edge cases well. |
| |
|
| | ## Limitations |
| | - **Known Limitations**: Only works with PubMed data and requires valid PM IDs. |
| | - **Potential Biases**: Relies on the availability and accuracy of PubMed's data. |
| |
|
| | ## How to Use |
| | ### Installation |
| | Install the necessary dependencies: |
| | ```bash |
| | pip install biopython pandas huggingface_hub |
