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I_kwDODunzps5a32zd
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concatenate_datasets fails when two dataset with shards > 1 and unequal shard numbers
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[
"Hi ! Thanks for reporting :)\r\n\r\nI managed to reproduce the hub using\r\n```python\r\n\r\nfrom datasets import concatenate_datasets, Dataset, load_from_disk\r\n\r\nDataset.from_dict({\"a\": range(9)}).save_to_disk(\"tmp/ds1\")\r\nds1 = load_from_disk(\"tmp/ds1\")\r\nds1 = concatenate_datasets([ds1, ds1])\r\n\r\nDataset.from_dict({\"b\": range(6)}).save_to_disk(\"tmp/ds2\")\r\nds2 = load_from_disk(\"tmp/ds2\")\r\nds2 = concatenate_datasets([ds2, ds2, ds2])\r\n\r\nconcatenate_datasets([ds1, ds2], axis=1)\r\n```\r\nand I get\r\n```python\r\nTraceback (most recent call last): \r\n File \"test.py\", line 98, in <module>\r\n dds = concatenate_datasets([ds1, ds2], axis=1)\r\n File \"/Users/.../datasets/combine.py\", line 182, in concatenate_datasets\r\n return _concatenate_map_style_datasets(dsets, info=info, split=split, axis=axis)\r\n File \"/Users/.../datasets/arrow_dataset.py\", line 5499, in _concatenate_map_style_datasets\r\n table = concat_tables([dset._data for dset in dsets], axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1778, in concat_tables\r\n return ConcatenationTable.from_tables(tables, axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1483, in from_tables\r\n blocks = _extend_blocks(blocks, table_blocks, axis=axis)\r\n File \"/Users/.../datasets/table.py\", line 1477, in _extend_blocks\r\n result[i].extend(row_blocks)\r\nIndexError: list index out of range\r\n```\r\n\r\nIt appears to happen when the two datasets have a number of shards that is not the same"
] | 2023-01-08T17:01:52
| 2023-01-26T09:27:21
| 2023-01-26T09:27:21
|
NONE
| null | null | null | null |
### Describe the bug
When using `concatenate_datasets([dataset1, dataset2], axis = 1)` to concatenate two datasets with shards > 1, it fails:
```
File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/combine.py", line 182, in concatenate_datasets
return _concatenate_map_style_datasets(dsets, info=info, split=split, axis=axis)
File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 5499, in _concatenate_map_style_datasets
table = concat_tables([dset._data for dset in dsets], axis=axis)
File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1778, in concat_tables
return ConcatenationTable.from_tables(tables, axis=axis)
File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1483, in from_tables
blocks = _extend_blocks(blocks, table_blocks, axis=axis)
File "/home/xzg/anaconda3/envs/tri-transfer/lib/python3.9/site-packages/datasets/table.py", line 1477, in _extend_blocks
result[i].extend(row_blocks)
IndexError: list index out of range
```
### Steps to reproduce the bug
dataset = concatenate_datasets([dataset1, dataset2], axis = 1)
### Expected behavior
The datasets are correctly concatenated.
### Environment info
datasets==2.8.0
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I_kwDODunzps5a2jad
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|
load_dataset() cannot find dataset_info.json with multiple training runs in parallel
|
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[
"Hi ! It fails because the dataset is already being prepared by your first run. I'd encourage you to prepare your dataset before using it for multiple trainings.\r\n\r\nYou can also specify another cache directory by passing `cache_dir=` to `load_dataset()`.",
"Thank you! What do you mean by prepare it beforehand? I am unclear how to conduct dataset preparation outside of using the `load_dataset` function.",
"You can have a separate script that does load_dataset + map + save_to_disk to save your prepared dataset somewhere. Then in your training script you can reload the dataset with load_from_disk",
"Thank you! I believe I was running additional map steps after loading, resulting in the cache conflict. "
] | 2023-01-08T00:44:32
| 2023-01-19T20:28:43
| 2023-01-19T20:28:43
|
NONE
| null | null | null | null |
### Describe the bug
I have a custom local dataset in JSON form. I am trying to do multiple training runs in parallel. The first training run runs with no issue. However, when I start another run on another GPU, the following code throws this error.
If there is a workaround to ignore the cache I think that would solve my problem too.
I am using datasets version 2.8.0.
### Steps to reproduce the bug
1. Start training run of GPU 0 loading dataset from
```
load_dataset(
"json",
data_files=tr_dataset_path,
split=f"train",
download_mode="force_redownload",
)
```
2. While GPU 0 is training, start an identical run on GPU 1. GPU 1 will produce the following error:
```
Traceback (most recent call last):
File "/local-scratch1/data/mt/code/qq/train.py", line 198, in <module>
main()
File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1130, in __call__
return self.main(*args, **kwargs)
File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1055, in main
rv = self.invoke(ctx)
File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 1404, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/username/.local/lib/python3.8/site-packages/click/core.py", line 760, in invoke
return __callback(*args, **kwargs)
File "/local-scratch1/data/mt/code/qq/train.py", line 113, in main
load_dataset(
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/load.py", line 1734, in load_dataset
builder_instance = load_dataset_builder(
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/load.py", line 1518, in load_dataset_builder
builder_instance: DatasetBuilder = builder_cls(
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/builder.py", line 366, in __init__
self.info = DatasetInfo.from_directory(self._cache_dir)
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/datasets/info.py", line 313, in from_directory
with fs.open(path_join(dataset_info_dir, config.DATASET_INFO_FILENAME), "r", encoding="utf-8") as f:
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/spec.py", line 1094, in open
self.open(
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/spec.py", line 1106, in open
f = self._open(
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 175, in _open
return LocalFileOpener(path, mode, fs=self, **kwargs)
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 273, in __init__
self._open()
File "/home/username/miniconda3/envs/qq3/lib/python3.8/site-packages/fsspec/implementations/local.py", line 278, in _open
self.f = open(self.path, mode=self.mode)
FileNotFoundError: [Errno 2] No such file or directory: '/home/username/.cache/huggingface/datasets/json/default-43d06a4aedb25e6d/0.0.0/0f7e3662623656454fcd2b650f34e886a7db4b9104504885bd462096cc7a9f51/dataset_info.json'
```
### Expected behavior
Expected behavior: 2nd GPU training run should run the same as 1st GPU training run.
### Environment info
Copy-and-paste the text below in your GitHub issue.
- `datasets` version: 2.8.0
- Platform: Linux-5.4.0-120-generic-x86_64-with-glibc2.10
- Python version: 3.8.15
- PyArrow version: 9.0.0
- Pandas version: 1.5.2
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I_kwDODunzps5al7FA
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|
dataset map function could not be hash properly
|
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[
"Hi ! On macos I tried with\r\n- py 3.9.11\r\n- datasets 2.8.0\r\n- transformers 4.25.1\r\n- dill 0.3.4\r\n\r\nand I was able to hash `prepare_dataset` correctly:\r\n```python\r\nfrom datasets.fingerprint import Hasher\r\nHasher.hash(prepare_dataset)\r\n```\r\n\r\nWhat version of transformers do you have ? Can you try to call `Hasher.hash` on the the tokenizer and the feature extractor to see which one can't be hashed ?",
"Thanks for your prompt reply.\r\n\r\nI update datasets version to 2.8.0 and the warning is gong."
] | 2023-01-05T01:59:59
| 2023-01-06T13:22:19
| 2023-01-06T13:22:18
|
NONE
| null | null | null | null |
### Describe the bug
I follow the [blog post](https://huggingface.co/blog/fine-tune-whisper#building-a-demo) to finetune a Cantonese transcribe model.
When using map function to prepare dataset, following warning pop out:
`common_voice = common_voice.map(prepare_dataset,
remove_columns=common_voice.column_names["train"], num_proc=1)`
> Parameter 'function'=<function prepare_dataset at 0x000001D1D9D79A60> of the transform datasets.arrow_dataset.Dataset._map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed.
I read https://github.com/huggingface/datasets/issues/4521 and https://github.com/huggingface/datasets/issues/3178 but cannot solve the issue.
### Steps to reproduce the bug
```python
from datasets import load_dataset, DatasetDict
common_voice = DatasetDict()
common_voice["train"] = load_dataset("mozilla-foundation/common_voice_11_0", "zh-HK",
split="train+validation")
common_voice["test"] = load_dataset("mozilla-foundation/common_voice_11_0", "zh-HK",
split="test")
common_voice = common_voice.remove_columns(["accent", "age", "client_id", "down_votes", "gender", "locale", "path", "segment", "up_votes"])
from transformers import WhisperFeatureExtractor, WhisperTokenizer, WhisperProcessor
feature_extractor = WhisperFeatureExtractor.from_pretrained("openai/whisper-small")
tokenizer = WhisperTokenizer.from_pretrained("openai/whisper-small", language="chinese", task="transcribe")
processor = WhisperProcessor.from_pretrained("openai/whisper-small", language="chinese", task="transcribe")
from datasets import Audio
common_voice = common_voice.cast_column("audio", Audio(sampling_rate=16000))
def prepare_dataset(batch):
# load and resample audio data from 48 to 16kHz
audio = batch["audio"]
# compute log-Mel input features from input audio array
batch["input_features"] = feature_extractor(audio["array"],
sampling_rate=audio["sampling_rate"]).input_features[0]
# encode target text to label ids
batch["labels"] = tokenizer(batch["sentence"]).input_ids
return batch
common_voice = common_voice.map(prepare_dataset,
remove_columns=common_voice.column_names["train"], num_proc=1)
```
### Expected behavior
Should be no warning shown.
### Environment info
- `datasets` version: 2.7.0
- Platform: Windows-10-10.0.19045-SP0
- Python version: 3.9.12
- PyArrow version: 8.0.0
- Pandas version: 1.3.5
- dill version: 0.3.4
- multiprocess version: 0.70.12.2
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I_kwDODunzps5alkRh
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Datasets.from_sql() generates deprecation warning
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[
"Thanks for reporting @msummerfield. We are fixing it."
] | 2023-01-05T00:43:17
| 2023-01-06T10:59:14
| 2023-01-06T10:59:14
|
NONE
| null | null | null | null |
### Describe the bug
Calling `Datasets.from_sql()` generates a warning:
`.../site-packages/datasets/builder.py:712: FutureWarning: 'use_auth_token' was deprecated in version 2.7.1 and will be removed in 3.0.0. Pass 'use_auth_token' to the initializer/'load_dataset_builder' instead.`
### Steps to reproduce the bug
Any valid call to `Datasets.from_sql()` will produce the deprecation warning.
### Expected behavior
No warning.
The fix should be simply to remove the parameter `use_auth_token` from the call to `builder.download_and_prepare()` at line 43 of `io/sql.py` (it is set to `None` anyway, and is not needed).
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-4.15.0-169-generic-x86_64-with-glibc2.27
- Python version: 3.9.15
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
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[2.6.1][2.7.0] Upgrade `datasets` to fix `TypeError: can only concatenate str (not "int") to str`
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"I still get this error on 2.9.0\r\n<img width=\"1925\" alt=\"image\" src=\"https://user-images.githubusercontent.com/7208470/215597359-2f253c76-c472-4612-8099-d3a74d16eb29.png\">\r\n",
"Hi ! I just tested locally and or colab and it works fine for 2.9 on `sst2`.\r\n\r\nAlso the code that is shown in your stack trace is not present in the 2.9 source code - so I'm wondering how you installed `datasets` that could cause this ? (you can check by searching for `[0:{label_ids[-1] + 1}]` in the [2.9 codebase](https://github.dev/huggingface/datasets/tree/b5672a956d5de864e6f5550e493527d962d6ae55) - it doesn't find anything)\r\n\r\nAnyway you can try uninstalling `datasets` and install it again",
"For what it's worth, I've also gotten this error on 2.9.0, and I've tried uninstalling an reinstalling\r\n\r\n\r\nI'm very new to this package (I was following this tutorial: https://huggingface.co/docs/transformers/training), so there's a good chance I was doing something wrong 😅 but thought I'd pass along the feedback",
"@ntrpnr @mtwichel Did you install `datasets` with conda ?\r\n\r\nI suspect that `datasets` 2.9 on conda still have this issue for some reason. When I install `datasets` with `pip` I don't have this error.",
"> @ntrpnr @mtwichel Did you install datasets with conda ?\r\n\r\nI did yeah, I wonder if that's the issue",
"I just checked on conda at https://anaconda.org/HuggingFace/datasets/files\r\n\r\nand everything looks fine, I got\r\n```python\r\n\r\nf\"ClassLabel expected a value for all label ids [0:{int(label_ids[-1]) + 1}] but some ids are missing.\"\r\n```\r\nas expected in features.py line 1760 (notice the \"int()\") to not have the TypeError.\r\n\r\nFrom where on conda did you install `datasets` ? You should use the `HuggingFace` official channel\r\n\r\nedit: the conda-forge one [here](https://anaconda.org/conda-forge/datasets/files) seems ok as well",
"Could you also try this in your notebook ? In case your python kernel doesn't match the `pip` environment in your shell\r\n```python\r\nimport datasets; datasets.__version__\r\n```\r\nand\r\n```\r\n!which python\r\n```\r\n```python\r\nimport sys; sys.executable\r\n```",
"Mmmm, just a potential clue:\r\n\r\nWhere are you running your Python code? Is it the Spyder IDE?\r\n\r\nI have recently seen some users reporting conflicting Python environments while using Spyder...\r\n\r\nMaybe related:\r\n- #5487",
"Other potential clue:\r\n- Had you already imported `datasets` before pip-updating it? You should first update datasets, before importing it. Otherwise, you need to restart the kernel after updating it.",
"I installed `datasets` with Conda using `conda install datasets` and got this issue.\r\n\r\nThen I tried to reinstall using\r\n`\r\nconda install -c huggingface -c conda-forge datasets\r\n`\r\nThe issue is now fixed.",
"I'm still getting this error on 2.13.0"
] | 2023-01-04T15:10:04
| 2023-06-21T18:45:38
| null |
MEMBER
| null | null | null | null |
`datasets` 2.6.1 and 2.7.0 started to stop supporting datasets like IMDB, ConLL or MNIST datasets.
