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36,919
fixed capitalization on ecosystem.rst
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2020-10-06T16:47:34Z
2020-10-06T17:30:15Z
2020-10-06T16:51:50Z
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null
Fixed capitalization on doc/source/ecosystem.rst
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0
2020-10-06T17:23:38Z
2020-10-06T19:23:53Z
2020-10-06T18:19:38Z
MEMBER
null
pandas\core\computation\pytables.py:46: error: Argument 1 to "__new__" of "object" has incompatible type "object"; expected "Type[object]" [arg-type] pandas\core\computation\pytables.py:189: error: Incompatible types in assignment (expression has type "Callable[[Any, int, Union[Mapping[str, str], Iterable[str], None], bool, bool, Optional[int]], str]", variable has type "partial[bytes]") [assignment] pandas\core\computation\pytables.py:262: error: Incompatible types in assignment (expression has type "Tuple[Any, ...]", variable has type "Optional[Tuple[Any, Any, Index]]") [assignment] pandas\core\computation\pytables.py:351: error: Incompatible types in assignment (expression has type "str", variable has type "None") [assignment] pandas\core\computation\pytables.py:357: error: Incompatible types in assignment (expression has type "str", variable has type "None") [assignment] pandas\core\computation\pytables.py:364: error: Incompatible types in assignment (expression has type "str", variable has type "None") [assignment]
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2020-10-06T17:47:20Z
2020-10-07T15:45:08Z
2020-10-07T14:56:43Z
MEMBER
null
pandas\core\groupby\ops.py:889: error: Need type annotation for 'sdata' [var-annotated]
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DOC: code example isn't formatted in `pandas.DataFrame.to_sql`
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0
2020-10-06T18:01:16Z
2020-10-06T23:04:34Z
2020-10-06T23:04:34Z
CONTRIBUTOR
null
#### Location of the documentation The code example in [pandas.DataFrame.to_sql](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.to_sql.html?highlight=to_sql#pandas.DataFrame.to_sql) isn't formatted properly. (it's the example that inserts User 4 and User 5 into the db) **Note**: You can check the latest versions of the docs on `master` [here](https://pandas.pydata.org/docs/dev/). #### Documentation problem ![image](https://user-images.githubusercontent.com/29909203/95242497-1d361480-07c4-11eb-9dd5-fa1eea90413f.png) oh no, the code isn't formatted correctly! #### Suggested fix for documentation The reason is there's no blank line before the code snippet, see: https://github.com/pandas-dev/pandas/blob/b58ee5779583b31de513b3d5c12f5c69c035e920/pandas/core/generic.py#L2692-L2695 Add a blank line above the code snippet :), i have a PR in progress
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DOC: add newline to fix code block format in `pandas.DataFrame.to_sql`
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1
2020-10-06T18:02:41Z
2020-10-07T02:48:19Z
2020-10-06T23:04:35Z
CONTRIBUTOR
null
- [x] closes #36922 - [x] tests added / passed n/a (didn't add any new tests/change code) - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry not sure if i need to add a whatsnew entry to 1.1.4 or 1.2.0... would love to get a hacktoberfest tag if your org supports this. #36837
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715,949,188
MDExOlB1bGxSZXF1ZXN0NDk4NzczOTEy
36,924
TYP: check_untyped_defs core.indexes.base
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4
2020-10-06T19:05:51Z
2020-10-10T16:05:47Z
2020-10-10T15:43:15Z
MEMBER
null
pandas\core\indexes\base.py:975: error: Argument 1 to "format_object_attrs" has incompatible type "Index"; expected "Sequence[Any]" [arg-type] pandas\core\indexes\base.py:1612: error: "Index" has no attribute "levels"; maybe "nlevels"? [attr-defined] pandas\core\indexes\base.py:1613: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:3763: error: "Index" has no attribute "levels"; maybe "nlevels"? [attr-defined] pandas\core\indexes\base.py:3779: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:3787: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:3790: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:3793: error: "Index" has no attribute "levels"; maybe "nlevels"? [attr-defined] pandas\core\indexes\base.py:3837: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:3840: error: "Index" has no attribute "codes" [attr-defined] pandas\core\indexes\base.py:4807: error: Too many arguments for "get_indexer_non_unique" of "Index" [call-arg] pandas\core\indexes\base.py:5403: error: Cannot assign to a method [assignment] pandas\core\indexes\base.py:5404: error: Cannot assign to a method [assignment] pandas\core\indexes\base.py:5405: error: Unsupported left operand type for < ("Type[Index]") [operator] pandas\core\indexes\base.py:5406: error: Unsupported left operand type for > ("Type[Index]") [operator] pandas\core\indexes\base.py:5407: error: Unsupported left operand type for <= ("Type[Index]") [operator] pandas\core\indexes\base.py:5408: error: Unsupported left operand type for >= ("Type[Index]") [operator] pandas\core\indexes\base.py:5415: error: Unsupported left operand type for + ("Type[Index]") [operator] pandas\core\indexes\base.py:5416: error: "Type[Index]" has no attribute "__radd__" [attr-defined] pandas\core\indexes\base.py:5417: error: Unsupported left operand type for - ("Type[Index]") [operator] pandas\core\indexes\base.py:5418: error: "Type[Index]" has no attribute "__rsub__" [attr-defined] pandas\core\indexes\base.py:5419: error: "Type[Index]" has no attribute "__rpow__" [attr-defined] pandas\core\indexes\base.py:5420: error: Unsupported left operand type for ** ("Type[Index]") [operator] pandas\core\indexes\base.py:5422: error: Unsupported left operand type for / ("Type[Index]") [operator] pandas\core\indexes\base.py:5423: error: "Type[Index]" has no attribute "__rtruediv__" [attr-defined] pandas\core\indexes\base.py:5425: error: Unsupported left operand type for % ("Type[Index]") [operator] pandas\core\indexes\base.py:5426: error: "Type[Index]" has no attribute "__rmod__" [attr-defined] pandas\core\indexes\base.py:5427: error: Unsupported left operand type for // ("Type[Index]") [operator] pandas\core\indexes\base.py:5428: error: "Type[Index]" has no attribute "__rfloordiv__" [attr-defined] pandas\core\indexes\base.py:5429: error: Unsupported left operand type for divmod ("Type[Index]") [operator] pandas\core\indexes\base.py:5430: error: "Type[Index]" has no attribute "__rdivmod__" [attr-defined] pandas\core\indexes\base.py:5431: error: Unsupported left operand type for * ("Type[Index]") [operator] pandas\core\indexes\base.py:5432: error: "Type[Index]" has no attribute "__rmul__" [attr-defined] pandas\core\indexes\base.py:5449: error: Unsupported operand type for unary - ("Type[Index]") [operator] pandas\core\indexes\base.py:5450: error: Unsupported operand type for unary + ("Type[Index]") [operator] pandas\core\indexes\base.py:5451: error: "Type[Index]" has no attribute "__abs__" [attr-defined] pandas\core\indexes\base.py:5452: error: "Type[Index]" has no attribute "__inv__" [attr-defined] pandas\core\indexes\base.py:5564: error: "Type[Index]" has no attribute "all" [attr-defined] pandas\core\indexes\base.py:5567: error: "Type[Index]" has no attribute "any" [attr-defined] pandas\core\indexes\base.py:5576: error: "Type[Index]" has no attribute "all" [attr-defined] pandas\core\indexes\base.py:5577: error: "Type[Index]" has no attribute "any" [attr-defined]
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715,951,465
MDExOlB1bGxSZXF1ZXN0NDk4Nzc1ODg2
36,925
CLN: Clean groupby tests
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1
2020-10-06T19:09:07Z
2020-10-10T23:31:40Z
2020-10-10T22:53:36Z
MEMBER
null
Found a few unused parts while moving tests for another PR
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715,964,632
MDU6SXNzdWU3MTU5NjQ2MzI=
36,926
BUG:dataframe to_sql using cx_Oracle
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2020-10-06T19:29:36Z
2021-06-06T17:52:21Z
null
NONE
null
- [x ] I have checked that this issue has not already been reported. - [ x] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python df.to_sql(name=table_name, con=engine, if_exists='append', index=False, chunksize=1000, dtype=dtype ) ``` #### Problem description If I run this code and the column names are greater than 30 I get: (cx_Oracle.DatabaseError) ORA-01008: not all variables bound It creates the table correctly, but the insert fails. In sqlalchemy, my engine is defined as: engine = create_engine(url, echo=False, max_identifier_length=128) If I shorten the long column names, it works perfectly. #### Expected Output #### Output of ``pd.show_versions()`` <details> [paste the output of ``pd.show_versions()`` here leaving a blank line after the details tag] '1.0.5' </details>
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715,987,726
MDExOlB1bGxSZXF1ZXN0NDk4ODA2NDI5
36,927
BUG: Fix duplicates in intersection of multiindexes
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18
2020-10-06T20:08:06Z
2020-12-02T12:21:57Z
2020-11-29T17:21:53Z
MEMBER
null
- [x] closes #36915 - [x] xref #31326 (closes the intersection part) - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry Seems like this was not introduced on purpose. Probably introduced in #31312
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36,928
BUG: `dict_keys` cannot be used as `pd.read_csv`'s `names` parameter
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2
2020-10-06T21:59:28Z
2020-10-10T17:45:01Z
2020-10-10T17:45:01Z
CONTRIBUTOR
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- #### Code Sample, a copy-pastable example `test.csv`: ```csv a,b 1,2 ``` ```python import pandas as pd data = {'a': 10, 'b': 20} pd.read_csv('test.csv', names=data.keys()) ``` Error: ``` Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/usr/local/lib/python3.8/dist-packages/pandas/io/parsers.py", line 691, in read_csv return _read(filepath_or_buffer, kwds) File "/usr/local/lib/python3.8/dist-packages/pandas/io/parsers.py", line 451, in _read _validate_names(kwds.get("names", None)) File "/usr/local/lib/python3.8/dist-packages/pandas/io/parsers.py", line 424, in _validate_names raise ValueError("Names should be an ordered collection.") ValueError: Names should be an ordered collection. ``` #### Problem description When a `dict_keys` object is passed, the keys aren't used as names. This is because `dict_keys` isn't list_like (https://github.com/pandas-dev/pandas/blob/4e553464f97a83dd2d827d559b74e17603695ca7/pandas/io/parsers.py#L423) or indexable, so the issue is understandable, but it would be nice to be able to pass `dict_keys` without issue. #### Expected Output Passing the dict keys to names shouldn't fail. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : 4e553464f97a83dd2d827d559b74e17603695ca7 python : 3.8.3.final.0 python-bits : 64 OS : Linux OS-release : 4.15.0-118-generic Version : #119-Ubuntu SMP Tue Sep 8 12:30:01 UTC 2020 machine : x86_64 processor : x86_64 byteorder : little LC_ALL : None LANG : None LOCALE : en_US.UTF-8 pandas : 1.2.0.dev0+632.g4e553464f numpy : 1.18.2 pytz : 2019.3 dateutil : 2.8.1 pip : 20.1.1 setuptools : 46.1.3 Cython : None pytest : None hypothesis : None sphinx : 1.6.7 blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : 0.999999999 pymysql : None psycopg2 : None jinja2 : 2.10 IPython : None pandas_datareader: None bs4 : 4.6.0 bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.2.1 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.4.1 sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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TYP: define Index.any, Index.all non-dynamically
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MEMBER
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry xref #31160, cc @simonjayhawkins This unearths 2.5 issues: 1) Index.any/all says that we pass *args/**kwargs to np.any/all, but we don't 1b) the RangeIndex methods don't have args/kwargs at all 2) the subclasses that disable any/all don't totally make sense. In particular it seems like Float64Index should support it and CategoricalIndex should support it iff `self.categories` supports it
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TYP/REF: define comparison methods non-dynamically
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2020-10-06T23:52:37Z
2020-10-07T15:16:20Z
2020-10-07T15:10:11Z
MEMBER
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry xref #31160, cc @simonjayhawkins @WillAyd This implements OpsMixin which is more mypy-friendly than the status quo, and uses it in Series, Index, and DatetimeLikeArrayMixin. There are a handful more places where it can be used in an upcoming pass. Will do the same for arithmetic/boolean ops if there is consensus that this is worth pursuing.