When loading a dataset using 2.6.1 or 2.7.0, you may this error when loading certain datasets:
```python
TypeError: can only concatenate str (not "int") to str
```
This is because we started to update the metadata of those datasets to a format that is not supported in 2.6.1 and 2.7.0
This change is required or those datasets won't be supported by the Hugging Face Hub.
Therefore if you encounter this error or if you're using `datasets` 2.6.1 or 2.7.0, we encourage you to update to a newer version.
For example, versions 2.6.2 and 2.7.1 patch this issue.
```python
pip install -U datasets
```
All the datasets affected are the ones with a ClassLabel feature type and YAML "dataset_info" metadata. More info [here](https://github.com/huggingface/datasets/issues/5275).
We apologize for the inconvenience.
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|
size_in_bytes the same for all splits
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[
"Hi @Breakend,\r\n\r\nIndeed, the attribute `size_in_bytes` refers to the size of the entire dataset configuration, for all splits (size of downloaded files + Arrow files), not the specific split.\r\nThis is also the case for `download_size` (downloaded files) and `dataset_size` (Arrow files).\r\n\r\nThe size of the Arrow files for a specific split can be accessed: e.g. size of the \"test\" split only\r\n```python\r\nds[\"train\"].info.splits[\"test\"].num_bytes\r\n```\r\n\r\nI agree this is confusing and maybe we should improve it."
] | 2023-01-03T20:25:48
| 2023-01-04T09:22:59
| null |
NONE
| null | null | null | null |
### Describe the bug
Hi, it looks like whenever you pull a dataset and get size_in_bytes, it returns the same size for all splits (and that size is the combined size of all splits). It seems like this shouldn't be the intended behavior since it is misleading. Here's an example:
```
>>> from datasets import load_dataset
>>> x = load_dataset("glue", "wnli")
Found cached dataset glue (/Users/breakend/.cache/huggingface/datasets/glue/wnli/1.0.0/dacbe3125aa31d7f70367a07a8a9e72a5a0bfeb5fc42e75c9db75b96da6053ad)
100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1097.70it/s]
>>> x["train"].size_in_bytes
186159
>>> x["validation"].size_in_bytes
186159
>>> x["test"].size_in_bytes
186159
>>>
```
### Steps to reproduce the bug
```
>>> from datasets import load_dataset
>>> x = load_dataset("glue", "wnli")
>>> x["train"].size_in_bytes
186159
>>> x["validation"].size_in_bytes
186159
>>> x["test"].size_in_bytes
186159
```
### Expected behavior
The expected behavior is that it should return the separate sizes for all splits.
### Environment info
- `datasets` version: 2.7.1
- Platform: macOS-12.5-arm64-arm-64bit
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
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Better integration of BIG-bench
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[
"Hi, I made my version : https://huggingface.co/datasets/tasksource/bigbench"
] | 2023-01-03T15:37:57
| 2023-02-09T20:30:26
| null |
MEMBER
| null | null | null | null |
### Feature request
Ideally, it would be nice to have a maintained PyPI package for `bigbench`.
### Motivation
We'd like to allow anyone to access, explore and use any task.
### Your contribution
@lhoestq has opened an issue in their repo:
- https://github.com/google/BIG-bench/issues/906
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| 5,402
|
Missing state.json when creating a cloud dataset using a dataset_builder
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[
"`load_from_disk` must be used on datasets saved using `save_to_disk`: they correspond to fully serialized datasets including their state.\r\n\r\nOn the other hand, `download_and_prepare` just downloads the raw data and convert them to arrow (or parquet if you want). We are working on allowing you to reload a dataset saved on S3 with `download_and_prepare` using `load_dataset` in #5281 \r\n\r\nFor now I'd encourage you to keep using `save_to_disk`",
"Thanks, I'll follow that issue. \r\n\r\nI was following the [cloud storage](https://huggingface.co/docs/datasets/filesystems) docs section and perhaps I'm missing some part of the flow; start with `load_dataset_builder` + `download_and_prepare`. You say I need an explicit `save_to_disk` but what object needs to be saved? the builder? is that related to the other issue?",
"Right now `load_dataset_builder` + `download_and_prepare` is to be used with tools like dask or spark, but `load_dataset` will support private cloud storage soon as well so you'll be able to reload the dataset with `datasets`.\r\n\r\nRight now the only function that can load a dataset from a cloud storage is `load_from_disk`, that must be used with a dataset serialized with `save_to_disk`."
] | 2023-01-03T13:39:59
| 2023-01-04T17:23:57
| null |
NONE
| null | null | null | null |
### Describe the bug
Using `load_dataset_builder` to create a builder, run `download_and_prepare` do upload it to S3. However when trying to load it, there are missing `state.json` files. Complete example:
```python
from aiobotocore.session import AioSession as Session
from datasets import load_from_disk, load_datase, load_dataset_builder
import s3fs
storage_options = {"session": Session()}
fs = s3fs.S3FileSystem(**storage_options)
output_dir = "s3://bucket/imdb"
builder = load_dataset_builder("imdb")
builder.download_and_prepare(output_dir, storage_options=storage_options)
load_from_disk(output_dir, fs=fs) # ERROR
# [Errno 2] No such file or directory: '/tmp/tmpy22yys8o/bucket/imdb/state.json'
```
As a comparison, if you use the non lazy `load_dataset`, it works and the S3 folder has different structure + state.json files. Example:
```python
from aiobotocore.session import AioSession as Session
from datasets import load_from_disk, load_dataset, load_dataset_builder
import s3fs
storage_options = {"session": Session()}
fs = s3fs.S3FileSystem(**storage_options)
output_dir = "s3://bucket/imdb"
dataset = load_dataset("imdb",)
dataset.save_to_disk(output_dir, fs=fs)
load_from_disk(output_dir, fs=fs) # WORKS
```
You still want the 1st option for the laziness and the parquet conversion. Thanks!
### Steps to reproduce the bug
```python
from aiobotocore.session import AioSession as Session
from datasets import load_from_disk, load_datase, load_dataset_builder
import s3fs
storage_options = {"session": Session()}
fs = s3fs.S3FileSystem(**storage_options)
output_dir = "s3://bucket/imdb"
builder = load_dataset_builder("imdb")
builder.download_and_prepare(output_dir, storage_options=storage_options)
load_from_disk(output_dir, fs=fs) # ERROR
# [Errno 2] No such file or directory: '/tmp/tmpy22yys8o/bucket/imdb/state.json'
```
BTW, you need the AioSession as s3fs is now based on aiobotocore, see https://github.com/fsspec/s3fs/issues/385.
### Expected behavior
Expected to be able to load the dataset from S3.
### Environment info
```
s3fs 2022.11.0
s3transfer 0.6.0
datasets 2.8.0
aiobotocore 2.4.2
boto3 1.24.59
botocore 1.27.59
```
python 3.7.15.
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[] | 2023-01-01T13:00:11
| 2023-01-02T07:21:52
| 2023-01-02T07:21:52
|
NONE
| null | null | null | null |
### Describe the bug
While trying to upload my image dataset of a CSV file type to huggingface by running the below code. The dataset consists of a little over 100k of image-caption pairs
### Steps to reproduce the bug
```
df = pd.read_csv('x.csv', encoding='utf-8-sig')
features = Features({
'link': Image(decode=True),
'caption': Value(dtype='string'),
})
#make sure u r logged in to HF
ds = Dataset.from_pandas(df, features=features)
ds.features
ds.push_to_hub("x/x")
```
I got the below error and It always stops at the same progress
```
100%|██████████| 4/4 [23:53<00:00, 358.48s/ba]
100%|██████████| 4/4 [24:37<00:00, 369.47s/ba]%|▍ | 1/22 [00:06<02:09, 6.16s/it]
100%|██████████| 4/4 [25:00<00:00, 375.15s/ba]%|▉ | 2/22 [25:54<2:36:15, 468.80s/it]
100%|██████████| 4/4 [24:53<00:00, 373.29s/ba]%|█▎ | 3/22 [51:01<4:07:07, 780.39s/it]
100%|██████████| 4/4 [24:01<00:00, 360.34s/ba]%|█▊ | 4/22 [1:17:00<5:04:07, 1013.74s/it]
100%|██████████| 4/4 [23:59<00:00, 359.91s/ba]%|██▎ | 5/22 [1:41:07<5:24:06, 1143.90s/it]
100%|██████████| 4/4 [24:16<00:00, 364.06s/ba]%|██▋ | 6/22 [2:05:14<5:29:15, 1234.74s/it]
100%|██████████| 4/4 [25:24<00:00, 381.10s/ba]%|███▏ | 7/22 [2:29:38<5:25:52, 1303.52s/it]
100%|██████████| 4/4 [25:24<00:00, 381.24s/ba]%|███▋ | 8/22 [2:56:02<5:23:46, 1387.58s/it]
100%|██████████| 4/4 [25:08<00:00, 377.23s/ba]%|████ | 9/22 [3:22:24<5:13:17, 1445.97s/it]
100%|██████████| 4/4 [24:11<00:00, 362.87s/ba]%|████▌ | 10/22 [3:48:24<4:56:02, 1480.19s/it]
100%|██████████| 4/4 [24:44<00:00, 371.11s/ba]%|█████ | 11/22 [4:12:42<4:30:10, 1473.66s/it]
100%|██████████| 4/4 [24:35<00:00, 368.81s/ba]%|█████▍ | 12/22 [4:37:34<4:06:29, 1478.98s/it]
100%|██████████| 4/4 [24:02<00:00, 360.67s/ba]%|█████▉ | 13/22 [5:03:24<3:45:04, 1500.45s/it]
100%|██████████| 4/4 [24:07<00:00, 361.78s/ba]%|██████▎ | 14/22 [5:27:33<3:17:59, 1484.97s/it]
100%|██████████| 4/4 [23:39<00:00, 354.85s/ba]%|██████▊ | 15/22 [5:51:48<2:52:10, 1475.82s/it]
Pushing dataset shards to the dataset hub: 73%|███████▎ | 16/22 [6:16:58<2:28:37, 1486.31s/it]Got disconnected from remote data host. Retrying in 5sec [1/20]
Got disconnected from remote data host. Retrying in 5sec [2/20]
Got disconnected from remote data host. Retrying in 5sec [3/20]
Got disconnected from remote data host. Retrying in 5sec [4/20]
Got disconnected from remote data host. Retrying in 5sec [5/20]
Got disconnected from remote data host. Retrying in 5sec [6/20]
Got disconnected from remote data host. Retrying in 5sec [7/20]
Got disconnected from remote data host. Retrying in 5sec [8/20]
Got disconnected from remote data host. Retrying in 5sec [9/20]
...
Got disconnected from remote data host. Retrying in 5sec [19/20]
Got disconnected from remote data host. Retrying in 5sec [20/20]
75%|███████▌ | 3/4 [24:47<08:15, 495.86s/ba]
Pushing dataset shards to the dataset hub: 73%|███████▎ | 16/22 [6:41:46<2:30:39, 1506.65s/it]
Output exceeds the size limit. Open the full output data in a text editor
---------------------------------------------------------------------------
ConnectionError Traceback (most recent call last)
<ipython-input-1-dbf8530779e9> in <module>
16 ds.features
```
### Expected behavior
I was trying to upload an image dataset and expected it to be fully uploaded
### Environment info
- `datasets` version: 2.8.0
- Platform: Windows-10-10.0.19041-SP0
- Python version: 3.7.9
- PyArrow version: 10.0.1
- Pandas version: 1.3.5
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Unpin pydantic
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[] | 2022-12-30T10:37:31
| 2022-12-30T10:43:41
| 2022-12-30T10:43:41
|
MEMBER
| null | null | null | null |
Once `pydantic` fixes their issue in their 1.10.3 version, unpin it.
See issue:
- #5394
See temporary fix:
- #5395
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CI error: TypeError: dataclass_transform() got an unexpected keyword argument 'field_specifiers'
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[
"I still getting the same error :\r\n\r\n`python -m spacy download fr_core_news_lg\r\n`.\r\n`import spacy`",
"@MFatnassi, this issue and the corresponding fix only affect our Continuous Integration testing environment.\r\n\r\nNote that `datasets` does not depend on `spacy`."
] | 2022-12-29T18:58:44
| 2022-12-30T10:40:51
| 2022-12-29T21:00:27
|
MEMBER
| null | null | null | null |
### Describe the bug
While installing the dependencies, the CI raises a TypeError:
```
Traceback (most recent call last):
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 183, in _run_module_as_main
mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 142, in _get_module_details
return _get_module_details(pkg_main_name, error)
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/runpy.py", line 109, in _get_module_details
__import__(pkg_name)
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/__init__.py", line 6, in <module>
from .errors import setup_default_warnings
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/errors.py", line 2, in <module>
from .compat import Literal
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/spacy/compat.py", line 3, in <module>
from thinc.util import copy_array
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/thinc/__init__.py", line 5, in <module>
from .config import registry
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/thinc/config.py", line 2, in <module>
import confection
File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/confection/__init__.py", line 10, in <module>
from pydantic import BaseModel, create_model, ValidationError, Extra
File "pydantic/__init__.py", line 2, in init pydantic.__init__
File "pydantic/dataclasses.py", line 46, in init pydantic.dataclasses
# | None | Attribute is set to None. |
File "pydantic/main.py", line 121, in init pydantic.main
TypeError: dataclass_transform() got an unexpected keyword argument 'field_specifiers'
```
See: https://github.com/huggingface/datasets/actions/runs/3793736481/jobs/6466356565
### Steps to reproduce the bug
```shell
pip install .[tests,metrics-tests]
python -m spacy download en_core_web_sm
```
### Expected behavior
No error.
### Environment info
See: https://github.com/huggingface/datasets/actions/runs/3793736481/jobs/6466356565
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I_kwDODunzps5aBh5A
| 5,391
|
Whisper Event - RuntimeError: The size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1 100% 1000/1000 [2:52:21<00:00, 10.34s/it]
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[
"Hey @catswithbats! Super sorry for the late reply! This is happening because there is data with label length (504) that exceeds the model's max length (448). \r\n\r\nThere are two options here:\r\n1. Increase the model's `max_length` parameter: \r\n```python\r\nmodel.config.max_length = 512\r\n```\r\n2. Filter data with labels longer than max length: https://discuss.huggingface.co/t/open-to-the-community-whisper-fine-tuning-event/26681/21?u=sanchit-gandhi\r\n\r\nNote that the datasets repo is reserved for issues directly related to the HF datasets library. Issues related to custom fine-tuning implementations are more applicable to the HF Forum: https://discuss.huggingface.co. You're more likely to get a response by posting your issue in the most applicable place and boost the chance of someone sharing a working solution!",
"@sanchit-gandhi Thank you for all your work on this topic.\r\n\r\nI'm finding that changing the `max_length` value does not make this error go away."
] | 2022-12-25T15:17:14
| 2023-07-21T14:29:47
| 2023-07-21T14:29:47
|
NONE
| null | null | null | null |
Done in a VM with a GPU (Ubuntu) following the [Whisper Event - PYTHON](https://github.com/huggingface/community-events/tree/main/whisper-fine-tuning-event#python-script) instructions.
Attempted using [RuntimeError: he size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1 100% 1000/1000 - WEB](https://discuss.huggingface.co/t/trainer-runtimeerror-the-size-of-tensor-a-462-must-match-the-size-of-tensor-b-448-at-non-singleton-dimension-1/26010/10 ) - another person experiencing the same issue. But could not resolve the issue with the google/fleurs data. __Not clear what can be modified in the PY code to resolve the input data size mismatch, as the training data is already very small__.
Tried posting on Discord, @sanchit-gandhi and @vaibhavs10. Was hoping that the event is over and some input/help is now available. [Hugging Face - whisper-small-amet](https://huggingface.co/drmeeseeks/whisper-small-amet).
The paper [Robust Speech Recognition via Large-Scale Weak Supervision](https://arxiv.org/abs/2212.04356) am_et is a low resource language (Table E), with the WER results ranging from 120-229, based on model size. (Whisper small WER=120.2).
# ---> Initial Training Output
/usr/local/lib/python3.8/dist-packages/transformers/optimization.py:306: FutureWarning: This implementation of AdamW is deprecated and will be removed in a future version. Use the PyTorch implementation torch.optim.AdamW instead, or set `no_deprecation_warning=True` to disable this warning
warnings.warn(
[INFO|trainer.py:1641] 2022-12-18 05:23:28,799 >> ***** Running training *****
[INFO|trainer.py:1642] 2022-12-18 05:23:28,799 >> Num examples = 446
[INFO|trainer.py:1643] 2022-12-18 05:23:28,799 >> Num Epochs = 72
[INFO|trainer.py:1644] 2022-12-18 05:23:28,799 >> Instantaneous batch size per device = 16
[INFO|trainer.py:1645] 2022-12-18 05:23:28,799 >> Total train batch size (w. parallel, distributed & accumulation) = 32
[INFO|trainer.py:1646] 2022-12-18 05:23:28,799 >> Gradient Accumulation steps = 2
[INFO|trainer.py:1647] 2022-12-18 05:23:28,800 >> Total optimization steps = 1000
[INFO|trainer.py:1648] 2022-12-18 05:23:28,801 >> Number of trainable parameters = 241734912
# ---> Error
14% 9/65 [07:07<48:34, 52.04s/it][INFO|configuration_utils.py:523] 2022-12-18 05:03:07,941 >> Generate config GenerationConfig {
"begin_suppress_tokens": [
220,
50257
],
"bos_token_id": 50257,
"decoder_start_token_id": 50258,
"eos_token_id": 50257,
"max_length": 448,
"pad_token_id": 50257,
"transformers_version": "4.26.0.dev0",
"use_cache": false
}
Traceback (most recent call last):
File "run_speech_recognition_seq2seq_streaming.py", line 629, in <module>
main()
File "run_speech_recognition_seq2seq_streaming.py", line 578, in main
train_result = trainer.train(resume_from_checkpoint=checkpoint)
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 1534, in train
return inner_training_loop(
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 1859, in _inner_training_loop
self._maybe_log_save_evaluate(tr_loss, model, trial, epoch, ignore_keys_for_eval)
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 2122, in _maybe_log_save_evaluate
metrics = self.evaluate(ignore_keys=ignore_keys_for_eval)
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer_seq2seq.py", line 78, in evaluate
return super().evaluate(eval_dataset, ignore_keys=ignore_keys, metric_key_prefix=metric_key_prefix)
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 2818, in evaluate
output = eval_loop(
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer.py", line 3000, in evaluation_loop
loss, logits, labels = self.prediction_step(model, inputs, prediction_loss_only, ignore_keys=ignore_keys)
File "/usr/local/lib/python3.8/dist-packages/transformers/trainer_seq2seq.py", line 213, in prediction_step
outputs = model(**inputs)
File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl
return forward_call(*input, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 1197, in forward
outputs = self.model(
File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl
return forward_call(*input, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 1066, in forward
decoder_outputs = self.decoder(
File "/usr/local/lib/python3.8/dist-packages/torch/nn/modules/module.py", line 1190, in _call_impl
return forward_call(*input, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/transformers/models/whisper/modeling_whisper.py", line 873, in forward
hidden_states = inputs_embeds + positions
RuntimeError: The size of tensor a (504) must match the size of tensor b (448) at non-singleton dimension 1
100% 1000/1000 [2:52:21<00:00, 10.34s/it]
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I_kwDODunzps5Z9vfx
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|
Error when pushing to the CI hub
|
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[
"Hmmm, git bisect tells me that the behavior is the same since https://github.com/huggingface/datasets/commit/67e65c90e9490810b89ee140da11fdd13c356c9c (3 Oct), i.e. https://github.com/huggingface/datasets/pull/4926",
"Maybe related to the discussions in https://github.com/huggingface/datasets/pull/5196",
"Maybe the current version of moonlanding in Hub CI is the issue.\r\n\r\nI relaunched tests that were working two days ago: now they are failing. https://github.com/huggingface/datasets-server/commit/746414449cae4b311733f8a76e5b3b4ca73b38a9 for example\r\n\r\ncc @huggingface/moon-landing ",
"Hi! I don't think this has anything to do with `datasets`. Hub CI seems to be the culprit - the identical failure can be found in [this](https://github.com/huggingface/datasets/pull/5389) PR (with unrelated changes) opened today.",
"OK! Thanks for looking at it. Closing then."
] | 2022-12-23T13:36:37
| 2022-12-23T20:29:02
| 2022-12-23T20:29:02
|
COLLABORATOR
| null | null | null | null |
### Describe the bug
Note that it's a special case where the Hub URL is "https://hub-ci.huggingface.co", which does not appear if we do the same on the Hub (https://huggingface.co).
The call to `dataset.push_to_hub(` fails:
```
Pushing dataset shards to the dataset hub: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:01<00:00, 1.93s/it]
Traceback (most recent call last):
File "reproduce_hubci.py", line 16, in <module>
dataset.push_to_hub(repo_id=repo_id, private=False, token=USER_TOKEN, embed_external_files=True)
File "/home/slesage/hf/datasets/src/datasets/arrow_dataset.py", line 5025, in push_to_hub
HfApi(endpoint=config.HF_ENDPOINT).upload_file(
File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/huggingface_hub/hf_api.py", line 1346, in upload_file
raise err
File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/huggingface_hub/hf_api.py", line 1337, in upload_file
r.raise_for_status()
File "/home/slesage/.pyenv/versions/datasets/lib/python3.8/site-packages/requests/models.py", line 953, in raise_for_status
raise HTTPError(http_error_msg, response=self)
requests.exceptions.HTTPError: 400 Client Error: Bad Request for url: https://hub-ci.huggingface.co/api/datasets/__DUMMY_DATASETS_SERVER_USER__/bug-16718047265472/upload/main/README.md
```
### Steps to reproduce the bug
```python
# reproduce.py
from datasets import Dataset
import time
USER = "__DUMMY_DATASETS_SERVER_USER__"
USER_TOKEN = "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"
dataset = Dataset.from_dict({"a": [1, 2, 3]})
repo_id = f"{USER}/bug-{int(time.time() * 10e3)}"
dataset.push_to_hub(repo_id=repo_id, private=False, token=USER_TOKEN, embed_external_files=True)
```
```bash
$ HF_ENDPOINT="https://hub-ci.huggingface.co" python reproduce.py
```
### Expected behavior
No error and the dataset should be uploaded to the Hub with the README file (which generates the error).
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.15.0-1026-aws-x86_64-with-glibc2.35
- Python version: 3.9.15
- PyArrow version: 7.0.0
- Pandas version: 1.5.2
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Getting Value Error while loading a dataset..
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[
"Hi! I can't reproduce this error locally (Mac) or in Colab. What version of `datasets` are you using?",
"Hi [mariosasko](https://github.com/mariosasko), the datasets version is '2.8.0'.",
"@valmetisrinivas you get that error because you imported `datasets` (and thus `fsspec`) before installing `zstandard`.\r\n\r\nPlease, restart your Colab runtime and execute the install commands before importing `datasets`:\r\n```python\r\n!pip install datasets\r\n!pip install zstandard\r\n\r\nfrom datasets import load_dataset\r\n\r\nds = load_dataset(\r\n \"json\",\r\n data_files=\"https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst\",\r\n split=\"train\",\r\n streaming=True,\r\n)\r\nnext(iter(ds))\r\n```",
"> @valmetisrinivas you get that error because you imported `datasets` (and thus `fsspec`) before installing `zstandard`.\r\n> \r\n> Please, restart your Colab runtime and execute the install commands before importing `datasets`:\r\n> \r\n> ```python\r\n> !pip install datasets\r\n> !pip install zstandard\r\n> \r\n> from datasets import load_dataset\r\n> \r\n> ds = load_dataset(\r\n> \"json\",\r\n> data_files=\"https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst\",\r\n> split=\"train\",\r\n> streaming=True,\r\n> )\r\n> next(iter(ds))\r\n> ```\r\n\r\nI guess that was the problem, importing datasets before the installation of zstandard. Thank you for the feedback. "
] | 2022-12-23T08:16:43
| 2022-12-29T08:36:33
| 2022-12-27T17:59:09
|
NONE
| null | null | null | null |
### Describe the bug
I am trying to load a dataset using Hugging Face Datasets load_dataset method. I am getting the value error as show below. Can someone help with this? I am using Windows laptop and Google Colab notebook.
```
WARNING:datasets.builder:Using custom data configuration default-a1d9e8eaedd958cd
---------------------------------------------------------------------------
ValueError Traceback (most recent call last)
[<ipython-input-12-5b4fdcb8e6d5>](https://localhost:8080/#) in <module>
6 )
7
----> 8 next(iter(law_dataset_streamed))
17 frames
[/usr/local/lib/python3.8/dist-packages/fsspec/core.py](https://localhost:8080/#) in get_compression(urlpath, compression)
485 compression = infer_compression(urlpath)
486 if compression is not None and compression not in compr:
--> 487 raise ValueError("Compression type %s not supported" % compression)
488 return compression
489
ValueError: Compression type zstd not supported
```
### Steps to reproduce the bug
```
!pip install zstandard
from datasets import load_dataset
lds = load_dataset(
"json",
data_files="https://the-eye.eu/public/AI/pile_preliminary_components/FreeLaw_Opinions.jsonl.zst",
split="train",
streaming=True,
)
```
### Expected behavior
I expect an iterable object as the output 'lds' to be created.
### Environment info
Windows laptop with Google Colab notebook
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I_kwDODunzps5Z7YxR
| 5,387
|
Missing documentation page : improve-performance
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[
"Hi! Our documentation builder does not support links to sections, hence the bug. This is the link it should point to https://huggingface.co/docs/datasets/v2.8.0/en/cache#improve-performance."
] | 2022-12-23T01:12:57
| 2023-01-24T16:33:40
| 2023-01-24T16:33:40
|
NONE
| null | null | null | null |
### Describe the bug
Trying to access https://huggingface.co/docs/datasets/v2.8.0/en/package_reference/cache#improve-performance, the page is missing.