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REF/TYP: arrays.datetimelike
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4
2020-10-07T04:04:38Z
2020-10-10T22:45:23Z
2020-10-10T22:25:10Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry @simonjayhawkins this is still giving me two mypy complaints locally: ``` pandas/core/arrays/datetimelike.py:549: error: Too many arguments for "object" [call-arg] pandas/core/arrays/datetimelike.py:556: error: Too many arguments for "object" [call-arg] ``` These lines are both calls to `self._scalar_type(foo)` _scalar_type is annotated as `Type[DatetimeLikeScalar]`, which is a TypeVar for Period/Timestamp/Timedelta. Is there a non-ignoring solution here?
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716,193,076
MDExOlB1bGxSZXF1ZXN0NDk4OTc1OTk3
36,933
TST/CLN: roll_sum/mean/var/skew/kurt: simplification for non-monotonic indices
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19
2020-10-07T04:49:54Z
2020-10-25T22:09:55Z
2020-10-25T22:09:38Z
CONTRIBUTOR
null
- [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` The removed for-loop doesn't seem to be necessary (I hope this code is tested by an existing test). I feel like I'm missing an obvious reason why these for-loops are needed: looking at the code I don't think we need them and the tests also pass.
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MDExOlB1bGxSZXF1ZXN0NDk4OTc2NDcz
36,934
TST: RollingGroupby.count with closed specified
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0
2020-10-07T04:51:34Z
2020-10-09T20:05:17Z
2020-10-09T20:02:09Z
MEMBER
null
- [x] closes #35869 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry Closed by #31302
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36,935
TYP: clean unreachable code and duplicate test #27396
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1
2020-10-07T05:32:49Z
2020-10-10T17:44:04Z
2020-10-10T17:44:01Z
MEMBER
null
xref #27396 ``` pandas/tests/frame/test_to_csv.py:363: error: Right operand of 'or' is never evaluated [unreachable] pandas/tests/frame/test_to_csv.py:389: error: Right operand of 'or' is never evaluated [unreachable] pandas/tests/frame/test_to_csv.py:417: error: Right operand of 'or' is never evaluated [unreachable] pandas/tests/frame/test_to_csv.py:443: error: Right operand of 'or' is never evaluated [unreachable] ```
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MDU6SXNzdWU3MTYyNDEzODA=
36,936
BUG: loc with empty multiindex raises exception
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4
2020-10-07T06:32:33Z
2020-12-28T16:41:47Z
2020-12-28T16:41:47Z
NONE
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- Hi, last line of snippet throws an exception ``ValueError: operands could not be broadcast together with shapes (0,) (2,) (0,)`` ```python import pandas as pd arrays = [['val1', 'val1', 'val2'], ['val1', 'val1', 'val2']] index = pd.MultiIndex.from_arrays(arrays, names=('idx1', 'idx2')) df = pd.DataFrame([1, 2, 3], index=index, columns=['value']) df.loc[df[df['value'] == 0].index, :] = 4 ``` #### Problem description ``.loc`` raises error in case dataframe has duplicates in index. ``df[df['value'] == 0].index`` produces ``MultiIndex([], names=['idx1', 'idx2'])`` and it seems to be absolutely valid to put it into ``.loc`` method. #### Expected Output I expect ``.loc`` operation to make no changes to original ``df`` cause multiindex in ``.loc`` is empty. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.7.6.final.0 python-bits : 64 OS : Windows OS-release : 10 Version : 10.0.17763 machine : AMD64 processor : Intel64 Family 6 Model 142 Stepping 9, GenuineIntel byteorder : little LC_ALL : None LANG : None LOCALE : None.None pandas : 1.1.3 numpy : 1.19.1 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.2 setuptools : 46.0.0 Cython : None pytest : 6.0.1 hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : 1.3.0 lxml.etree : None html5lib : None pymysql : None psycopg2 : 2.8.5 (dt dec pq3 ext lo64) jinja2 : 2.11.1 IPython : 7.14.0 pandas_datareader: None bs4 : 4.9.1 bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.2.1 numexpr : None odfpy : None openpyxl : 3.0.4 pandas_gbq : None pyarrow : 1.0.1 pytables : None pyxlsb : 1.0.6 s3fs : None scipy : 1.4.1 sqlalchemy : 1.3.17 tables : None tabulate : None xarray : None xlrd : 1.2.0 xlwt : 1.3.0 numba : None </details>
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MDExOlB1bGxSZXF1ZXN0NDk5MDY3NTM5
36,937
BUG: GH36928 Allow dict_keys to be used as column names by read_csv
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2020-10-07T08:14:21Z
2020-10-12T14:08:39Z
2020-10-10T17:45:01Z
CONTRIBUTOR
null
- [x] closes #36928 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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36,938
DOC: Update dependency for to_markdown documentation
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2
2020-10-07T08:49:02Z
2020-10-17T10:21:31Z
2020-10-17T10:21:30Z
CONTRIBUTOR
null
Adding to the documentation that tabulate is required for to_markdown to be executed - [x] closes #xxxx - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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MDU6SXNzdWU3MTY0NzY3MzA=
36,939
BUG: Get_period_alias(offset_str) function behaves inconsistent
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2020-10-07T12:16:52Z
2021-08-13T04:08:23Z
null
NONE
null
`Get_period_alias(offset_str)` function behaves inconsistent --- ```python import pandas as pd print(pd.tseries.frequencies.get_period_alias('AS-JAN')) # works fine print(pd.tseries.frequencies.get_period_alias('AS-FEB')) # works fine # ... print(pd.tseries.frequencies.get_period_alias('W-MON')) # offset not removed print(pd.tseries.frequencies.get_period_alias('W-TUE')) # offset not removed # ... print(pd.tseries.frequencies.get_period_alias('A-JAN')) # offset not removed print(pd.tseries.frequencies.get_period_alias('A-FEB')) # offset not removed # ... ``` #### Problem description The `Get_period_alias(offset_str)` behaves inconsistent for different frequencies. See code sample for examples. The offset information (JAN, FEB, MON, TUE, ... ) should be removed. The issue should be easy to resolve by modifying the following lines: https://github.com/pandas-dev/pandas/blob/1f6710035a5295b2d3171ab811ae7ffca2344389/pandas/tseries/frequencies.py#L81-L87 #### Output: ``` A A W-MON W-TUE A-JAN A-FEB ``` #### Expected Output ``` A A W W A A ``` #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.7.0.final.0 python-bits : 64 OS : Windows OS-release : 10 Version : 10.0.17763 machine : AMD64 processor : Intel64 Family 6 Model 142 Stepping 10, GenuineIntel byteorder : little LC_ALL : None LANG : None LOCALE : None.None pandas : 1.1.3 numpy : 1.16.3 pytz : 2018.5 dateutil : 2.7.3 pip : 19.1.1 setuptools : 50.3.0 Cython : 0.28.5 pytest : 4.0.1 hypothesis : None sphinx : 2.2.1 blosc : None feather : None xlsxwriter : 1.1.0 lxml.etree : 4.2.5 html5lib : 1.0.1 pymysql : None psycopg2 : None jinja2 : 2.11.1 IPython : 6.5.0 pandas_datareader: None bs4 : 4.6.3 bottleneck : 1.2.1 fsspec : None fastparquet : None gcsfs : None matplotlib : 2.2.3 numexpr : 2.6.8 odfpy : None openpyxl : 3.0.3 pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.1.0 sqlalchemy : 1.3.13 tables : 3.4.4 tabulate : None xarray : None xlrd : 1.2.0 xlwt : 1.3.0 numba : 0.39.0 </details>
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36,940
REGR: DateOffset attributes update fails with no errors.