The link is in here : https://huggingface.co/docs/datasets/v2.8.0/en/package_reference/loading_methods#datasets.load_dataset.keep_in_memory
### Steps to reproduce the bug
Access the page and see it's missing.
### Expected behavior
Not missing page
### Environment info
Doesn't matter
|
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I_kwDODunzps5Z600W
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|
`max_shard_size` in `datasets.push_to_hub()` breaks with large files
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[
"Hi! \r\n\r\nThis behavior stems from the fact that we don't always embed image bytes in the underlying arrow table, which can lead to bad size estimation (we use the first 1000 table rows to [estimate](https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/arrow_dataset.py#L4627) the external file size). We plan to address this in the next major release by always embedding external bytes. In the meantime, you can either shuffle the dataset with `.shuffle().flatten_indices()` to make the estimation more precise or embed the bytes in the table like so:\r\n```python\r\nfrom datasets.table import embed_table_storage\r\nformat = ds.format\r\nds = ds.with_format(\"arrow\")\r\nds = ds.map(embed_table_storage, batched=True)\r\nds = ds.with_format(**format)\r\n...\r\nds.push_to_hub(...)\r\n```",
"Embedding the bytes worked like charm. Thanks @mariosasko!"
] | 2022-12-22T21:50:58
| 2022-12-26T23:45:51
| 2022-12-26T23:45:51
|
NONE
| null | null | null | null |
### Describe the bug
`max_shard_size` parameter for `datasets.push_to_hub()` works unreliably with large files, generating shard files that are way past the specified limit.
In my private dataset, which contains unprocessed images of all sizes (up to `~100MB` per file), I've encountered cases where `max_shard_size='100MB'` results in shard files that are `>2GB` in size. Setting `max_shard_size` to another value, such as `1GB` or `500MB` does not fix this problem.
**The real problem is this:** When the shard file size grows too big, the entire dataset breaks because of #4721 and ultimately https://issues.apache.org/jira/browse/ARROW-5030. Since `max_shard_size` does not let one accurately control the size of the shard files, it becomes very easy to build a large dataset without any warnings that it will be broken -- even when you think you are mitigating this problem by setting `max_shard_size`.
```
File " /path/to/sd-test-suite-v1/venv/lib/site-packages/datasets/builder.py", line 1763, in _prepare_split_single
for _, table in generator:
File " /path/to/sd-test-suite-v1/venv/lib/site-packages/datasets/packaged_modules/parquet/parquet.py", line 69, in _generate_tables
for batch_idx, record_batch in enumerate(
File "pyarrow/_parquet.pyx", line 1323, in iter_batches
File "pyarrow/error.pxi", line 121, in pyarrow.lib.check_status
pyarrow.lib.ArrowNotImplementedError: Nested data conversions not implemented for chunked array outputs
```
### Steps to reproduce the bug
1. Clone [example repo](https://github.com/salieri/hf-dataset-shard-size-bug)
2. Follow steps in [README.md](https://github.com/salieri/hf-dataset-shard-size-bug/blob/main/README.md)
3. After uploading the dataset, you will see that the shard file size varies between `30MB` and `200MB` -- way beyond the `max_shard_size='75MB'` limit (example: `train-00003-of-00131...` is `155MB` in [here](https://huggingface.co/datasets/slri/shard-size-test/tree/main/data))
(Note that this example repo does not generate shard files that are so large that they would trigger #4721)
### Expected behavior
The shard file size should remain below or equal to `max_shard_size`.
### Environment info
- `datasets` version: 2.8.0
- Platform: Linux-5.10.157-139.675.amzn2.aarch64-aarch64-with-glibc2.17
- Python version: 3.7.15
- PyArrow version: 10.0.1
- Pandas version: 1.3.5
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|
Is `fs=` deprecated in `load_from_disk()` as well?
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[
"Hi! Yes, we should deprecate the `fs` param here. Would you be interested in submitting a PR? ",
"> Hi! Yes, we should deprecate the `fs` param here. Would you be interested in submitting a PR?\r\n\r\nYeah I can do that sometime next week. Should the storage_options be a new arg here? I’ll look around for anywhere else where fs is an arg.",
"Closed by #5393."
] | 2022-12-22T21:00:45
| 2023-01-23T10:50:05
| 2023-01-23T10:50:04
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
The `fs=` argument was deprecated from `Dataset.save_to_disk` and `Dataset.load_from_disk` in favor of automagically figuring it out via fsspec:
https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/arrow_dataset.py#L1339-L1340
Is there a reason the same thing shouldn't also apply to `datasets.load.load_from_disk()` as well ?
https://github.com/huggingface/datasets/blob/9a7272cd4222383a5b932b0083a4cc173fda44e8/src/datasets/load.py#L1779
### Steps to reproduce the bug
n/a
### Expected behavior
n/a
### Environment info
n/a
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IterableDataset missing column_names, differs from Dataset interface
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"Another example is that `IterableDataset.map` does not have `fn_kwargs`, among other arguments. It makes it harder to convert code from Dataset to IterableDataset.",
"Hi! `fn_kwargs` was added to `IterableDataset.map` in `datasets 2.5.0`, so please update your installation (`pip install -U datasets`) to use it.\r\n\r\nRegarding `column_names`, I agree we should add this property to `IterableDataset`. In the meantime, you can use `list(dataset.features.keys())` instead.",
"Thanks! That's great news.\n\nOn Thu, Dec 22, 2022, 07:48 Mario Šaško ***@***.***> wrote:\n\n> Hi! fn_kwargs was added to IterableDataset.map in datasets 2.5.0, so\n> please update your installation (pip install -U datasets) to use it.\n>\n> Regarding column_names, I agree we should add this property to\n> IterableDataset. In the meantime, you can use\n> list(dataset.features.keys()) instead.\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5383#issuecomment-1362993633>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/AAHD6N2EQUFEOUFDW3VHSILWORZ45ANCNFSM6AAAAAATGKWVGM>\n> .\n> You are receiving this because you authored the thread.Message ID:\n> ***@***.***>\n>\n",
"I'm marking this issue as a \"good first issue\", as it makes sense to have `IterableDataset.column_names` in the API. Besides the case when `features` are `None` (e.g., `features` are `None` after `map`), in which we can also return `column_names` as `None`, adding this property should be straightforward,",
"Hi @mariosasko, I can work on this if that's ok?",
"Yes! I've assigned you the issue."
] | 2022-12-22T05:27:02
| 2023-03-13T19:03:33
| 2023-03-13T19:03:33
|
NONE
| null | null | null | null |
### Describe the bug
The documentation on [Stream](https://huggingface.co/docs/datasets/v1.18.2/stream.html) seems to imply that IterableDataset behaves just like a Dataset. However, examples like
```
dataset.map(augment_data, batched=True, remove_columns=dataset.column_names, ...)
```
will not work because `.column_names` does not exist on IterableDataset. I cannot find any clear explanation on why this is not available, is it an oversight? We do have `iterable_ds.features` available.
### Steps to reproduce the bug
See above
### Expected behavior
Dataset and IterableDataset would be expected to have the same interface, with any differences noted in the documentation.
### Environment info
n/a
|
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I_kwDODunzps5ZrNLT
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|
Wrong URL for the_pile dataset
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[
"Hi! This error can happen if there is a local file/folder with the same name as the requested dataset. And to avoid it, rename the local file/folder.\r\n\r\nSoon, it will be possible to explicitly request a Hub dataset as follows:https://github.com/huggingface/datasets/issues/5228#issuecomment-1313494020"
] | 2022-12-20T12:40:14
| 2023-02-15T16:24:57
| 2023-02-15T16:24:57
|
NONE
| null | null | null | null |
### Describe the bug
When trying to load `the_pile` dataset from the library, I get a `FileNotFound` error.
### Steps to reproduce the bug
Steps to reproduce:
Run:
```
from datasets import load_dataset
dataset = load_dataset("the_pile")
```
I get the output:
"name": "FileNotFoundError",
"message": "Unable to resolve any data file that matches '['**']' at /storage/store/work/lgrinszt/memorization/the_pile with any supported extension ['csv', 'tsv', 'json', 'jsonl', 'parquet', 'txt', 'blp', 'bmp', 'dib', 'bufr', 'cur', 'pcx', 'dcx', 'dds', 'ps', 'eps', 'fit', 'fits', 'fli', 'flc', 'ftc', 'ftu', 'gbr', 'gif', 'grib', 'h5', 'hdf', 'png', 'apng', 'jp2', 'j2k', 'jpc', 'jpf', 'jpx', 'j2c', 'icns', 'ico', 'im', 'iim', 'tif', 'tiff', 'jfif', 'jpe', 'jpg', 'jpeg', 'mpg', 'mpeg', 'msp', 'pcd', 'pxr', 'pbm', 'pgm', 'ppm', 'pnm', 'psd', 'bw', 'rgb', 'rgba', 'sgi', 'ras', 'tga', 'icb', 'vda', 'vst', 'webp', 'wmf', 'emf', 'xbm', 'xpm', 'BLP', 'BMP', 'DIB', 'BUFR', 'CUR', 'PCX', 'DCX', 'DDS', 'PS', 'EPS', 'FIT', 'FITS', 'FLI', 'FLC', 'FTC', 'FTU', 'GBR', 'GIF', 'GRIB', 'H5', 'HDF', 'PNG', 'APNG', 'JP2', 'J2K', 'JPC', 'JPF', 'JPX', 'J2C', 'ICNS', 'ICO', 'IM', 'IIM', 'TIF', 'TIFF', 'JFIF', 'JPE', 'JPG', 'JPEG', 'MPG', 'MPEG', 'MSP', 'PCD', 'PXR', 'PBM', 'PGM', 'PPM', 'PNM', 'PSD', 'BW', 'RGB', 'RGBA', 'SGI', 'RAS', 'TGA', 'ICB', 'VDA', 'VST', 'WEBP', 'WMF', 'EMF', 'XBM', 'XPM', 'aiff', 'au', 'avr', 'caf', 'flac', 'htk', 'svx', 'mat4', 'mat5', 'mpc2k', 'ogg', 'paf', 'pvf', 'raw', 'rf64', 'sd2', 'sds', 'ircam', 'voc', 'w64', 'wav', 'nist', 'wavex', 'wve', 'xi', 'mp3', 'opus', 'AIFF', 'AU', 'AVR', 'CAF', 'FLAC', 'HTK', 'SVX', 'MAT4', 'MAT5', 'MPC2K', 'OGG', 'PAF', 'PVF', 'RAW', 'RF64', 'SD2', 'SDS', 'IRCAM', 'VOC', 'W64', 'WAV', 'NIST', 'WAVEX', 'WVE', 'XI', 'MP3', 'OPUS', 'zip']"
### Expected behavior
`the_pile` dataset should be dowloaded.
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-4.15.0-112-generic-x86_64-with-glibc2.27
- Python version: 3.10.8
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
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I_kwDODunzps5Zq2JL
| 5,380
|
Improve dataset `.skip()` speed in streaming mode
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[
"Hi! I agree `skip` can be inefficient to use in the current state.\r\n\r\nTo make it fast, we could use \"statistics\" stored in Parquet metadata and read only the chunks needed to form a dataset. \r\n\r\nAnd thanks to the \"datasets-server\" project, which aims to store the Parquet versions of the Hub datasets (only the smaller datasets are covered currently), this solution can also be applied to datasets stored in formats other than Parquet. (cc @severo)",
"@mariosasko do the current parquet files created by the datasets-server already have the required \"statistics\"? If not, please open an issue on https://github.com/huggingface/datasets-server with some details to make sure we implement it.",
"Yes, nothing has to be changed on the datasets-server side. What I mean by \"statistics\" is that we can use the \"row_group\" metadata embedded in a Parquet file (by default) to fetch the requested rows more efficiently.",
"Glad to see the feature could be of interest. \r\n\r\nI'm sure there are many possible ways to implement this feature. I don't know enough about the datasets-server, but I guess that it is not instantaneous, in the sense that user-owned private datasets might need hours or days until they are ported to the datasets-server (if at all), which could be cumbersome. Having optionally that information in the `dataset_infos.json` file would make it easier for users to control the skip process a bit.",
"re: statistics:\r\n\r\n- https://arrow.apache.org/docs/python/generated/pyarrow.parquet.FileMetaData.html\r\n- https://arrow.apache.org/docs/python/generated/pyarrow.parquet.RowGroupMetaData.html\r\n\r\n```python\r\n>>> import pyarrow.parquet as pq\r\n>>> import hffs\r\n>>> fs = hffs.HfFileSystem(\"glue\", repo_type=\"dataset\", revision=\"refs/convert/parquet\")\r\n>>> metadata = pq.read_metadata(\"ax/glue-test.parquet\", filesystem=fs)\r\n>>> metadata\r\n<pyarrow._parquet.FileMetaData object at 0x7f4537cec400>\r\n created_by: parquet-cpp-arrow version 7.0.0\r\n num_columns: 4\r\n num_rows: 1104\r\n num_row_groups: 2\r\n format_version: 1.0\r\n serialized_size: 2902\r\n>>> metadata.row_group(0)\r\n<pyarrow._parquet.RowGroupMetaData object at 0x7f45564bcbd0>\r\n num_columns: 4\r\n num_rows: 1000\r\n total_byte_size: 164474\r\n>>> metadata.row_group(1)\r\n<pyarrow._parquet.RowGroupMetaData object at 0x7f455005c400>\r\n num_columns: 4\r\n num_rows: 104\r\n total_byte_size: 13064\r\n```",
"> user-owned private datasets might need hours or days until they are ported to the datasets-server (if at all)\r\n\r\nprivate datasets are not supported yet (https://github.com/huggingface/datasets-server/issues/39)",
"@versae `Dataset.push_to_hub` writes shards in Parquet, so this solution would also work for such datasets (immediately after the push). ",
"@mariosasko that is right. However, there are still a good amount of datasets for which the shards are created manually. In our very specific case, we create medium-sized datasets (rarely over 100-200GB) of both text and audio, we prepare the shards by hand and then upload then. It would be great to have immediate access to this download skipping feature for them too.",
"From looking at Arrow's source, it seems Parquet stores metadata at the end, which means one needs to iterate over a Parquet file's data before accessing its metadata. We could mimic Dask to address this \"limitation\" and write metadata in a `_metadata`/`_common_metadata` file in `to_parquet`/`push_to_hub`, which we could then use to optimize reads (if present). Plus, it's handy that PyArrow can also parse these metadata files.",
"So if Parquet metadata needs to be in its own file anyway, why not implement this skipping feature by storing the example counts per shard in `dataset_infos.json`? That would allow:\r\n- Support both private and public datasets\r\n- Immediate access to the feature upon uploading of shards\r\n- Use any dataset, not only those uploaded using `.push_to_hub()`\r\n\r\nA proper Parquet metadata file could still be created and \"overwrite\" the `dataset_infos.json` info in the datasets-server.",
"Any updates on this?"