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4
2020-10-07T12:38:06Z
2020-10-08T21:10:10Z
2020-10-08T21:10:10Z
NONE
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. #### Code Sample ```python import pandas base = pandas.Timestamp("2020-01-01") offset = pandas.DateOffset(years=1) print(base + offset) >>> 2021-01-01 00:00:00 print(offset) >>> <DateOffset: years=1> offset.years = 5 print(base + offset) >>> 2021-01-01 00:00:00 print(offset) >>> <DateOffset: years=5> ``` #### Problem description I need to dynamically change some of the DateOffset attributes and just setting them seems like the most intuitive thing to do. And it seems to work: no error is raised and the attribute value is updated. When actually using it, though, the original value is used. #### Expected Output This is obviously due to the way the DateOffset is implemented, as a wrapper for cpython timedelta and dateutils relativedelta. The ideal outcome for this would be having the object update itself, but I can understand why the class is "static". The way it is, it may be better to inhibit attribute assignation instead of failing silently. Event better would be having some method to generate a new DateOffset with just a couple of fields changed. Depending on the change I may even be able to make the PR myself, once the desired behavior is clarified. :D #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : 2a7d3326dee660824a8433ffd01065f8ac37f7d6 python : 3.7.7.final.0 python-bits : 64 OS : Linux OS-release : 5.4.0-47-generic Version : #51~18.04.1-Ubuntu SMP Sat Sep 5 14:35:50 UTC 2020 machine : x86_64 processor : x86_64 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.2 numpy : 1.19.2 pytz : 2020.1 dateutil : 2.8.1 pip : 20.1.1 setuptools : 49.2.0.post20200714 Cython : None pytest : 6.1.1 hypothesis : None sphinx : 3.1.2 blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : 1.1 pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : None pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : None numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : None sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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36,941
BUG: series.eq(other) does not equal series == other when the series contain pd.NA
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2020-10-07T15:00:35Z
2020-10-16T18:43:13Z
null
CONTRIBUTOR
null
- [X] I have checked that this issue has not already been reported. - [X] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python # Using pd.NA: >>> import pandas as pd >>> df = pd.DataFrame(data=[[1, 1], [2, 2], [3, 3], [pd.NA, pd.NA]], columns=['a','b']) >>> df.a == df.b 0 True 1 True 2 True 3 False dtype: bool >>> df.a.eq(df.b) 0 False 1 False 2 False 3 False dtype: bool # Using np.nan instead of pd.NA: >>> import numpy as np >>> df_np = pd.DataFrame(data=[[1, 1], [2, 2], [3, 3], [np.nan, np.nan]], columns=['a','b']) >>> df_np.a.eq(df_np.b) 0 True 1 True 2 True 3 False dtype: bool ``` #### Problem description From the [documentation](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.Series.eq.html#pandas.Series.eq) of `Series.eq`: "Equivalent to `series == other`", I would expect `df.a == df.b` to yield the same result as `df.a.eq(df.b)`, but it doesn't when the series contain `pd.NA`. #### Expected Output `df.a.eq(df.b)` gives the same result as `df.a == df.b` even when the series contain `pd.NA`. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.8.5.final.0 python-bits : 64 OS : Linux OS-release : 5.4.0-48-generic Version : #52-Ubuntu SMP Thu Sep 10 10:58:49 UTC 2020 machine : x86_64 processor : x86_64 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.19.1 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.1 setuptools : 49.2.1.post20200802 Cython : None pytest : 6.0.1 hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : 1.3.1 lxml.etree : 4.5.1 html5lib : None pymysql : 0.10.0 psycopg2 : None jinja2 : 2.11.2 IPython : 7.15.0 pandas_datareader: None bs4 : None bottleneck : None fsspec : 0.7.4 fastparquet : None gcsfs : None matplotlib : 3.3.0 numexpr : None odfpy : None openpyxl : 3.0.4 pandas_gbq : None pyarrow : 1.0.0 pytables : None pyxlsb : None s3fs : None scipy : 1.5.2 sqlalchemy : 1.3.18 tables : None tabulate : 0.8.7 xarray : 0.15.1 xlrd : 1.2.0 xlwt : None numba : 0.48.0 </details>
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TST: astyp via loc to int64
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2020-10-07T15:22:10Z
2020-10-27T16:11:15Z
2020-10-27T15:13:54Z
CONTRIBUTOR
null
- [x] closes #31861 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` Adds a test for a special case of `astype` via `loc` to extension type Int64 when data has np.nan or pd.NA.
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REF/TYP: define methods non-dynamically for SparseArray
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2020-10-07T16:21:39Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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36,944
ENH: add string method remove prefix and suffix, python 3.9
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10
2020-10-07T16:24:25Z
2021-09-06T19:45:57Z
2021-09-06T19:45:57Z
CONTRIBUTOR
null
Opening this issue for discussion: Since python 3.9 is out, and we have the new [string methods](https://www.python.org/dev/peps/pep-0616/) `removeprefix` and `removesuffix`, it would be nice to add them to the pandas string methods as well ```python In [2]: import pandas as pd In [3]: df = pd.DataFrame({'A': ['str_string1', 'str_string2', 'str_string3']}) In [4]: print(df) A 0 str_string1 1 str_string2 2 str_string3 In [5]: df['A'].str.removeprefix('str_') Out[5]: 0 string1 1 string2 2 string3 Name: A, dtype: object ``` An argument not to add this is that it's pretty easily to achieve with `str.split`: ```python df['A'].str.split('_').str[-1] ```
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2020-10-07T16:28:49Z
2020-10-09T11:07:01Z
2020-10-09T11:06:58Z
MEMBER
null
xref #36531 This is to avoid problems where a dev's own system's Python points to Python2
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36,946
REGR: Make DateOffset immutable
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3
2020-10-07T17:11:21Z
2020-10-08T22:22:49Z
2020-10-08T21:10:10Z
MEMBER
null
- [x] closes #36940 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry I'm assuming this is a regression and not behavior we want?
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36,947
QST: Use object property as key?
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2020-10-07T17:13:32Z
2020-10-08T14:16:47Z
2020-10-08T14:16:47Z
NONE
null
Is there a way to use a property of an object as the key when providing the object to a DataFrame? I think the code makes clearer what I am looking for. ```python class Key: def __init__(self, name: str): self.name = name # Something like that def __pandas_key__(self): return self.name df = DataFrame({"col": [1,2,3,4]}) key = Key("col") df[key] # is [1,2,3,4] ```
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REGR: Dataframe.agg no longer accepts positional arguments as of v1.1.0
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0
2020-10-07T17:49:13Z
2020-10-09T13:32:56Z
2020-10-09T13:32:56Z
CONTRIBUTOR
null
Currently, passing any positional arguments to the `*args` parameter of `DataFrame.agg` fails with a `TypeError`, but the documented behavior is that positional and keyword arguments are passed on to the function that you are aggregating with. A minimal reproducer: ```python import pandas as pd def f(x, a): return x.sum() + a df = pd.DataFrame([1, 2]) print(df.agg(f, 0, 3)) ``` This is a regression introduced in v1.1.0, which was introduced in 433c9007781080658553fbef1a4d0c2813b404c0 (GH-34377), and it was mainly because the previous code only incidentally worked. Prior to the "offending" commit, [all `TypeErrors` were caught](https://github.com/pandas-dev/pandas/commit/433c9007781080658553fbef1a4d0c2813b404c0#diff-1e79abbbdd150d4771b91ea60a4e1cc7R7336-R7341) and `.agg` would fall back to `apply`. This was incidentally (as far as I can tell) catching the `TypeError` raised from the fact that the `self._aggregate` call passed `axis` as a keyword argument, so: ```python self._aggregate(func, axis=axis, *args, **kwargs) ... def aggregate(self, func, axis, *args, **kwargs): ... ``` This means that `aggregate` takes `func` and the first positional argument from `*args` as `func` and `axis`, then takes `axis=1` to be `axis`, raising `TypeError` because `axis` is specified twice. I believe the solution here is to pass `axis` to `self._aggregate` by position.
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DEPR: ObjectBlock.is_bool
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2020-10-07T17:52:35Z
2020-10-07T22:06:00Z
2020-10-07T22:05:56Z
MEMBER
null
- [ ] closes #xxxx - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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36,950
REGR: Allow positional arguments in DataFrame.agg
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5
2020-10-07T17:53:27Z
2020-10-09T13:33:42Z
2020-10-09T13:32:56Z
CONTRIBUTOR
null
Although `DataFrame.agg` is documented as accepting `func, axis, *args, **kwargs` with `*args` and `**kwargs` passed to `func`, passing positional arguments raises a TypeError. The reason for this is that the internal call to `self._aggregate` uses a keyword argument (axis) before passing *args and `**kwargs`, and as such the first positional argument is always interpreted as a second specification of `axis`, which raises TypeError. Prior to commit 433c9007781080658553fbef1a4d0c2813b404c0, TypeErrors were being suppressed, falling back to `self.apply`, which in v1.1.0 turned into an error. This fixes issue GH-36948. - [x] closes #36948 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry
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REGR: resample apply fails with KeyError/AttributeError for function that works on DataFrame but fails on Series
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4
2020-10-07T17:54:35Z
2020-10-21T15:12:56Z
2020-10-20T01:30:23Z
MEMBER
null
A resample `apply` accessing a column of the subsetted dataframe fails (bubbling up the error from first trying the function on a single column, i.e. a Series): ``` In [25]: df = pd.DataFrame({"col": range(10)}, index=pd.date_range("2012-01-01", periods=10, freq="20min")) In [26]: df.resample("H").apply(lambda group: len(group['col'].unique())) ... KeyError: 'col' In [27]: df.resample("H").apply(lambda group: len(group.col.unique())) ... AttributeError: 'Series' object has no attribute 'col' ``` This seems a regression, or was there a deliberate change in `apply` to only apply it on the columns and no longer on the full DataFrame ? cc @jbrockmendel
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36,952
CLN: dont special-case should_store, CategoricalBlock
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2020-10-07T17:55:18Z
2020-10-08T21:22:21Z
2020-10-08T21:13:42Z
MEMBER
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Moving towards avoiding special-casing pandas-internal EA subclasses.
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REGR: slicing an irregular DatetimeIndex with NaT fails with AssertionError
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MEMBER
null
This seems to be triggered in a very specific case, i.e. an irregular time series and a missing value as last element in the index: ``` increment = pd.Series(pd.to_timedelta([30.0, 30.1, 29.9, 30.0], unit='s')).cumsum() increment[-1] = None index = pd.Timestamp("2012-01-01 09:00") + increment df = pd.Series(range(len(index)), index=index).to_frame() In [11]: df["2012-01-01":"2012-01-05"] --------------------------------------------------------------------------- AssertionError Traceback (most recent call last) <ipython-input-11-ded270432cfc> in <module> ----> 1 df["2012-01-01":"2012-01-05"] ~/miniconda3/envs/pandas11/lib/python3.8/site-packages/pandas/core/frame.py in __getitem__(self, key) 2883 # either we have a slice or we have a string that can be converted 2884 # to a slice for partial-string date indexing -> 2885 return self._slice(indexer, axis=0) 2886 2887 # Do we have a (boolean) DataFrame? ~/miniconda3/envs/pandas11/lib/python3.8/site-packages/pandas/core/generic.py in _slice(self, slobj, axis) 3552 Slicing with this method is *always* positional. 3553 """ -> 3554 assert isinstance(slobj, slice), type(slobj) 3555 axis = self._get_block_manager_axis(axis) 3556 result = self._constructor(self._mgr.get_slice(slobj, axis=axis)) AssertionError: <class 'numpy.ndarray'> ```
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MDExOlB1bGxSZXF1ZXN0NDk5NDMxODEz
36,954
TYP/REF: use _cmp_method in EAs
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0
2020-10-07T18:14:48Z
2020-10-07T22:37:11Z
2020-10-07T22:23:29Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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36,955
Implement DataFrame.__array_ufunc__
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16
2020-10-07T18:36:37Z
2020-11-30T14:38:18Z
2020-11-25T20:52:40Z
CONTRIBUTOR
null
For some cases, this will preserve extension types of arrays by calling the ufunc blockwise. ```python In [1]: import pandas as pd; import numpy as np In [2]: df = pd.DataFrame({"A": pd.array([0, 1], dtype="Sparse")}) In [3]: np.sin(df).dtypes Out[3]: A Sparse[float64, nan] dtype: object ``` Implementation-wise, this was done by moving `Series.__array_ufunc__` to `NDFrame` and making it generic for Series / DataFrame. The DataFrame implementation goes through `BlockManager.apply(ufunc)`. We don't currently handle the multi-input case well for dataframes (aside from ufuncs that are implemented as dunder ops like `np.add`). For these, we fall back to the old implementation of converting to an ndarray and wrapping the result. This loses extension types. We also don't currently handle multi-output ufuncs (like `np.modf`). This would require a `BlockManager.apply` that returns a `Tuple[BlockManager]`, `nout` per input block. Maybe someday, but that's low priority. closes https://github.com/pandas-dev/pandas/issues/23743
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36,956
Add optional ./ci/code_checks.sh pre-commit
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1
2020-10-07T18:41:22Z
2021-07-16T11:22:56Z
2021-07-16T11:22:55Z
MEMBER
null
xref https://github.com/pandas-dev/pandas/pull/36722#issuecomment-704655928 > Is there a way to have an option in code_checks.sh that actually runs the appropriate pre-commit hook? that way we have a single source of truth, and you can actually still run them (of course have to avoid running these on the CI from the script as well)
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36,957
API: series.values EA or ndarray[object]?
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2020-10-07T19:43:52Z
2020-10-16T19:04:24Z
null
MEMBER
null
ATM `Series[categorical].values` gives a Categorical and `Series[sparse].values` gives a SparseArray. Interval, Period, and DatetimeTZ get cast to ndarray[object]. 3rd party EAs return the EA. We should choose one or the other. I have no real preference which.
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36,958
DOC: Add GCS as supported filesystem for read_parquet
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3
2020-10-07T20:51:41Z
2020-10-10T22:56:41Z
2020-10-10T22:56:37Z
CONTRIBUTOR
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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TYP: core.missing, ops.docstrings, internals.ops, internals.managers, io.html
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2020-10-07T20:57:55Z
2020-10-08T15:21:06Z
2020-10-08T08:56:45Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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ENH: typo in citing page
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2020-10-07T22:25:21Z
2020-10-07T23:34:11Z
2020-10-07T23:24:16Z
CONTRIBUTOR
null
Small typo in `citing.md`
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2020-10-07T22:51:43Z
2020-10-10T18:11:11Z
2020-10-10T17:31:16Z
MEMBER
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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BUG/API: tighter checks on DTI/TDI.equals
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2020-10-07T23:21:20Z
2020-10-08T21:27:59Z
2020-10-08T21:15:41Z
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- [x] closes #33531 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Also fixes `TimedeltaIndex(Categorical(tdi))` (which DatetimeIndex already gets right)
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36,963
BUG: Still getting blank when using `pandas.Series.to_string(index=False)`
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2020-10-07T23:27:51Z
2020-10-08T01:14:27Z
2020-10-08T00:08:06Z
NONE
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python import pandas print("pandas.__version__ == {:s}".format(pandas.__version__)) columns = ['name', 'age'] values = [ ['name_one', '31'], ['name_two', '32']] data_frame = pandas.DataFrame(values, columns=columns) # filter filtered = data_frame[(data_frame['name'] == 'name_one') & (data_frame['age'] == '31')] # single value comes with a blank at the beginning when running 0.24.0 print("==={:s}===".format(filtered.name.to_string(index=False))) ``` #### Problem description This was already reported by me on #24980 and supposedly fixed by PR #36094 but I keep getting the same result with pandas `1.1.3`. Using the sample code above the output is `=== name_one===` I might be missing something but I can't see what. #### Expected Output Using the sampe code provided I expect it to return `===name_one===` #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.6.12.final.0 python-bits : 64 OS : Linux OS-release : 4.9.0-1.el7.elrepo.x86_64 Version : #1 SMP Sun Dec 11 15:43:54 EST 2016 machine : x86_64 processor : x86_64 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.19.1 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.2 setuptools : 49.6.0.post20200814 Cython : 0.29.21 pytest : 6.0.2 hypothesis : None sphinx : 3.2.1 blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.16.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.3.1 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.5.2 sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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REF: de-duplicate skipna logic
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2020-10-08T04:41:24Z
2020-10-08T05:19:13Z
2020-10-08T05:19:13Z
MEMBER
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De-duplicate logic in handling skipna inside methods any() and all(). - [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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717,016,815
MDExOlB1bGxSZXF1ZXN0NDk5NjUzMTUz
36,969
DOC: make rename docs consistent
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1
2020-10-08T04:46:42Z
2020-10-08T22:08:33Z
2020-10-08T22:08:27Z
CONTRIBUTOR
null
Other doc text describing code end in a colon. - [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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36,970
DOC: improve description of the examplewhich dataframe has two rows
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2020-10-08T05:59:57Z
2020-10-11T19:38:46Z
2020-10-11T19:38:46Z
CONTRIBUTOR
null
#### Location of the documentation [this should provide the location of the documentation, e.g. "pandas.read_csv" or the URL of the documentation, e.g. "https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.mode.html"] **Note**: You can check the latest versions of the docs on `master` [here](https://pandas.pydata.org/docs/dev/). #### Documentation problem [this should provide a description of what documentation you believe needs to be fixed/improved] ... but the DataFrame has two rows. it is not clear which dataframe it refers to. #### Suggested fix for documentation [this should explain the suggested fix and **why** it's better than the existing documentation] ... but the resulting DataFrame has two rows.
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DOC: improve description of the example which dataframe has two rows
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2020-10-08T06:17:46Z
2020-10-11T19:39:17Z
2020-10-11T19:38:46Z
CONTRIBUTOR
null
improve description of the example which dataframe has two rows - [ ] closes #36970 - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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717,097,038
MDU6SXNzdWU3MTcwOTcwMzg=
36,972
BUG: warning when using colors 'CN'
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2020-10-08T07:28:24Z
2020-10-10T22:33:15Z
2020-10-10T22:33:15Z
MEMBER
null
- [x] I have checked that this issue has not already been reported. - [ ] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python import matplotlib.pyplot as plt import numpy as np import pandas as pd df = pd.DataFrame(np.random.randn(10, 3), columns=["a", "b", "c"]) df.plot(color='C0') plt.show() ``` #### Problem description On master branch when executing the code above the following warning is raised. ``` workspaces/pandas/pandas/plotting/_matplotlib/style.py:64: MatplotlibDeprecationWarning: Support for uppercase single-letter colors is deprecated since Matplotlib 3.1 and will be removed in 3.3; please use lowercase instead. [conv.to_rgba(c) for c in colors] ``` #### Expected Output Expected no warnings. Related issue: https://github.com/pandas-dev/pandas/issues/15516. The feature with "CN"-like colors was introduced in https://github.com/pandas-dev/pandas/pull/15873. I figured out that the problem lies in the line ``` maybe_color_cycle = _maybe_valid_colors(list(colors)) ``` So, if colors is "C0", then it is split into ["C", "0"]. I will fix it. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : None python : 3.8.3.final.0 python-bits : 32 OS : Windows OS-release : 10 machine : AMD64 processor : Intel64 Family 6 Model 158 Stepping 10, GenuineIntel byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : English_United States.1251 pandas : 1.0.5 numpy : 1.19.0 pytz : 2020.1 dateutil : 2.8.1 pip : 19.2.3 setuptools : 41.2.0 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : None IPython : None pandas_datareader: None bs4 : None bottleneck : None fastparquet : None gcsfs : None lxml.etree : None matplotlib : 3.2.2 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pytest : None pyxlsb : None s3fs : None scipy : 1.5.1 sqlalchemy : None tables : None tabulate : None xarray : None xlrd : 1.2.0 xlwt : None xlsxwriter : None numba : None </details>
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36,973
BUG: merge with MultiIndex including a CategoricalIndex returns wrong result when values are ordered specifically
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2020-10-08T08:03:50Z
2021-09-07T14:11:56Z
2021-09-07T14:11:56Z
NONE
null