] | 2022-12-20T11:25:23
| 2025-11-10T20:05:37
| null |
CONTRIBUTOR
| null | null | null | null |
### Feature request
Add extra information to the `dataset_infos.json` file to include the number of samples/examples in each shard, for example in a new field `num_examples` alongside `num_bytes`. The `.skip()` function could use this information to ignore the download of a shard when in streaming mode, which AFAICT it should speed up the skipping process.
### Motivation
When resuming from a checkpoint after a crashed run, using `dataset.skip()` is very convenient to recover the exact state of the data and to not train again over the same examples (assuming same seed, no shuffling). However, I have noticed that for audio datasets in streaming mode this is very costly in terms of time, as shards need to be downloaded every time before skipping the right number of examples.
### Your contribution
I took a look already at the code, but it seems a change like this is way deeper than I am able to manage, as it touches the library in several parts. I could give it a try but might need some guidance on the internals.
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The dataset "the_pile", subset "enron_emails" , load_dataset() failure
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"Thanks for reporting @shaoyuta. We are investigating it.\r\n\r\nWe are transferring the issue to \"the_pile\" Community tab on the Hub: https://huggingface.co/datasets/the_pile/discussions/4"
] | 2022-12-20T02:19:13
| 2022-12-20T07:52:54
| 2022-12-20T07:52:54
|
NONE
| null | null | null | null |
### Describe the bug
When run
"datasets.load_dataset("the_pile","enron_emails")" failure
### Steps to reproduce the bug
Run below code in python cli:
>>> import datasets
>>> datasets.load_dataset("the_pile","enron_emails")
### Expected behavior
Load dataset "the_pile", "enron_emails" successfully.
### Environment info
Copy-and-paste the text below in your GitHub issue.
- `datasets` version: 2.7.1
- Platform: Linux-5.15.0-53-generic-x86_64-with-glibc2.35
- Python version: 3.10.6
- PyArrow version: 10.0.0
- Pandas version: 1.4.3
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Using too many threads results in: Got disconnected from remote data host. Retrying in 5sec
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[
"The data files are hosted on HF at https://huggingface.co/datasets/allenai/c4/tree/main\r\n\r\nYou have 200 runs streaming the same files in parallel. So this is probably a Hub limitation. Maybe rate limiting ? cc @julien-c \r\n\r\nMaybe you can also try to reduce the number of HTTP requests by increasing the block size of each request. This can be done by increasing `DEFAULT_BLOCK_SIZE` in `fsspec.implementations.http`. Default is `5 * 2**20` (5MiB)\r\n\r\nAnyway maybe it's just better to save the dataset locally in that case ?",
"you don't get an HTTP error code or something in your stack trace? Kinda hard to debug with this info",
"You could try to re-run using this `datasets` branch: [raise-err-when-disconnect](https://github.com/huggingface/datasets/compare/raise-err-when-disconnect?expand=1)\r\nIt should raise the fsspec error",
"The weird thing is that I already have it saved locally & it seems to indeed be using the cached one 🧐 ; I'm also using offline mode, so I don't think it has something to do with the Hub.\r\n```\r\nWARNING:datasets.load:Using the latest cached version of the module from /users/muennighoff/.cache/huggingface/modules/datasets_modules/datasets/c4/df532b158939272d032cc63ef19cd5b83e9b4d00c922b833e4cb18b2e9869b01 (last modified on Mon Dec 12 10:45:02 2022) since it couldn't be found locally at c4.\r\n```\r\n\r\n",
"No, you passed `streaming=True` so it streams the data from the Hub.\r\nThis message just shows that you use the cached version of the `c4` **module**, aka the python script that is run to generate the examples from the raw data files.\r\n\r\nMaybe the offline mode should also disable `fsspec`/`aiohttp` HTTP calls in `datasets` and not just the `requests` ones.",
"> This message just shows that you use the cached version of the c4 module\r\n\r\nAh my bad you're right about the module, but it's also using the downloaded & cached c4 dataset. There's no internet during the runs so it wouldn't work otherwise",
"You don't have internet, therefore you get an error while trying to stream ;)"
] | 2022-12-18T11:38:58
| 2023-07-24T15:23:07
| 2023-07-24T15:23:07
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
`streaming_download_manager` seems to disconnect if too many runs access the same underlying dataset 🧐
The code works fine for me if I have ~100 runs in parallel, but disconnects once scaling to 200.
Possibly related:
- https://github.com/huggingface/datasets/pull/3100
- https://github.com/huggingface/datasets/pull/3050
### Steps to reproduce the bug
Running
```python
c4 = datasets.load_dataset("c4", "en", split="train", streaming=True).skip(args.start).take(args.end-args.start)
df = pd.DataFrame(c4, index=None)
```
with different start & end arguments on 200 CPUs in parallel yields:
```
WARNING:datasets.load:Using the latest cached version of the module from /users/muennighoff/.cache/huggingface/modules/datasets_modules/datasets/c4/df532b158939272d032cc63ef19cd5b83e9b4d00c922b833e4cb18b2e9869b01 (last modified on Mon Dec 12 10:45:02 2022) since it couldn't be found locally at c4.
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [1/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [2/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [3/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [4/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [5/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [6/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [7/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [8/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [9/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [10/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [11/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [12/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [13/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [14/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [15/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [16/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [17/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [18/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [19/20]
WARNING:datasets.download.streaming_download_manager:Got disconnected from remote data host. Retrying in 5sec [20/20]
╭───────────────────── Traceback (most recent call last) ──────────────────────╮
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/dec-2022-tasky/inference │
│ _c4.py:68 in <module> │
│ │
│ 65 │ model.eval() │
│ 66 │ │
│ 67 │ c4 = datasets.load_dataset("c4", "en", split="train", streaming=Tru │
│ ❱ 68 │ df = pd.DataFrame(c4, index=None) │
│ 69 │ texts = df["text"].to_list() │
│ 70 │ preds = batch_inference(texts, batch_size=args.batch_size) │
│ 71 │
│ │
│ /opt/cray/pe/python/3.9.12.1/lib/python3.9/site-packages/pandas/core/frame.p │
│ y:684 in __init__ │
│ │
│ 681 │ │ # For data is list-like, or Iterable (will consume into list │
│ 682 │ │ elif is_list_like(data): │
│ 683 │ │ │ if not isinstance(data, (abc.Sequence, ExtensionArray)): │
│ ❱ 684 │ │ │ │ data = list(data) │
│ 685 │ │ │ if len(data) > 0: │
│ 686 │ │ │ │ if is_dataclass(data[0]): │
│ 687 │ │ │ │ │ data = dataclasses_to_dicts(data) │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/iterable_dataset.py:751 in __iter__ │
│ │
│ 748 │ │ yield from ex_iterable.shard_data_sources(shard_idx) │
│ 749 │ │
│ 750 │ def __iter__(self): │
│ ❱ 751 │ │ for key, example in self._iter(): │
│ 752 │ │ │ if self.features: │
│ 753 │ │ │ │ # `IterableDataset` automatically fills missing colum │
│ 754 │ │ │ │ # This is done with `_apply_feature_types`. │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/iterable_dataset.py:741 in _iter │
│ │
│ 738 │ │ │ ex_iterable = self._ex_iterable.shuffle_data_sources(self │
│ 739 │ │ else: │
│ 740 │ │ │ ex_iterable = self._ex_iterable │
│ ❱ 741 │ │ yield from ex_iterable │
│ 742 │ │
│ 743 │ def _iter_shard(self, shard_idx: int): │
│ 744 │ │ if self._shuffling: │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/iterable_dataset.py:617 in __iter__ │
│ │
│ 614 │ │ self.n = n │
│ 615 │ │
│ 616 │ def __iter__(self): │
│ ❱ 617 │ │ yield from islice(self.ex_iterable, self.n) │
│ 618 │ │
│ 619 │ def shuffle_data_sources(self, generator: np.random.Generator) -> │
│ 620 │ │ """Doesn't shuffle the wrapped examples iterable since it wou │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/iterable_dataset.py:594 in __iter__ │
│ │
│ 591 │ │
│ 592 │ def __iter__(self): │
│ 593 │ │ #ex_iterator = iter(self.ex_iterable) │
│ ❱ 594 │ │ yield from islice(self.ex_iterable, self.n, None) │
│ 595 │ │ #for _ in range(self.n): │
│ 596 │ │ # next(ex_iterator) │
│ 597 │ │ #yield from islice(ex_iterator, self.n, None) │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/iterable_dataset.py:106 in __iter__ │
│ │
│ 103 │ │ self.kwargs = kwargs │
│ 104 │ │
│ 105 │ def __iter__(self): │
│ ❱ 106 │ │ yield from self.generate_examples_fn(**self.kwargs) │
│ 107 │ │
│ 108 │ def shuffle_data_sources(self, generator: np.random.Generator) -> │
│ 109 │ │ return ShardShuffledExamplesIterable(self.generate_examples_f │
│ │
│ /users/muennighoff/.cache/huggingface/modules/datasets_modules/datasets/c4/d │
│ f532b158939272d032cc63ef19cd5b83e9b4d00c922b833e4cb18b2e9869b01/c4.py:89 in │
│ _generate_examples │
│ │
│ 86 │ │ for filepath in filepaths: │
│ 87 │ │ │ logger.info("generating examples from = %s", filepath) │
│ 88 │ │ │ with gzip.open(open(filepath, "rb"), "rt", encoding="utf-8" │
│ ❱ 89 │ │ │ │ for line in f: │
│ 90 │ │ │ │ │ if line: │
│ 91 │ │ │ │ │ │ example = json.loads(line) │
│ 92 │ │ │ │ │ │ yield id_, example │
│ │
│ /opt/cray/pe/python/3.9.12.1/lib/python3.9/gzip.py:313 in read1 │
│ │
│ 310 │ │ │
│ 311 │ │ if size < 0: │
│ 312 │ │ │ size = io.DEFAULT_BUFFER_SIZE │
│ ❱ 313 │ │ return self._buffer.read1(size) │
│ 314 │ │
│ 315 │ def peek(self, n): │
│ 316 │ │ self._check_not_closed() │
│ │
│ /opt/cray/pe/python/3.9.12.1/lib/python3.9/_compression.py:68 in readinto │
│ │
│ 65 │ │
│ 66 │ def readinto(self, b): │
│ 67 │ │ with memoryview(b) as view, view.cast("B") as byte_view: │
│ ❱ 68 │ │ │ data = self.read(len(byte_view)) │
│ 69 │ │ │ byte_view[:len(data)] = data │
│ 70 │ │ return len(data) │
│ 71 │
│ │
│ /opt/cray/pe/python/3.9.12.1/lib/python3.9/gzip.py:493 in read │
│ │
│ 490 │ │ │ │ self._new_member = False │
│ 491 │ │ │ │
│ 492 │ │ │ # Read a chunk of data from the file │
│ ❱ 493 │ │ │ buf = self._fp.read(io.DEFAULT_BUFFER_SIZE) │
│ 494 │ │ │ │
│ 495 │ │ │ uncompress = self._decompressor.decompress(buf, size) │
│ 496 │ │ │ if self._decompressor.unconsumed_tail != b"": │
│ │
│ /opt/cray/pe/python/3.9.12.1/lib/python3.9/gzip.py:96 in read │
│ │
│ 93 │ │ │ read = self._read │
│ 94 │ │ │ self._read = None │
│ 95 │ │ │ return self._buffer[read:] + \ │
│ ❱ 96 │ │ │ │ self.file.read(size-self._length+read) │
│ 97 │ │
│ 98 │ def prepend(self, prepend=b''): │
│ 99 │ │ if self._read is None: │
│ │
│ /pfs/lustrep4/scratch/project_462000119/muennighoff/nov-2022-bettercom/venv/ │
│ lib/python3.9/site-packages/datasets/download/streaming_download_manager.py: │
│ 365 in read_with_retries │
│ │
│ 362 │ │ │ │ ) │
│ 363 │ │ │ │ time.sleep(config.STREAMING_READ_RETRY_INTERVAL) │
│ 364 │ │ else: │
│ ❱ 365 │ │ │ raise ConnectionError("Server Disconnected") │
│ 366 │ │ return out │
│ 367 │ │
│ 368 │ file_obj.read = read_with_retries │
╰──────────────────────────────────────────────────────────────────────────────╯
ConnectionError: Server Disconnected
```
### Expected behavior
There should be no disconnect I think.