#### Code Sample ```python import pandas as pd import numpy as np c1 = ['A', 'C', 'C', 'D' ] c2 = ['P2', 'P2', 'P1', 'P2'] df1 = pd.DataFrame({ 'id': c1[1:], 'p': c2[1:], 'a': np.arange(len(c1[1:])), }) df2 = pd.DataFrame({ 'id': c1[:-1], 'p': c2[:-1], 'd1': np.arange(10, 10+len(c1[:-1])), }) # ordered=True doesn't change the result pcat = pd.api.types.CategoricalDtype(categories=['P2', 'P1'], ordered=False) df1['p'] = df1['p'].astype(pcat) df2['p'] = df2['p'].astype(pcat) df1 = df1.set_index(['id', 'p']) df2 = df2.set_index(['id', 'p']) result = pd.merge(df1, df2, how='left', left_index=True, right_index=True) print(df1) print(df2) # ('C', 'P1') is in both dataframes and should therefore be merged accordingly print(result) ``` output: ``` a id p C P2 0 P1 1 D P2 2 d1 id p A P2 10 C P2 11 P1 12 a d1 id p C P2 0 11.0 P1 1 NaN ## <- Should be 12.0 D P2 2 NaN ``` #### Problem description The merge should not return NaN for the ('C', 'P1') value available in df2 for the left merge. This happens only: - when `p` is Categorical: leaving the column as object/string gives the right result - when category values are ordered as such (decreasing lexicographic order), **but** the `ordered` argument does not change the result - when the `id` values are as such: changing the 'C' in 'E' or anything "above" gives the right result (!) #### Expected Output ``` a d1 id p C P2 0 11.0 P1 1 12.0 D P2 2 NaN ``` #### First level of investigations Using a debugger and following the code execution: - when the error occurs: in Index.join(), it goes here to: https://github.com/pandas-dev/pandas/blob/master/pandas/core/indexes/base.py#L3537 ```python elif not self.is_unique or not other.is_unique: if self.is_monotonic and other.is_monotonic: return self._join_monotonic( ### <- HERE other, how=how, return_indexers=return_indexers ) ``` It seems it uses the wrong branch/case. - when the error does not occurs (e.g. swapping the values in the CategoricalDType declaration): https://github.com/pandas-dev/pandas/blob/master/pandas/core/indexes/base.py#L3578 ```python if return_indexers: if join_index is self: lindexer = None else: lindexer = self.get_indexer(join_index) if join_index is other: rindexer = None else: rindexer = other.get_indexer(join_index) ### <- HERE return join_index, lindexer, rindexer else: return join_index ``` This is how far I can get. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : 2a7d3326dee660824a8433ffd01065f8ac37f7d6 python : 3.8.3.final.0 python-bits : 64 OS : Windows OS-release : 10 Version : 10.0.18362 machine : AMD64 processor : Intel64 Family 6 Model 142 Stepping 10, GenuineIntel byteorder : little LC_ALL : None LANG : None LOCALE : fr_FR.cp1252 pandas : 1.1.2 numpy : 1.19.2 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.3 setuptools : 41.2.0 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.18.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : None numexpr : 2.7.1 odfpy : None openpyxl : 3.0.5 pandas_gbq : None pyarrow : 1.0.1 pytables : None pyxlsb : None s3fs : None scipy : None sqlalchemy : None tables : 3.6.1 tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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717,125,672
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BUG: InvalidIndexError when doing fillna with index that is repeated in df but not in fillna argument
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2020-10-08T08:13:58Z
2020-10-09T13:55:24Z
null
NONE
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- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- I get an InvalidIndexError on pandas 1.0.3 when doing fillna to a DataFrame with repeated indexes and using a DataFrame with the same index but without repetitions. I've also tested this use case in pandas 1.1.3 (latest as today) #### Code Sample, a copy-pastable example ```python df = pd.DataFrame({"a": 100*(list(range(10))+[None,None,None,None])}).sample(1000, random_state=12).set_index(pd.Series(list(range(100)) * 10, name = "my_index")) df_fillna = pd.DataFrame({"a": list(range(100))}, index=list(range(100))) df.fillna(df_fillna) ``` I expect to get a DF with each NaN with index i (there could be more than one) replaced with the unique value in df_fillna with index i but I get an InvalidIndexError. #### Problem description The output is an InvalidIndexError. #### Expected Output I would expect to replace each NaN with index i (there could be more than one) with the unique value in df_fillna with index i. So, the same as I get when doing this: ```python df = pd.DataFrame({"a": 100*(list(range(10))+[None,None,None,None])}).sample(1000, random_state=12).set_index(pd.Series(list(range(100)) * 10, name = "my_index")) df_fillna = pd.DataFrame({"a": list(range(100))*10}, index=list(range(100))*10) df.fillna(df_fillna) ``` #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : None python : 3.7.4.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 machine : x86_64 processor : i386 byteorder : little LC_ALL : en_US.UTF-8 LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.0.3 numpy : 1.18.0 pytz : 2019.3 dateutil : 2.8.1 pip : 20.2.3 setuptools : 39.1.0 Cython : 0.29.21 pytest : 6.0.2 hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : 0.9.3 psycopg2 : 2.8.2 (dt dec pq3 ext lo64) jinja2 : 2.11.2 IPython : 7.13.0 pandas_datareader: None bs4 : None bottleneck : None fastparquet : None gcsfs : None lxml.etree : None matplotlib : 3.3.1 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pytest : 6.0.2 pyxlsb : None s3fs : None scipy : 1.5.2 sqlalchemy : 1.2.16 tables : None tabulate : 0.8.3 xarray : None xlrd : None xlwt : None xlsxwriter : None numba : 0.51.2 </details>
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36,975
BUG: mask() and where() do not work pandas.core.arrays.boolean.BooleanDtype
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2020-10-08T09:58:38Z
2020-10-09T09:39:54Z
2020-10-08T13:31:22Z
MEMBER
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- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example This does not work: ```python >>> import pandas as pd >>> index = pd.MultiIndex.from_arrays([['a', 'a', 'b'], ['c', 'd', 'e']], names=['level1', 'level2']) >>> test = pd.DataFrame([[1, 2],[3, 4],[5, 6]], index=index, dtype=pd.UInt32Dtype()) >>> column_sums = test.sum(level='level1') >>> to_remove = column_sums < 100 >>> test.mask(to_remove, inplace=True, level='level1', axis=0, other=pd.NA) Traceback (most recent call last): File "<stdin>", line 1, in <module> File "./site-packages/pandas/core/generic.py", line 9034, in mask return self.where( File "./site-packages/pandas/core/generic.py", line 9004, in where return self._where( File "./site-packages/pandas/core/generic.py", line 8854, in _where new_data = self._mgr.putmask( File "./site-packages/pandas/core/internals/managers.py", line 547, in putmask return self.apply( File "./site-packages/pandas/core/internals/managers.py", line 406, in apply applied = getattr(b, f)(**kwargs) File "./site-packages/pandas/core/internals/blocks.py", line 1606, in putmask mask = _extract_bool_array(mask) File "./site-packages/pandas/core/internals/blocks.py", line 2869, in _extract_bool_array assert mask.dtype == bool, mask.dtype AssertionError: object ``` This does work: ```python >>> import pandas as pd >>> index = pd.MultiIndex.from_arrays([['a', 'a', 'b'], ['c', 'd', 'e']], names=['level1', 'level2']) >>> test = pd.DataFrame([[1, 2],[3, 4],[5, 6]], index=index, dtype=pd.UInt32Dtype()) >>> column_sums = test.sum(level='level1') >>> to_remove = (column_sums < 100).astype(bool) >>> test.mask(to_remove, inplace=True, level='level1', axis=0, other=pd.NA) >>> test.info() <class 'pandas.core.frame.DataFrame'> MultiIndex: 3 entries, ('a', 'c') to ('b', 'e') Data columns (total 2 columns): # Column Non-Null Count Dtype --- ------ -------------- ----- 0 0 0 non-null UInt32 1 1 0 non-null UInt32 dtypes: UInt32(2) memory usage: 346.0+ bytes ``` #### Problem description Using mask() or where() with the BooleanDtype as condition raises an AssertionError. #### Expected Output mask() and where() should work with both the bool and the pandas.core.arrays.boolean.BooleanDtype dtype. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.8.5.final.0 python-bits : 64 OS : Linux OS-release : 5.4.0-42-generic Version : #46-Ubuntu SMP Fri Jul 10 00:24:02 UTC 2020 machine : x86_64 processor : x86_64 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.19.2 pytz : 2020.1 dateutil : 2.8.1 pip : 20.0.2 setuptools : 44.0.0 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : None IPython : None pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : None numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : None sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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36,976
BUG:300
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1
2020-10-08T10:45:44Z
2020-10-08T13:34:09Z
2020-10-08T13:34:08Z
NONE
null
- [ ] I have checked that this issue has not already been reported. - [ ] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python # Your code here ``` #### Problem description [this should explain **why** the current behaviour is a problem and why the expected output is a better solution] #### Expected Output #### Output of ``pd.show_versions()`` <details> [paste the output of ``pd.show_versions()`` here leaving a blank line after the details tag] </details>
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717,241,738
MDU6SXNzdWU3MTcyNDE3Mzg=
36,977
rename function with agg
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2020-10-08T11:01:20Z
2020-10-08T18:10:47Z
2020-10-08T15:30:38Z
NONE
null
I just update to 1.1.3 and it seems that there is a problem (bug?) to rename function after an aggregate call. All the functions call are named <lambda> so I can't use rename as previously. How can I do to rename my function ? I cannot do anymore ``` .rename(columns={'<lambda_0>': 'function 0', '<lambda_1>': 'function 1',.... ``` (this is of course an example of functions names) ```python import pandas as pd pdf = pd.DataFrame([[4, 9]] * 3, columns=['A', 'B']) pdf.agg(["sum", lambda df: df.sum(), lambda df: df.sum()]) ``` #### Output A B sum 12 27 <lambda> 12 27 <lambda> 12 27 #### Expected Output A B sum 12 27 <lambda_0> 12 27 <lambda_1> 12 27 #### Output of ``pd.show_versions()`` INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.8.5.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Mon Aug 31 22:12:52 PDT 2020; root:xnu-6153.141.2~1/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : en_US.UTF-8 LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.19.1 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.3 setuptools : 50.3.0.post20201006 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : 4.5.2 html5lib : 1.1 pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.18.1 pandas_datareader: 0.9.0 bs4 : 4.9.1 bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.3.1 numexpr : None odfpy : None openpyxl : 3.0.5 pandas_gbq : None pyarrow : 0.15.1 pytables : None pyxlsb : None s3fs : None scipy : 1.5.0 sqlalchemy : None tables : None tabulate : 0.8.7 xarray : 0.16.1 xlrd : 1.2.0 xlwt : None numba : None <details> [paste the output of ``pd.show_versions()`` here leaving a blank line after the details tag]
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717,243,198
MDExOlB1bGxSZXF1ZXN0NDk5ODM4NjYx
36,978
CI Upgrade isort in pre-commit
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6
2020-10-08T11:03:24Z
2020-10-08T17:43:10Z
2020-10-08T17:42:46Z
CONTRIBUTOR
null
- xref #36879 ```console (base) root@ada0229371a4:/home/pandas-tazminia# pre-commit autoupdate && pre-commit run --all Updating https://github.com/python/black ... [INFO] Initializing environment for https://github.com/python/black. already up to date. Updating https://gitlab.com/pycqa/flake8 ... [INFO] Initializing environment for https://gitlab.com/pycqa/flake8. already up to date. Updating https://github.com/PyCQA/isort ... [INFO] Initializing environment for https://github.com/PyCQA/isort. updating 5.2.2 -> 5.6.0. Updating https://github.com/asottile/pyupgrade ... [INFO] Initializing environment for https://github.com/asottile/pyupgrade. already up to date. Updating https://github.com/pre-commit/pygrep-hooks ... [INFO] Initializing environment for https://github.com/pre-commit/pygrep-hooks. already up to date. Updating https://github.com/asottile/yesqa ... [INFO] Initializing environment for https://github.com/asottile/yesqa. already up to date. Updating https://github.com/pre-commit/pre-commit-hooks ... [INFO] Initializing environment for https://github.com/pre-commit/pre-commit-hooks. already up to date. [INFO] Initializing environment for https://gitlab.com/pycqa/flake8:flake8-comprehensions>=3.1.0. [INFO] Installing environment for https://github.com/python/black. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://gitlab.com/pycqa/flake8. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://gitlab.com/pycqa/flake8. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://github.com/PyCQA/isort. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://github.com/asottile/pyupgrade. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://github.com/asottile/yesqa. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... [INFO] Installing environment for https://github.com/pre-commit/pre-commit-hooks. [INFO] Once installed this environment will be reused. [INFO] This may take a few minutes... black....................................................................Passed flake8...................................................................Passed flake8-pyx...............................................................Passed flake8-pxd...............................................................Passed isort....................................................................Passed pyupgrade................................................................Passed rst ``code`` is two backticks............................................Passed Generate pip dependency from conda.......................................Passed Strip unnecessary `# noqa`s..............................................Passed Fix End of Files.........................................................Passed ```
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MDExOlB1bGxSZXF1ZXN0NDk5ODU0MjY0
36,979
CLN: re-wrap docstrings in pandas\compat\numpy\function.py
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2020-10-08T11:31:06Z
2020-10-10T19:43:44Z
2020-10-10T17:32:46Z
MEMBER
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36,980
BUG: Pandas closes user-provided file handles that it doesn't own.
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3
2020-10-08T12:33:43Z
2020-11-04T04:09:17Z
2020-11-04T04:09:17Z
NONE
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- `read_csv` closes user-provided file handles in specific cases. In particular, if we pass a `BytesIO` or a file opened in binary mode, **and** pass an `encoding` kwarg. If the `encoding` kwarg is not passed, pandas does not close the file handle (as expected). Much earlier (in 2016) a related [issue](https://github.com/pandas-dev/pandas/issues/14418) has been reported and fixed. The test cases that were mentioned there still pass today, but only in case the file handle is opened in binary mode & the `encoding` kwarg is passed. (version `1.1.2` & python `3.8.5`) #### Code Sample, a copy-pastable example ```python import sys import pandas from io import BytesIO, StringIO print(f'Python version: {sys.version}') print(f'pandas version: {pandas.__version__}') string_io = StringIO('a,b\n1,2') bytes_io_1 = BytesIO(b'a,b\n1,2') bytes_io_2 = BytesIO(b'a,b\n1,2') pandas.read_csv(string_io) print(f'Was StringIO closed? - {string_io.closed}') pandas.read_csv(bytes_io_1) print(f'Was BytesIO closed when encoding is NOT passed? - {bytes_io_1.closed}') pandas.read_csv(bytes_io_2, encoding='utf-8') print(f'Was BytesIO closed when encoding is passed? - {bytes_io_2.closed}') ``` prints: ``` Python version: 3.8.5 (v3.8.5:580fbb018f, Jul 20 2020, 12:11:27) [Clang 6.0 (clang-600.0.57)] pandas version: 1.1.2 Was StringIO closed? - False Was BytesIO closed when encoding is NOT passed? - False Was BytesIO closed when encoding is passed? - True ^ ``` #### Problem description Expectation is that pandas should never close user-provided handles. If pandas didn't open the file, then it doesn't own it & therefore shouldn't close it. #### Expected Output I would expect the script above to output: ``` Python version: 3.8.5 (v3.8.5:580fbb018f, Jul 20 2020, 12:11:27) [Clang 6.0 (clang-600.0.57)] pandas version: 1.1.2 Was StringIO closed? - False Was BytesIO closed when encoding is NOT passed? - False Was BytesIO closed when encoding is passed? - False ``` #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : d9fff2792bf16178d4e450fe7384244e50635733 python : 3.8.5.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Thu Jun 18 20:49:00 PDT 2020; root:xnu-6153.141.1~1/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : en_US.UTF-8 LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.0 numpy : 1.17.2 pytz : 2020.1 dateutil : 2.7.3 pip : 20.2.3 setuptools : 40.7.1 Cython : 0.29.7 pytest : 4.6.5 hypothesis : 4.55.2 sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : 4.5.2 html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.18.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : 0.8.2 fastparquet : None gcsfs : None matplotlib : None numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : 0.3.5 scipy : 1.5.2 sqlalchemy : 1.3.10 tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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717,309,849
MDExOlB1bGxSZXF1ZXN0NDk5ODkzNzU0
36,981
BUG: fix matplotlib warning on CN color
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10
2020-10-08T12:42:03Z
2020-10-20T11:37:15Z
2020-10-10T22:33:16Z
MEMBER
null
- [ ] closes #36972 - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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36,982
FIX: fix cleanup warnings for errorbar timeseries
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12
2020-10-08T14:52:03Z
2020-10-10T18:11:39Z
2020-10-10T17:33:48Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Currently in ``pandas/tests/plotting/tests_frame.py`` there are several warnings emitted. ``` pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_mpl2_color_cycle_str /workspaces/pandas/pandas/plotting/_matplotlib/style.py:64: MatplotlibDeprecationWarning: Support for uppercase single-letter colors is deprecated since Matplotlib 3.1 and will be removed in 3.3; please use lowercase instead. [conv.to_rgba(c) for c in colors] pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_plot pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_plot pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_plot pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_timeseries pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_timeseries pandas/tests/plotting/test_frame.py::TestDataFramePlots::test_errorbar_timeseries /workspaces/pandas/pandas/plotting/_matplotlib/__init__.py:61: UserWarning: To output multiple subplots, the figure containing the passed axes is being cleared plot_obj.generate() -- Docs: https://docs.pytest.org/en/stable/warnings.html ``` This PR handles warnings in ``test_errorbar_timeseries``. If this approach is considered reasonable by the reviewers, then I will do the same for ``test_errorbar_plot`` as well as other similar warnings among the plotting-related tests.
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MDU6SXNzdWU3MTc0NDc3ODM=
36,983
BUG: Index of an empty Series cannot be compared to a Timestamp anymore
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2020-10-08T15:27:56Z
2020-10-10T21:26:12Z
2020-10-10T21:15:42Z
CONTRIBUTOR
null
- [Y] I have checked that this issue has not already been reported. - [Y] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- #### Code Sample, a copy-pastable example ```python def test_series_timestamp_comparison(): my_series = pd.Series([], dtype=np.float64) date = pd.Timestamp('2015-07-15 00:00:00') res = my_series.index < date assert res.dtype == bool assert len(res) == 0 ``` #### Problem description In pandas 1.1.2 the above test passes, while in 1.1.3 it throws an error on line 5: Error in 1.1.3: TypeError: '<' not supported between instances of 'numpy.ndarray' and 'Timestamp' As far as I can tell, this started to occur because of a change in pandas.core.indexes.base._make_comparison_op, which change was added by this PR: https://github.com/pandas-dev/pandas/pull/36440 My question is if the new behaviour is legit for the above comparison, is it expected? In 1.1.2 this comparison didn't fail, because it would end up in ``` else: with np.errstate(all="ignore"): result = op(self._values, np.asarray(other)) ``` which was changed to: ``` elif is_interval_dtype(self.dtype): with np.errstate(all="ignore"): result = op(self._values, np.asarray(other)) ``` and the else part started to use ops.comparison_op which now fails in the above example (since is_interval_dtype(self.dtype) is false for the above case). A bit more background: the above comparison is used when subselecting data in the series without knowing whether the input series has data in it or not. So e.g.: ``` my_series[my_series.index < date] = 0.4 ``` Apologies if this question has been raised, I couldn't find anything similar in Open Issues. #### Output of ``pd.show_versions()`` <details> python : 3.7.4.final.0 pandas : 1.1.3 numpy : 1.19.2 </details>
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36,984
BUG: replacing a string with None causes an unexpected forward fill
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2020-10-08T17:41:41Z
2021-08-13T04:23:35Z
null
NONE
null
- [X] I have checked that this issue has not already been reported. - [X] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python # Your code here df = pd.DataFrame(np.zeros((3, 3))) df.iloc[2, 2] = '' df = df.replace('', None) print(df.iloc[2, 2] == '') # prints False print(df.iloc[2, 2] == df.iloc[1, 2]) # prints True ``` #### Problem description [this should explain **why** the current behaviour is a problem and why the expected output is a better solution] #### Expected Output Replacing a string with a None should introduce a None, not forward fill the previous result. #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.6.5.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Thu Jun 18 20:49:00 PDT 2020; root:xnu-6153.141.1~1/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.19.2 pytz : 2018.9 dateutil : 2.8.1 pip : 20.2 setuptools : 49.2.0 Cython : None pytest : 5.4.3 hypothesis : None sphinx : 1.8.3 blosc : None feather : None xlsxwriter : None lxml.etree : 4.5.1 html5lib : None pymysql : None psycopg2 : None jinja2 : 2.10.1 IPython : 7.13.0 pandas_datareader: None bs4 : 4.9.0 bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.2.2 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.4.1 sqlalchemy : 1.3.16 tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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717,580,478
MDExOlB1bGxSZXF1ZXN0NTAwMTE4MDgw
36,985
CLN: move maybe_casted_values from pandas/core/frame.py to pandas/core/dtype/cast.py
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2020-10-08T18:49:26Z
2020-10-11T04:01:00Z
2020-10-10T22:33:41Z
MEMBER
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- [ ] closes #xxxx - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry xref #36876, #27370 (stale PR)
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717,582,655