### Environment info
```
datasets=2.7.0
Python 3.9.12
```
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Add a robustness benchmark dataset for vision
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[
"Ccing @nazneenrajani @lvwerra @osanseviero "
] | 2022-12-17T12:35:13
| 2022-12-20T06:21:41
| null |
MEMBER
| null | null | null | null |
### Name
ImageNet-C
### Paper
Benchmarking Neural Network Robustness to Common Corruptions and Perturbations
### Data
https://github.com/hendrycks/robustness
### Motivation
It's a known fact that vision models are brittle when they meet with slightly corrupted and perturbed data. This is also correlated to the robustness aspects of vision models.
Researchers use different benchmark datasets to evaluate the robustness aspects of vision models. ImageNet-C is one of them.
Having this dataset in 🤗 Datasets would allow researchers to evaluate and study the robustness aspects of vision models. Since the metric associated with these evaluations is top-1 accuracy, researchers should be able to easily take advantage of the evaluation benchmarks on the Hub and perform comprehensive reporting.
ImageNet-C is a large dataset. Once it's in, it can act as a reference and we can also reach out to the authors of the other robustness benchmark datasets in vision, such as ObjectNet, WILDS, Metashift, etc. These datasets cater to different aspects. For example, ObjectNet is related to assessing how well a model performs under sub-population shifts.
Related thread: https://huggingface.slack.com/archives/C036H4A5U8Z/p1669994598060499
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I_kwDODunzps5ZTEe1
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Dataset.from_generator() crashes on simple example
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Run 'GPT-J' failure due to download dataset fail (' ConnectionError: Couldn't reach http://eaidata.bmk.sh/data/enron_emails.jsonl.zst ' )
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[
"Thanks for reporting, @shaoyuta.\r\n\r\nWe have checked and yes, apparently there is an issue with the server hosting the data of the \"enron_emails\" subset of \"the_pile\" dataset: http://eaidata.bmk.sh/data/enron_emails.jsonl.zst\r\nIt seems to be down: The connection has timed out.\r\n\r\nPlease note that at the Hugging Face Hub, we are not hosting their data for this dataset, but only a script that downloads the data from their servers. We are updating the data URL to one in another server.\r\n\r\nIn the meantime, please note that you can train your model in the entire \"the_pile\" dataset, by passing the \"all\" config (instead of the \"enron_emails\" one).",
"We have transferred this issue to the corresponding dataset Community tab: https://huggingface.co/datasets/the_pile/discussions/2\r\n\r\nPlease, follow the updates there."
] | 2022-12-15T01:23:03
| 2022-12-15T07:45:54
| 2022-12-15T07:45:53
|
NONE
| null | null | null | null |
### Describe the bug
Run model "GPT-J" with dataset "the_pile" fail.
The fail out is as below:
Looks like which is due to "http://eaidata.bmk.sh/data/enron_emails.jsonl.zst" unreachable .
### Steps to reproduce the bug
Steps to reproduce this issue:
git clone https://github.com/huggingface/transformers
cd transformers
python examples/pytorch/language-modeling/run_clm.py --model_name_or_path EleutherAI/gpt-j-6B --dataset_name the_pile --dataset_config_name enron_emails --do_eval --output_dir /tmp/output --overwrite_output_dir
### Expected behavior
This issue looks like due to "http://eaidata.bmk.sh/data/enron_emails.jsonl.zst " couldn't be reached.
Is there another way to download the dataset "the_pile" ?
Is there another way to cache the dataset "the_pile" but not let the hg to download it when runtime ?
### Environment info
huggingface_hub version: 0.11.1
Platform: Linux-5.15.0-52-generic-x86_64-with-glibc2.35
Python version: 3.9.12
Running in iPython ?: No
Running in notebook ?: No
Running in Google Colab ?: No
Token path ?: /home/taosy/.huggingface/token
Has saved token ?: False
Configured git credential helpers:
FastAI: N/A
Tensorflow: N/A
Torch: N/A
Jinja2: N/A
Graphviz: N/A
Pydot: N/A
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How concatenate `Audio` elements using batch mapping
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[
"You can try something like this ?\r\n```python\r\ndef mapper_function(batch):\r\n return {\"concatenated_audio\": [np.concatenate([audio[\"array\"] for audio in batch[\"audio\"]])]}\r\n\r\ndataset = dataset.map(\r\n mapper_function,\r\n batched=True,\r\n batch_size=3,\r\n remove_columns=list(dataset.features),\r\n)\r\n```",
"Thanks for the snippet!\r\n\r\nOne more question. I wonder why those two mappers are working so different that one taking 4 sec while other taking over 1 min :\r\n\r\n```python\r\n%%time\r\ndef mapper_function1(batch):\r\n # list_audio\r\n return {\r\n \"audio\": [\r\n {\r\n \"array\": np.concatenate([audio[\"array\"] for audio in batch[\"audio\"]]),\r\n \"sampling_rate\": 16_000,\r\n }\r\n ]\r\n }\r\n\r\ndataset.map(\r\n mapper_function1,\r\n batched=True,\r\n batch_size=3,\r\n remove_columns=list(dataset.features),\r\n)\r\n\r\n# 100%\r\n# 135/135 [01:13<00:00, 1.93ba/s]\r\n# CPU times: user 1min 10s, sys: 3.21 s, total: 1min 13s\r\n# Wall time: 1min 13s\r\n# Dataset({\r\n# features: ['audio'],\r\n# num_rows: 135\r\n# })\r\n\r\n# --------------------------------\r\n%%time\r\ndef mapper_function2(batch):\r\n # list_audio\r\n return {\"audio\": [np.concatenate([audio[\"array\"] for audio in batch[\"audio\"]])]}\r\n\r\ndataset.map(\r\n mapper_function2,\r\n batched=True,\r\n batch_size=3,\r\n remove_columns=list(dataset.features),\r\n)\r\n\r\n# 100%\r\n# 135/135 [00:03<00:00, 40.69ba/s]\r\n# CPU times: user 1.88 s, sys: 1.48 s, total: 3.36 s\r\n# Wall time: 4.8 s\r\n# Dataset({\r\n# features: ['audio'],\r\n# num_rows: 135\r\n# })\r\n```\r\n",
"In the first one you get a dataset with an Audio type, and in the second one you get a dataset with a sequence of floats type.\r\n\r\nThe Audio type encodes the data as WAV to save disk space, so it takes more time to create.\r\nThe Audio type is automatically inferred because you modify the column \"audio\" which was already an Audio type. If you name it to something else, type inference will use a type struct with array and sampling rate fields."
] | 2022-12-14T18:13:55
| 2023-07-21T14:30:51
| 2023-07-21T14:30:51
|
NONE
| null | null | null | null |
### Describe the bug
I am trying to do concatenate audios in a dataset e.g. `google/fleurs`.
```python
print(dataset)
# Dataset({
# features: ['path', 'audio'],
# num_rows: 24
# })
def mapper_function(batch):
# to merge every 3 audio
# np.concatnate(audios[i: i+3]) for i in range(i, len(batch), 3)
dataset = dataset.map(mapper_function, batch=True, batch_size=24)
print(dataset)
# Expected output:
# Dataset({
# features: ['path', 'audio'],
# num_rows: 8
# })
```
I tried to construct `result={}` dictionary inside the mapper function, I just found it will not work because it needs `byte` also needed :((
I'd appreciate if your share any use cases similar to my problem or any solutions really. Thanks!
cc: @lhoestq
### Steps to reproduce the bug
1. load audio dataset
2. try to merge every k audios and return as one
### Expected behavior
Merged dataset with a fewer rows. If we merge every 3 rows, then `n // 3` number of examples.
### Environment info
- `datasets` version: 2.1.0
- Platform: Linux-5.15.65+-x86_64-with-debian-bullseye-sid
- Python version: 3.7.12
- PyArrow version: 8.0.0
- Pandas version: 1.3.5
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IterableDataset returns duplicated data using PyTorch DDP
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"If you use huggingface trainer, you will find the trainer has wrapped a `IterableDatasetShard` to avoid duplication.\r\nSee:\r\nhttps://github.com/huggingface/transformers/blob/dfd818420dcbad68e05a502495cf666d338b2bfb/src/transformers/trainer.py#L835\r\n",
"If you want to support it by datasets natively, maybe we also need to change the code in `transformers` ?",
"Opened https://github.com/huggingface/transformers/issues/20770 to discuss this :)",
"Maybe something like this then ?\r\n```python\r\nfrom datasets.distributed import split_dataset_by_node\r\nds = split_dataset_by_node(ds, rank=rank, world_size=world_size)\r\n```\r\n\r\nFor map-style datasets the implementation is trivial (it can simply use `.shard()`).\r\n\r\nFor iterable datasets we would need to implement a new ExamplesIterable that would only iterate on a subset of the (possibly shuffled and re-shuffled after each epoch) list of shards, based on the rank and world size.",
"My plan is to skip examples by default to not end up with duplicates.\r\n\r\nAnd if a dataset has a number of shards that is a factor of the world size, then I'd make it more optimized by distributing the shards evenly across nodes instead.",
"Opened a PR here: https://github.com/huggingface/datasets/pull/5369\r\n\r\nfeel free to play with it and share your feedbacks :)",
"@lhoestq I add shuffle after split_dataset_by_node, duplicated data still exist. \r\nFor example, we have a directory named `mock_pretraining_data`, which has three files, `part-00000`, `part-00002`,`part-00002`. \r\nText in `part-00000` is like this: \r\n{\"id\": 0}\r\n{\"id\": 1}\r\n{\"id\": 2}\r\n{\"id\": 3}\r\n{\"id\": 4}\r\n{\"id\": 5}\r\n{\"id\": 6}\r\n{\"id\": 7}\r\n{\"id\": 8}\r\n{\"id\": 9}\r\n\r\nand `part-00001`\r\n{\"id\": 10}\r\n{\"id\": 11}\r\n{\"id\": 12}\r\n{\"id\": 13}\r\n{\"id\": 14}\r\n{\"id\": 15}\r\n{\"id\": 16}\r\n{\"id\": 17}\r\n{\"id\": 18}\r\n{\"id\": 19}\r\n\r\nand `part-00002`\r\n{\"id\": 20}\r\n{\"id\": 21}\r\n{\"id\": 22}\r\n{\"id\": 23}\r\n{\"id\": 24}\r\n{\"id\": 25}\r\n{\"id\": 26}\r\n{\"id\": 27}\r\n{\"id\": 28}\r\n{\"id\": 29}\r\n\r\nAnd code in `test_dist.py` like this,\r\n```python\r\nimport torch\r\nfrom torch.utils.data import Dataset, DataLoader\r\nfrom datasets import load_dataset\r\nimport os\r\nfrom transformers import AutoTokenizer, NezhaForPreTraining\r\nfrom transformers import AdamW, get_linear_schedule_with_warmup\r\nimport torch.nn.functional as F\r\nimport torch.nn as nn\r\nimport torch.distributed as dist\r\nfrom datasets.distributed import split_dataset_by_node\r\nfrom torch.nn.parallel import DistributedDataParallel as DDP\r\n\r\nos.environ[\"CUDA_VISIBLE_DEVICES\"] = '5,6,7'\r\n\r\ndist.init_process_group(\"nccl\")\r\nlocal_rank = int(os.environ['LOCAL_RANK'])\r\nworld_size = torch.distributed.get_world_size()\r\ndevice = torch.device('cuda', local_rank)\r\ndata_dir = './'\r\n\r\ndef load_trainset(train_path):\r\n dataset = load_dataset('json', data_dir=os.path.join(data_dir, train_path), split='train', streaming=True)\r\n return dataset\r\n\r\ndef collate_fn(examples):\r\n input_ids = []\r\n for example in examples:\r\n input_ids.append(example['id'])\r\n return torch.LongTensor(input_ids).to(device)\r\n\r\n\r\ndataset = load_trainset('mock_pretraining_data')\r\ndataset = split_dataset_by_node(dataset, rank=local_rank, world_size=world_size).shuffle(buffer_size=512)\r\n# train_sampler = torch.utils.data.distributed.DistributedSampler(dataset)\r\nbatch_size = 3\r\nprint('batch_size: {}'.format(batch_size))\r\ntrain_dataloader = DataLoader(dataset, batch_size=batch_size, collate_fn=collate_fn)\r\n\r\nfor x in train_dataloader:\r\n print({'rank': local_rank, 'id': x})\r\n```\r\nrun `python -m torch.distributed.launch --nproc_per_node=3 test_dist.py`\r\nThe output is\r\n```\r\n{'rank': 1, 'id': tensor([12, 15, 14], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([16, 10, 18], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([17, 13, 19], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([11], device='cuda:1')}\r\n{'rank': 0, 'id': tensor([0, 2, 9], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([4, 8, 1], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([5, 3, 6], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([7], device='cuda:0')}\r\n{'rank': 2, 'id': tensor([13, 15, 14], device='cuda:2')}\r\n{'rank': 2, 'id': tensor([19, 17, 18], device='cuda:2')}\r\n{'rank': 2, 'id': tensor([12, 16, 11], device='cuda:2')}\r\n{'rank': 2, 'id': tensor([10], device='cuda:2')}\r\n```\r\n`part-00001` is loaded twice, `part-00002` isn't loaded.\r\n\r\nIf I run `python -m torch.distributed.launch --nproc_per_node=2 test_dist.py`\r\nThe output is weirder，many numbers appear twice\r\n```\r\n{'rank': 1, 'id': tensor([26, 8, 13], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([22, 19, 20], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([12, 28, 11], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([24, 2, 14], device='cuda:1')}\r\n{'rank': 1, 'id': tensor([ 6, 27, 3], device='cuda:1')}\r\n{'rank': 0, 'id': tensor([ 8, 25, 1], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([20, 4, 12], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([14, 29, 5], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([ 7, 18, 23], device='cuda:0')}\r\n{'rank': 0, 'id': tensor([19, 17, 11], device='cuda:0')}\r\n``` ",
"Hi ! Thanks for reporting, you need to pass `seed=` to `shuffle()` or the processes won't use the same seed to shuffle the shards order before assigning each shard to a node.\r\n\r\nThe issue is that the workers are not using the same seed to shuffle the shards before splitting the shards list by node.",
"Opened https://github.com/huggingface/datasets/issues/5696",
"I have the same issue\r\n```\r\nds['train'] = load_dataset(streaming=True)\r\nds['train'] = split_dataset_by_node(ds['train'], rank=int(os.environ[\"RANK\"]), world_size=int(os.environ[\"WORLD_SIZE\"]))\r\nvectorized_datasets = ds.map(\r\n prepare_dataset,\r\n remove_columns=raw_datasets_features,\r\n).with_format(\"torch\")\r\n\r\nvectorized_datasets[\"train\"] = vectorized_datasets[\"train\"].shuffle(\r\n buffer_size=500,\r\n seed=42,\r\n)\r\n\r\ndef prepare_dataset(batch):\r\n ....\r\n print(f\"sentence: {batch['sentence']}, target_text: {batch['target_text']}\")\r\n return batch\r\n```\r\nWhen using split_dataset_by_node(), the data being read is indeed different for each GPU ID.\r\n\r\n```\r\ntrainer = Trainer(\r\n model=model,\r\n data_collator=data_collator,\r\n args=training_args,\r\n compute_metrics=compute_metrics,\r\n train_dataset=vectorized_datasets[\"train\"] if training_args.do_train else None,\r\n eval_dataset=vectorized_datasets[\"eval\"] if training_args.do_eval else None,\r\n tokenizer=processor,\r\n callbacks=[ShuffleCallback()],\r\n )\r\n...\r\ntrain_result = trainer.train(resume_from_checkpoint=checkpoint)\r\n```\r\nHowever, when I execute trainer.train(), the data being read is different from what I expected.\r\nBecause I print the batch value in prepare_dataset() , I observe that the data is the same for each GPU ID.\r\n\r\nHow should I handle this issue?\r\n\r\n\r\n",
"There are two ways an iterable dataset can be split by node:\r\n1. if the number of shards is a factor of number of GPUs: in that case the shards are evenly distributed per GPU\r\n2. otherwise, each GPU iterate on the data and at the end keeps 1 sample out of n(GPUs) - skipping the others.\r\n\r\nIn case 2. it's therefore possible to have the same examples passed to `prepare_dataset` for each GPU.\r\n\r\nThis doesn't sound optimized though, because it runs the preprocessing on samples that won't be used in the end.\r\n\r\nCould you open a new issue so that we can discuss about this and find a solution ?"