MDU6SXNzdWU3MTc1ODI2NTU=
36,986
BUG: ExtensionArray `test_unstack` assumes missing values are nan
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0
2020-10-08T18:53:08Z
2020-10-08T22:01:44Z
2020-10-08T22:01:44Z
CONTRIBUTOR
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example Running pytest with this fixture: ```python import random import pytest from pandas_genomics import GenotypeDtype, GenotypeArray, Variant random.seed(1855) @pytest.fixture def data(): """Length-100 array for this type. * data[0] and data[1] should both be non missing * data[0] and data[1] should not be equal """ alleles = ['A', 'T', 'G'] variant = Variant(variant_id='rs12345', chromosome='chr1', coordinate=123456, alleles=alleles) genotypes = [variant.make_genotype('A', 'T'), variant.make_genotype('T', 'T')] for i in range(98): genotypes.append(variant.make_genotype(random.choice(alleles), random.choice(alleles))) return GenotypeArray(values=genotypes) class TestReshaping(base.BaseReshapingTests): pass ``` #### Problem description I'm working on an ExtensionArray as part of a package called [pandas-genomics](https://github.com/HallLab/pandas-genomics). I've almost got all of the ExtensionArray tests passing. It isn't possible to pass `test_unstack` without altering the test itself. For example, the `series-index1` test case fails this assertion: ```python expected = ser.astype(object).unstack(level=level) result = result.astype(object) self.assert_frame_equal(result, expected) ``` In this case, `result` is ``` A B a A/T <Missing> b T/T T/T ``` and `expected` is ``` A B a A/T NaN b T/T T/T ``` `<Missing>` is the na_value for my ExtensionDtype. I've confirmed that this is resolved by using fill_value to supply the na_value ```python expected = ser.astype(object).unstack(level=level, fill_value=data.dtype.na_value) ``` #### Expected Output Test passes #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.7.7.final.0 python-bits : 64 OS : Windows OS-release : 10 Version : 10.0.19041 machine : AMD64 processor : Intel64 Family 6 Model 42 Stepping 7, GenuineIntel byteorder : little LC_ALL : None LANG : None LOCALE : None.None pandas : 1.1.3 numpy : 1.19.2 pytz : 2020.1 dateutil : 2.8.1 pip : 19.2.3 setuptools : 41.2.0 Cython : None pytest : 5.4.3 hypothesis : None sphinx : 3.2.1 blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.18.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : None numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : None sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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MDExOlB1bGxSZXF1ZXN0NTAwMTIzMzky
36,987
Fix test_unstack
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5
2020-10-08T18:58:09Z
2020-10-09T15:46:31Z
2020-10-08T22:01:44Z
CONTRIBUTOR
null
The test was failing if the ExtensionDtype had an na_value that wasn't equivalent to nan - [x] closes #36986 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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MDExOlB1bGxSZXF1ZXN0NTAwMTI4NDQ4
36,988
DOC: Added indexing views to roadmap
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4
2020-10-08T19:08:16Z
2020-10-19T21:25:20Z
2020-10-19T21:24:26Z
CONTRIBUTOR
null
This adds the indexing copy vs. view proposal to the roadmap (#36195). Given the length of the proposal, I've included a summary in the main `roadmap.rst`, with a link to the full proposal in a second document. Here's the summary: The major change from the Google doc shared earlier is the recommendation for "Error on Write" over "Copy on Write". I think the proposal should recommend one over the other, and I think "error on write" is probably the way to go, but I'm fairly uncertain on this point. cc @pandas-dev/pandas-core
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2020-10-08T19:16:38Z
2020-10-10T16:24:50Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry cc @simonjayhawkins
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TYP: sas, stata, style
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2020-10-08T20:28:13Z
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BUG: MultiIndex loses category after .stack()
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2020-10-08T20:31:37Z
2021-03-10T13:55:50Z
2021-03-10T13:55:50Z
CONTRIBUTOR
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- #### Code Sample, a copy-pastable example ``` import pandas as pd columns = pd.MultiIndex.from_tuples( [('x', 1, 3), ('x', 2, 3), ('y', 1, 3), ('y', 2, 3)], names=['a', 'b', 'c']) columns = columns.set_levels( [columns.levels[i].astype('category') for i in range(0, 2)], level=[0, 1]) df = pd.DataFrame([[1, 2, 3, 4]], columns=columns) dtypes = df.columns.to_frame().dtypes assert isinstance(dtypes.a, pd.CategoricalDtype) assert isinstance(dtypes.b, pd.CategoricalDtype) df2 = df.stack(['a', 'b']) dtypes2 = df2.index.to_frame().dtypes assert isinstance(dtypes2.a, pd.CategoricalDtype) assert isinstance(dtypes2.b, pd.CategoricalDtype) # broken ``` #### Problem description Categorical types within a MultiIndex should be preserved after calling .stack(). #### Expected Output #### Output of ``pd.show_versions()`` <details> INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.7.3.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Mon Aug 31 22:12:52 PDT 2020; root:xnu-6153.141.2~1/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.18.4 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.3 setuptools : 40.8.0 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.16.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : 0.7.4 fastparquet : None gcsfs : None matplotlib : 3.3.0 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.5.2 sqlalchemy : None tables : None tabulate : None xarray : None xlrd : None xlwt : None numba : None </details>
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Backport PR #36946 on branch 1.1.x (REGR: Make DateOffset immutable)
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2020-10-08T21:11:31Z
2020-10-09T11:20:34Z
2020-10-09T11:20:34Z
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Backport PR #36946: REGR: Make DateOffset immutable
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Usually I avoid `strict=False` like the plague, but these are a PITA recently.
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2020-10-08T22:45:38Z
2020-10-10T20:04:36Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry We'll be able to use this in DataFrame too following #36843
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2020-10-08T22:47:56Z
2020-10-10T18:07:29Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Moves us closer to #33455
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2020-10-08T22:54:13Z
2021-11-20T23:21:18Z
2020-10-09T01:03:32Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry xref #33455, when i use the stub @simonjayhawkins suggested there and put `disallow_untyped_decorators = True` into setup.cfg, this PR gets us down to 27 errors, including 6 from pytest.mark.parametrize 3 from numba.jit 3 from AxisProperty
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2020-10-09T01:04:08Z
2020-11-04T04:13:30Z
2020-11-04T04:09:17Z
CONTRIBUTOR
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- [x] closes #36980 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry REF/BUG: de-duplicate all file handling in `TextReader` by calling `get_handle` in `CParserWrapper`. ~~When `TextReader` gets a string it uses memory mapping (it is given a file object in all other cases).~~ REF/TYP: The second commit adds a new return value to `get_handle` (whether the buffer is wrapped inside a TextIOWrapper: in that case we cannot close it, we need to detach it (and flush it if we wrote to it)). I made `get_handle` return a typed dataclass `HandleArgs` and made sure that all created handles are in `HandleArgs.created_handles` there is no need to close `HandleArgs.handle` (unless it is created by `get_filename_or_buffer`). I used asserts for mypy when I'm 100% certain about the type, otherwise I added mypy ignore statements. In the future it might be good to merge `get_handle` and `get_filename_or_buffer`.
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BUG: DataFrame.diff with dt64 and NaTs
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2020-10-09T02:20:07Z
2020-10-10T18:09:04Z
2020-10-10T17:40:57Z
MEMBER
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- [x] closes #32441 - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [x] whatsnew entry There's a related bug in algos.diff, but the elegant solution goes through the cython code, so im doing that in a separate branch.
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36,999
CLN: Move _aggregate and _aggregate_multiple_funcs to core.aggregation
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1
2020-10-09T02:52:36Z
2020-10-11T13:22:02Z
2020-10-09T14:39:39Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Renamed functions by removing underscores and renamed `self` argument to `obj`.
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37,000
BUG: Pandas Dataframe is converting float variable to integer
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2020-10-09T07:40:53Z
2020-10-09T11:39:24Z
2020-10-09T11:39:23Z
NONE
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- [ Done ] I have checked that this issue has not already been reported. - [ Done ] I have confirmed this bug exists on the latest version of pandas. - [ ] (optional) I have confirmed this bug exists on the master branch of pandas. --- **Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to reproduce your bug. #### Code Sample, a copy-pastable example ```python df_mle.at[words_of_bigram[0], words_of_bigram[1]] = (df_bigram.at[i,'BigramCount']/frequencies.at['Frequency',words_of_bigram[0]]) ``` #### Problem description When I assigned the answer of the division which is a decimal value ( like 0.5) then value stored in the df_mle variable is an integer (like 0). #### Expected Output print(df_mle.at[words_of_bigram[0], words_of_bigram[1]]) >>> 0.5 #### Output of ``pd.show_versions()`` <details> [paste the output of ``pd.show_versions()`` here leaving a blank line after the details tag] </details>
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37,001
VIS: Allow xlabel and ylabel in DataFrame.plot.scatter plot and hexbin plot
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4
2020-10-09T11:14:05Z
2020-10-14T17:54:11Z
2020-10-14T17:54:11Z
CONTRIBUTOR
null
- [x] I have checked that this issue has not already been reported. - [x] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- #### Code Sample ```python import numpy as np import pandas as pd import matplotlib.pyplot as plt import matplotlib as mpl ax = (pd.DataFrame(np.random.randn(100, 2), columns=['A','B']) .plot.scatter( x='A', y='B', xlabel='my x label', ylabel='my y label', ) ) ``` #### Problem description In #34223 (released in 1.1.0), the ability to set `xlabel` and `ylabel` in `DataFrame.plot()` was added. This works fine when calling `plot()` directly or `df.plot.line()`. When calling `df.plot.scatter()` with these args, you still get the index labels as the axis labels, instead of the strings you pass in. These args are not documented to be incompatible or unavailable on this function, and no error is printed. ![Actual Output](https://user-images.githubusercontent.com/1574403/95576518-7dc58b80-0a28-11eb-8e74-58864c47a802.png) #### Expected Output The plot's axis labels should be the strings provided, "my x label" and "my y label". #### Output of ``pd.show_versions()`` <details> ``` INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.8.5.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Sun Jul 5 00:43:10 PDT 2020; root:xnu-6153.141.1~9/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : None LANG : en_GB.UTF-8 LOCALE : en_GB.UTF-8 pandas : 1.1.3 numpy : 1.19.2 pytz : 2020.1 dateutil : 2.8.1 pip : 20.2.3 setuptools : 50.3.0 Cython : None pytest : None hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : None html5lib : None pymysql : None psycopg2 : None jinja2 : 2.11.2 IPython : 7.18.1 pandas_datareader: None bs4 : None bottleneck : None fsspec : None fastparquet : None gcsfs : None matplotlib : 3.3.2 numexpr : None odfpy : None openpyxl : None pandas_gbq : None pyarrow : None pytables : None pyxlsb : None s3fs : None scipy : 1.5.2 sqlalchemy : None tables : None tabulate : 0.8.7 xarray : None xlrd : None xlwt : None numba : None ``` </details>
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37,002
Backport PR #36911: BUG: RollingGroupby not respecting sort=False
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Backport PR #36911
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37,003
Backport PR #36753 on branch 1.1.x: BUG: Segfault with string Index when using Rolling after Groupby
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2020-10-09T11:54:20Z
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Backport PR #36753 on branch 1.1.x
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Backport PR #36950 on branch 1.1.x (REGR: Allow positional arguments in DataFrame.agg)
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2020-10-09T14:35:07Z
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Backport PR #36950: REGR: Allow positional arguments in DataFrame.agg
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BLD: remove blockslider #34014
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Part of #34014 xref: https://github.com/ivirshup/pandas/commit/2c17e72a9deffd8e0d8999b88a2e31c0a58c746c #34997 Impact on groupby ``` before after ratio [97877442] [a82d3773] <master^2> <libreduction-cython> + 5.07±0.06ms 43.8±1ms 8.65 groupby.Apply.time_scalar_function_single_col + 15.5±0.2ms 108±0.6ms 6.97 groupby.Apply.time_scalar_function_multi_col + 453±3ms 508±1ms 1.12 groupby.Apply.time_copy_overhead_single_col + 1.44±0.03s 1.61±0.01s 1.12 groupby.Apply.time_copy_function_multi_col - 26.0±0.7ms 23.4±0.2ms 0.90 groupby.Nth.time_frame_nth_any('float64') ``` Impact on index_cached_properties ``` before after ratio [97877442] [a82d3773] <master^2> <libreduction-cython> + 401±10ns 862±400ns 2.15 index_cached_properties.IndexCache.time_inferred_type('Int64Index') + 397±10ns 649±200ns 1.64 index_cached_properties.IndexCache.time_is_unique('Int64Index') + 1.01±0.03μs 1.31±0.2μs 1.30 index_cached_properties.IndexCache.time_values('DatetimeIndex') + 3.51±0.2μs 4.55±0.8μs 1.29 index_cached_properties.IndexCache.time_shape('CategoricalIndex') + 1.97±0.2μs 2.30±0.2μs 1.17 index_cached_properties.IndexCache.time_inferred_type('MultiIndex') + 1.75±0.04μs 2.02±0.2μs 1.15 index_cached_properties.IndexCache.time_shape('DatetimeIndex') - 1.99±0.3μs 1.58±0.2μs 0.79 index_cached_properties.IndexCache.time_values('UInt64Index') - 2.33±0.6μs 1.77±0.5μs 0.76 index_cached_properties.IndexCache.time_inferred_type('Float64Index') ``` No significant changes on frame_methods
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DEPR: treating bool-containing ObjectBlock as bool
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Add pandas-genomics to the ecosystem list
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- [x] closes #xxxx - [x] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry Added [as suggested here](https://github.com/pandas-dev/pandas/pull/36987#pullrequestreview-505157583).
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CLN: standardize values coercion in Blocks
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- [x] closes #19492 - [ ] tests added / passed - [x] passes `black pandas` - [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry
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REF/TYP: consistent return type for Block.replace
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry move some convert logic out of _replace_coerce to avoid an otherwise-duplicated method
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BUG: Incorrect data when modifying a dataframe column with +=
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2020-10-09T21:33:01Z
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- [X] I have checked that this issue has not already been reported. - [X] I have confirmed this bug exists on the latest version of pandas. - [x] (optional) I have confirmed this bug exists on the master branch of pandas. --- #### Code Sample, a copy-pastable example Get the column as a series and modify inplace with `+=`: ```python In [1]: import pandas as pd ...: df = pd.DataFrame({"col": [1 ,2 ,3, 4]}) ...: s = df["col"] ...: s += 1 ...: print(s) ...: print(df["col"]) ...: print(df[["col"]]) 0 2 1 3 2 4 3 5 Name: col, dtype: int64 0 2 1 3 2 4 3 5 Name: col, dtype: int64 col 0 1 1 2 2 3 3 4 ``` Modify the column directly with `+=`: ```python In [2]: import pandas as pd ...: df = pd.DataFrame({"col": [1 ,2 ,3, 4]}) ...: df["col"] += 1 ...: print(df["col"]) ...: print(df[["col"]]) 0 2 1 3 2 4 3 5 Name: col, dtype: int64 col 0 2 1 3 2 4 3 5 ``` #### Problem description The data in the column should be consistent whether accessed as `df["col"]` or `df[["col"]]`. #### Expected Output Either `+=` modifies the values in the dataframe column or it doesn't but `df["col"]` and `df[["col"]]` should show the same values. #### Output of ``pd.show_versions()`` ```python In [13]: pd.show_versions() INSTALLED VERSIONS ------------------ commit : db08276bc116c438d3fdee492026f8223584c477 python : 3.8.5.final.0 python-bits : 64 OS : Darwin OS-release : 19.6.0 Version : Darwin Kernel Version 19.6.0: Thu Jun 18 20:49:00 PDT 2020; root:xnu-6153.141.1~1/RELEASE_X86_64 machine : x86_64 processor : i386 byteorder : little LC_ALL : None LANG : en_US.UTF-8 LOCALE : en_US.UTF-8 pandas : 1.1.3 numpy : 1.18.5 pytz : 2020.1 dateutil : 2.8.1 pip : 20.1.1 setuptools : 47.1.0 Cython : 0.29.21 pytest : 5.4.3 hypothesis : None sphinx : None blosc : None feather : None xlsxwriter : None lxml.etree : 4.5.2 html5lib : None pymysql : 0.10.1 psycopg2 : 2.8.6 (dt dec pq3 ext lo64) jinja2 : 2.11.2 IPython : 7.14.0 pandas_datareader: None bs4 : None bottleneck : 1.3.2 fsspec : 0.8.3 fastparquet : None gcsfs : None matplotlib : 3.3.2 numexpr : 2.7.1 odfpy : None openpyxl : 3.0.5 pandas_gbq : None pyarrow : 1.0.1 pytables : None pyxlsb : None s3fs : 0.4.2 scipy : 1.4.1 sqlalchemy : 1.3.19 tables : 3.6.1 tabulate : 0.8.7 xarray : None xlrd : None xlwt : None numba : None ``` For master branch: ```python In [1]: import pandas as pd; pd.show_versions() INSTALLED VERSIONS ------------------ commit : 9787744272c13a1dcbbcdfc7daaae8cc73ac78a3 python : 3.8.5.final.0 ... pandas : 1.2.0.dev0+684.g978774427 ... ``` </details>
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37,012
DOC: pandas.Index.astype says it raises ValueError instead of TypeError
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2020-10-09T19:51:01Z
2020-10-10T07:40:52Z
2020-10-10T07:40:52Z
CONTRIBUTOR
null
#### Location of the documentation The documentation is located at https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.Index.astype.html #### Documentation problem The documentation says " When conversion is impossible, a ValueError exception is raised." However, checking the code it can be seen that a TypeError is raised instead of ValueError. #### Suggested fix for documentation Just change ValueError to TypeError in the docstring.
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37,013
DOC: pandas.Index.astype says it raises ValueError instead of TypeError
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0
2020-10-09T20:36:34Z
2020-10-10T07:41:00Z
2020-10-10T07:40:53Z
CONTRIBUTOR
null
- [X] closes #37012 - [X] passes pytest - [X] passes `black pandas` - [X] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
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37,014
DOC: Clean merging.rst
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2
2020-10-09T20:45:44Z
2020-10-10T22:46:54Z
2020-10-10T22:24:29Z
MEMBER
null
Closes #36777
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37,015
Call finalize in Series.str
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1
2020-10-09T20:56:04Z
2020-10-11T20:09:39Z
2020-10-10T22:25:59Z
CONTRIBUTOR
null
xref #28283
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ERR: Better error message for MultiIndex.astype
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1
2020-10-09T22:48:18Z
2020-10-10T02:36:19Z
2020-10-10T02:30:05Z
MEMBER
null
Error message could be nicer I think ```python TypeError: Setting <class 'pandas.core.indexes.multi.MultiIndex'> dtype to anything other than object is not supported ```
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REF/TYP: define NDFrame numeric methods non-dynamically
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2020-10-10T01:42:41Z
2020-10-10T16:31:15Z
2020-10-10T16:28:38Z
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- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry cc @simonjayhawkins along with #36989 this gets most of the generic.py mypy complaints (notwithstanding complaints about `cls.foo = foo` that can be addressed by changing to `setattr(cls, "foo", foo)`. it'd be nice to have a less-verbose way of pinning the docstrings. i haven't had any luck so far at making that work.
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MDExOlB1bGxSZXF1ZXN0NTAwODk0NjA0
37,018
CLN: require td64 in TimeDeltaBlock
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2020-10-10T02:36:55Z
2020-10-10T16:35:10Z
2020-10-10T16:33:48Z
MEMBER
null
- [ ] closes #xxxx - [ ] tests added / passed - [ ] passes `black pandas` - [ ] passes `git diff upstream/master -u -- "*.py" | flake8 --diff` - [ ] whatsnew entry only one place where the check currently fails, fixed in core.missing
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