] | 2022-12-14T16:06:19
| 2023-06-15T09:51:13
| 2023-01-16T13:33:33
|
MEMBER
| null | null | null | null |
As mentioned in https://github.com/huggingface/datasets/issues/3423, when using PyTorch DDP the dataset ends up with duplicated data. We already check for the PyTorch `worker_info` for single node, but we should also check for `torch.distributed.get_world_size()` and `torch.distributed.get_rank()`
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Consider using "Sequence" instead of "List"
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"Hi! Linking a comment to provide more info on the issue: https://stackoverflow.com/a/39458225. This means we should replace all (most of) the occurrences of `List` with `Sequence` in function signatures.\r\n\r\n@tranhd95 Would you be interested in submitting a PR?",
"Hi all! I tried to reproduce this issue and didn't work for me. Also in your example i noticed that the variables have different names: `list_of_filenames` and `list_of_files`, could this be related to that?\r\n```python\r\n#I found random data in parquet format:\r\n!wget \"https://github.com/Teradata/kylo/raw/master/samples/sample-data/parquet/userdata1.parquet\"\r\n!wget \"https://github.com/Teradata/kylo/raw/master/samples/sample-data/parquet/userdata2.parquet\"\r\n\r\n#Then i try reproduce\r\nlist_of_files = [\"userdata1.parquet\", \"userdata2.parquet\"]\r\nds = Dataset.from_parquet(list_of_files)\r\n```\r\n**My output:**\r\n```python\r\nWARNING:datasets.builder:Using custom data configuration default-e287d097dc54e046\r\nDownloading and preparing dataset parquet/default to /root/.cache/huggingface/datasets/parquet/default-e287d097dc54e046/0.0.0/2a3b91fbd88a2c90d1dbbb32b460cf621d31bd5b05b934492fdef7d8d6f236ec...\r\nDownloading data files: 100%\r\n1/1 [00:00<00:00, 40.38it/s]\r\nExtracting data files: 100%\r\n1/1 [00:00<00:00, 23.43it/s]\r\nDataset parquet downloaded and prepared to /root/.cache/huggingface/datasets/parquet/default-e287d097dc54e046/0.0.0/2a3b91fbd88a2c90d1dbbb32b460cf621d31bd5b05b934492fdef7d8d6f236ec. Subsequent calls will reuse this data.\r\n```\r\nP.S. This is my first experience with open source. So do not judge strictly if I do not understand something)",
"@dantema There is indeed a typo in variable names. Nevertheless, I'm sorry if I was not clear but the output is from `mypy` type checker. You can run the code snippet without issues. The problem is with the type checking.",
"However, I found out that the type annotation is actually misleading. The [`from_parquet`](https://github.com/huggingface/datasets/blob/5ef1ab1cc06c2b7a574bf2df454cd9fcb071ccb2/src/datasets/arrow_dataset.py#L1039) method should also accept list of [`PathLike`](https://github.com/huggingface/datasets/blob/main/src/datasets/utils/typing.py#L8) objects which includes [`os.PathLike`](https://docs.python.org/3/library/os.html#os.PathLike). But if I would ran the code snippet below, an exception is thrown.\r\n\r\n**Code**\r\n```py\r\nfrom pathlib import Path\r\n\r\nlist_of_filenames = [Path(\"foo.parquet\"), Path(\"bar.parquet\")]\r\nds = Dataset.from_parquet(list_of_filenames)\r\n```\r\n**Output**\r\n```py\r\n[/usr/local/lib/python3.8/dist-packages/datasets/arrow_dataset.py](https://localhost:8080/#) in from_parquet(path_or_paths, split, features, cache_dir, keep_in_memory, columns, **kwargs)\r\n 1071 from .io.parquet import ParquetDatasetReader\r\n 1072 \r\n-> 1073 return ParquetDatasetReader(\r\n 1074 path_or_paths,\r\n 1075 split=split,\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/io/parquet.py](https://localhost:8080/#) in __init__(self, path_or_paths, split, features, cache_dir, keep_in_memory, streaming, **kwargs)\r\n 35 path_or_paths = path_or_paths if isinstance(path_or_paths, dict) else {self.split: path_or_paths}\r\n 36 hash = _PACKAGED_DATASETS_MODULES[\"parquet\"][1]\r\n---> 37 self.builder = Parquet(\r\n 38 cache_dir=cache_dir,\r\n 39 data_files=path_or_paths,\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/builder.py](https://localhost:8080/#) in __init__(self, cache_dir, config_name, hash, base_path, info, features, use_auth_token, repo_id, data_files, data_dir, name, **config_kwargs)\r\n 298 \r\n 299 if data_files is not None and not isinstance(data_files, DataFilesDict):\r\n--> 300 data_files = DataFilesDict.from_local_or_remote(\r\n 301 sanitize_patterns(data_files), base_path=base_path, use_auth_token=use_auth_token\r\n 302 )\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/data_files.py](https://localhost:8080/#) in from_local_or_remote(cls, patterns, base_path, allowed_extensions, use_auth_token)\r\n 794 for key, patterns_for_key in patterns.items():\r\n 795 out[key] = (\r\n--> 796 DataFilesList.from_local_or_remote(\r\n 797 patterns_for_key,\r\n 798 base_path=base_path,\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/data_files.py](https://localhost:8080/#) in from_local_or_remote(cls, patterns, base_path, allowed_extensions, use_auth_token)\r\n 762 ) -> \"DataFilesList\":\r\n 763 base_path = base_path if base_path is not None else str(Path().resolve())\r\n--> 764 data_files = resolve_patterns_locally_or_by_urls(base_path, patterns, allowed_extensions)\r\n 765 origin_metadata = _get_origin_metadata_locally_or_by_urls(data_files, use_auth_token=use_auth_token)\r\n 766 return cls(data_files, origin_metadata)\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/data_files.py](https://localhost:8080/#) in resolve_patterns_locally_or_by_urls(base_path, patterns, allowed_extensions)\r\n 357 data_files = []\r\n 358 for pattern in patterns:\r\n--> 359 if is_remote_url(pattern):\r\n 360 data_files.append(Url(pattern))\r\n 361 else:\r\n\r\n[/usr/local/lib/python3.8/dist-packages/datasets/utils/file_utils.py](https://localhost:8080/#) in is_remote_url(url_or_filename)\r\n 62 \r\n 63 def is_remote_url(url_or_filename: str) -> bool:\r\n---> 64 parsed = urlparse(url_or_filename)\r\n 65 return parsed.scheme in (\"http\", \"https\", \"s3\", \"gs\", \"hdfs\", \"ftp\")\r\n 66 \r\n\r\n[/usr/lib/python3.8/urllib/parse.py](https://localhost:8080/#) in urlparse(url, scheme, allow_fragments)\r\n 373 Note that we don't break the components up in smaller bits\r\n 374 (e.g. netloc is a single string) and we don't expand % escapes.\"\"\"\r\n--> 375 url, scheme, _coerce_result = _coerce_args(url, scheme)\r\n 376 splitresult = urlsplit(url, scheme, allow_fragments)\r\n 377 scheme, netloc, url, query, fragment = splitresult\r\n\r\n[/usr/lib/python3.8/urllib/parse.py](https://localhost:8080/#) in _coerce_args(*args)\r\n 125 if str_input:\r\n 126 return args + (_noop,)\r\n--> 127 return _decode_args(args) + (_encode_result,)\r\n 128 \r\n 129 # Result objects are more helpful than simple tuples\r\n\r\n[/usr/lib/python3.8/urllib/parse.py](https://localhost:8080/#) in _decode_args(args, encoding, errors)\r\n 109 def _decode_args(args, encoding=_implicit_encoding,\r\n 110 errors=_implicit_errors):\r\n--> 111 return tuple(x.decode(encoding, errors) if x else '' for x in args)\r\n 112 \r\n 113 def _coerce_args(*args):\r\n\r\n[/usr/lib/python3.8/urllib/parse.py](https://localhost:8080/#) in <genexpr>(.0)\r\n 109 def _decode_args(args, encoding=_implicit_encoding,\r\n 110 errors=_implicit_errors):\r\n--> 111 return tuple(x.decode(encoding, errors) if x else '' for x in args)\r\n 112 \r\n 113 def _coerce_args(*args):\r\n\r\nAttributeError: 'PosixPath' object has no attribute 'decode'\r\n```\r\n\r\n@mariosasko Should I create a new issue? ",
"@mariosasko I would like to take this issue up. ",
"@avinashsai Hi, I've assigned you the issue.\r\n\r\n@tranhd95 Yes, feel free to report this in a new issue.",
"@avinashsai Are you still working on this? If not I would like to give it a try.",
"@mariosasko I would like to take this issue up!",
"Hi @tranhd95 @mariosasko ,I hope you all are doing well.\r\n\r\nI am interested in this issue, is this still open and unresolved ?\r\n\r\nThanks and Regards",
"@mariosasko I would like to take this issue up.",
"Hi @mariosasko, I’d like to work on this issue. I’ll start by replacing List with Sequence in relevant function signatures and ensure type checking passes. Let me know if there are any specific files to prioritize.",
"Hi @mariosasko, can I please work on this issue?",
"Hi, I’m new to this repo and would love to work on this issue. Is it still available?"
] | 2022-12-12T15:39:45
| 2025-11-21T22:35:10
| null |
NONE
| null | null | null | null |
### Feature request
Hi, please consider using `Sequence` type annotation instead of `List` in function arguments such as in [`Dataset.from_parquet()`](https://github.com/huggingface/datasets/blob/main/src/datasets/arrow_dataset.py#L1088). It leads to type checking errors, see below.
**How to reproduce**
```py
list_of_filenames = ["foo.parquet", "bar.parquet"]
ds = Dataset.from_parquet(list_of_filenames)
```
**Expected mypy output:**
```
Success: no issues found
```
**Actual mypy output:**
```py
test.py:19: error: Argument 1 to "from_parquet" of "Dataset" has incompatible type "List[str]"; expected "Union[Union[str, bytes, PathLike[Any]], List[Union[str, bytes, PathLike[Any]]]]" [arg-type]
test.py:19: note: "List" is invariant -- see https://mypy.readthedocs.io/en/stable/common_issues.html#variance
test.py:19: note: Consider using "Sequence" instead, which is covariant
```
**Env:** mypy 0.991, Python 3.10.0, datasets 2.7.1
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| 5,353
|
Support remote file systems for `Audio`
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"Just seen https://github.com/huggingface/datasets/issues/5281"
] | 2022-12-12T13:22:13
| 2022-12-12T13:37:14
| 2022-12-12T13:37:14
|
NONE
| null | null | null | null |
### Feature request
Hi there!
It would be super cool if `Audio()`, and potentially other features, could read files from a remote file system.
### Motivation
Large amounts of data is often stored in buckets. `load_from_disk` is able to retrieve data from cloud storage but to my knowledge actually copies the datasets across first, so if you're working off a system with smaller disk specs (like a VM), you can run out of space very quickly.
### Your contribution
Something like this (for Google Cloud Platform in this instance):
```python
from datasets import Dataset, Audio
import gcsfs
fs = gcsfs.GCSFileSystem()
list_of_audio_fp = {'audio': ['1', '2', '3']}
ds = Dataset.from_dict(list_of_audio_fp)
ds = ds.cast_column("audio", Audio(sampling_rate=16000, fs=fs))
```
Under the hood:
```python
import librosa
from io import BytesIO
def load_audio(fp, sampling_rate=None, fs=None):
if fs is not None:
with fs.open(fp, 'rb') as f:
arr, sr = librosa.load(BytesIO(f), sr=sampling_rate)
else:
# Perform existing io operations
```
Written from memory so some things could be wrong.
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__init__() got an unexpected keyword argument 'input_size'
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[
"Hi @J-shel, thanks for reporting.\r\n\r\nI think the issue comes from your call to `load_dataset`. As first argument, you should pass:\r\n- either the name of your dataset (\"mrf\") if this is already published on the Hub\r\n- or the path to the loading script of your dataset (\"path/to/your/local/mrf.py\").",
"Hi, following your suggestion, I changed my call to load_dataset. Below is the latest:\r\nreader = load_dataset('data/mrf.py',\"default\", input_size=1024, split=split, streaming=True, keep_in_memory=None)\r\nHowever, I still got the same error.\r\nI have one question that is if I only define input_size=2048 in BUILDER_CONFIGS, may I specify input_size=1024 when loading the dataset? Cause I found that I could only specify name=\"default\" since I only define name=\"default\" in BUILDER_CONFIGS."
] | 2022-12-12T02:52:03
| 2022-12-19T01:38:48
| null |
NONE
| null | null | null | null |
### Describe the bug
I try to define a custom configuration with a input_size attribute following the instructions by "Specifying several dataset configurations" in https://huggingface.co/docs/datasets/v1.2.1/add_dataset.html
But when I load the dataset, I got an error "__init__() got an unexpected keyword argument 'input_size'"
### Steps to reproduce the bug
Following is the code to define the dataset:
class CsvConfig(datasets.BuilderConfig):
"""BuilderConfig for CSV."""
input_size: int = 2048
class MRF(datasets.ArrowBasedBuilder):
"""Archival MRF data"""
BUILDER_CONFIG_CLASS = CsvConfig
VERSION = datasets.Version("1.0.0")
BUILDER_CONFIGS = [
CsvConfig(name="default", version=VERSION, description="MRF data", input_size=2048),
]
...
def _generate_examples(self):
input_size = self.config.input_size
if input_size > 1000:
numin = 10000
else:
numin = 15000
Below is the code to load the dataset:
reader = load_dataset("default", input_size=1024)
### Expected behavior
I hope to pass the "input_size" parameter to MRF datasets, and change "input_size" to any value when loading the datasets.
### Environment info
- `datasets` version: 2.5.1
- Platform: Linux-4.18.0-305.3.1.el8.x86_64-x86_64-with-glibc2.31
- Python version: 3.9.12
- PyArrow version: 9.0.0
- Pandas version: 1.5.0
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Do we need to implement `_prepare_split`?
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[
"Hi! `DatasetBuilder` is a parent class for concrete builders: `GeneratorBasedBuilder`, `ArrowBasedBuilder` and `BeamBasedBuilder`. When writing a builder script, these classes are the ones you should inherit from. And since all of them implement `_prepare_split`, you only have to implement the three methods mentioned above.",
"Thanks so much @mariosasko for the fast response! I've been referencing [this page in the docs](https://huggingface.co/docs/datasets/v2.4.0/en/about_dataset_load) because it it pretty comprehensive in terms of what we have to do and I figured since we subclass the `BuilderConfig` the same pattern would hold, but I've also seen the page with those sub-classed builders as well, so that fills in a knowledge gap for me.",
"cc @stevhliu who may have some ideas on how to improve this part of the docs.",
"one more question for my understanding @mariosasko. the requirement of a loading script has always seemed counterintuitive to me. if i have to provide a script with every dataset, what is the point of using `datasets` if we're doing all the work of loading it, I can just do that in my code and skip the datasets integration (this of course discounts other potential benefits around metadata management, etc., my example is just simplest use case though for the sake of discussion).\r\n\r\nso i figured I would implement my own `BuilderConfig` and `DatasetBuilder` to handle that portion of it and not have to make a script. i _thought_ this would result in `datasets` (via `download_and_prepare`) then making me something that I could load using `load_dataset` moving forward.\r\n\r\nConcretely, i envisioned this pattern being possible:\r\n\r\n ```\r\nclass MyBuilderConfig(BuilderConfig):\r\n def __init__(self, name=\"my_named_dataset\", ...):\r\n super().__init__(name, ...)\r\n\r\nclass MyDatasetBuilder(GeneratorBasedBuilder):\r\n BUILDER_CONFIG_CLASS = MyBuilderConfig\r\n ....\r\n\r\nmy_builder = MyDatasetBuilder(...)\r\n\r\n# this doesn't exactly work like I thought; I don't get a dataset back, but NoneType instead\r\n# though I can see it loading the files and it generates the cache, etc.\r\nmy_dataset = my_builder.download_and_prepare()\r\n\r\n# load the dataset in the future by referencing it by name and loading from the cached arrow version\r\nnew_instance_of_my_dataset = load_dataset(\"my_named_dataset\")\r\n```\r\n\r\nI've seen references to the `save_to_disk` method which might be the next step I need in order to load it by name, in which case, that makes sense, then i just need to debug why `download_and_prepare` isn't returning me a dataset, but I feel like I still have a larger conceptual knowledge gap on how to use the library correctly.\r\n\r\nThanks again in advance!",
"> the requirement of a loading script has always seemed counterintuitive to me\r\n\r\nThis is a requirement only for datasets not stored in standard formats such as CSV, JSON, SQL, Parquet, ImageFolder, etc. \r\n\r\n> if i have to provide a script with every dataset, what is the point of using datasets if we're doing all the work of loading it, I can just do that in my code and skip the datasets integration (this of course discounts other potential benefits around metadata management, etc., my example is just simplest use case though for the sake of discussion)\r\n\r\nOur README/documentation lists the main features... \r\n\r\nOne of the main ones is that our library makes it easy to work with datasets larger than RAM (thanks to Arrow and the caching mechanism), and this is not trivial to implement.\r\n\r\nRegarding the step-by-step builder, this is the pattern:\r\n```python\r\nfrom datasets import load_dataset_builder\r\nbuilder = load_dataset_builder(\"path/to/script\") # or direct instantiation with MyDatasetBuilder(...)\r\nbuilder.download_and_prepare()\r\ndset = builder.as_dataset()\r\n```",
"ok, that makes sense. thank you @mariosasko. I realized i'd never looked on the hub at any of the files associated with any datasets. just did that now and it appears that i'll need to have a script regardless _but_ that will just contain my custom config and builder classes, so without realizing it I was already making my script, I just need to wrap that in a file that sits alongside my data (I looked at Glue and realized I was already doing what I thought didn't make sense to have to do, lol).\r\n\r\n`download_and_prepare` isn't returning me a dataset though, but I'll look into that and open another issue if I can't figure it out.",
"`download_and_prepare` downloads and prepares the arrow files. You need to call `as_dataset` on the builder to get the dataset.",
"ok, I think I was assigning the output of `builder.download_and_prepare` but it's an inplace op, so that explains the `NoneType` i was getting back. Now I'm getting:\r\n\r\n```\r\nArrowInvalid Traceback (most recent call last)\r\n<ipython-input-7-3ed50fb87c70> in <module>\r\n----> 1 ds = dataset_builder.as_dataset()\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/builder.py in as_dataset(self, split, run_post_process, ignore_verifications, in_memory)\r\n 1020 \r\n 1021 # Create a dataset for each of the given splits\r\n-> 1022 datasets = map_nested(\r\n 1023 partial(\r\n 1024 self._build_single_dataset,\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/utils/py_utils.py in map_nested(function, data_struct, dict_only, map_list, map_tuple, map_numpy, num_proc, parallel_min_length, types, disable_tqdm, desc)\r\n 442 num_proc = 1\r\n 443 if num_proc <= 1 or len(iterable) < parallel_min_length:\r\n--> 444 mapped = [\r\n 445 _single_map_nested((function, obj, types, None, True, None))\r\n 446 for obj in logging.tqdm(iterable, disable=disable_tqdm, desc=desc)\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/utils/py_utils.py in <listcomp>(.0)\r\n 443 if num_proc <= 1 or len(iterable) < parallel_min_length:\r\n 444 mapped = [\r\n--> 445 _single_map_nested((function, obj, types, None, True, None))\r\n 446 for obj in logging.tqdm(iterable, disable=disable_tqdm, desc=desc)\r\n 447 ]\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/utils/py_utils.py in _single_map_nested(args)\r\n 344 # Singleton first to spare some computation\r\n 345 if not isinstance(data_struct, dict) and not isinstance(data_struct, types):\r\n--> 346 return function(data_struct)\r\n 347 \r\n 348 # Reduce logging to keep things readable in multiprocessing with tqdm\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/builder.py in _build_single_dataset(self, split, run_post_process, ignore_verifications, in_memory)\r\n 1051 \r\n 1052 # Build base dataset\r\n-> 1053 ds = self._as_dataset(\r\n 1054 split=split,\r\n 1055 in_memory=in_memory,\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/builder.py in _as_dataset(self, split, in_memory)\r\n 1120 \"\"\"\r\n 1121 cache_dir = self._fs._strip_protocol(self._output_dir)\r\n-> 1122 dataset_kwargs = ArrowReader(cache_dir, self.info).read(\r\n 1123 name=self.name,\r\n 1124 instructions=split,\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/arrow_reader.py in read(self, name, instructions, split_infos, in_memory)\r\n 236 msg = f'Instruction \"{instructions}\" corresponds to no data!'\r\n 237 raise ValueError(msg)\r\n--> 238 return self.read_files(files=files, original_instructions=instructions, in_memory=in_memory)\r\n 239 \r\n 240 def read_files(\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/arrow_reader.py in read_files(self, files, original_instructions, in_memory)\r\n 257 \"\"\"\r\n 258 # Prepend path to filename\r\n--> 259 pa_table = self._read_files(files, in_memory=in_memory)\r\n 260 # If original_instructions is not None, convert it to a human-readable NamedSplit\r\n 261 if original_instructions is not None:\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/arrow_reader.py in _read_files(self, files, in_memory)\r\n 192 f[\"filename\"] = os.path.join(self._path, f[\"filename\"])\r\n 193 for f_dict in files:\r\n--> 194 pa_table: Table = self._get_table_from_filename(f_dict, in_memory=in_memory)\r\n 195 pa_tables.append(pa_table)\r\n 196 pa_tables = [t for t in pa_tables if len(t) > 0]\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/arrow_reader.py in _get_table_from_filename(self, filename_skip_take, in_memory)\r\n 327 filename_skip_take[\"take\"] if \"take\" in filename_skip_take else None,\r\n 328 )\r\n--> 329 table = ArrowReader.read_table(filename, in_memory=in_memory)\r\n 330 if take == -1:\r\n 331 take = len(table) - skip\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/arrow_reader.py in read_table(filename, in_memory)\r\n 348 \"\"\"\r\n 349 table_cls = InMemoryTable if in_memory else MemoryMappedTable\r\n--> 350 return table_cls.from_file(filename)\r\n 351 \r\n 352 \r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/table.py in from_file(cls, filename, replays)\r\n 1034 @classmethod\r\n 1035 def from_file(cls, filename: str, replays=None):\r\n-> 1036 table = _memory_mapped_arrow_table_from_file(filename)\r\n 1037 table = cls._apply_replays(table, replays)\r\n 1038 return cls(table, filename, replays)\r\n\r\n/databricks/python/lib/python3.8/site-packages/datasets/table.py in _memory_mapped_arrow_table_from_file(filename)\r\n 48 def _memory_mapped_arrow_table_from_file(filename: str) -> pa.Table:\r\n 49 memory_mapped_stream = pa.memory_map(filename)\r\n---> 50 opened_stream = pa.ipc.open_stream(memory_mapped_stream)\r\n 51 pa_table = opened_stream.read_all()\r\n 52 return pa_table\r\n\r\n/databricks/python/lib/python3.8/site-packages/pyarrow/ipc.py in open_stream(source)\r\n 152 reader : RecordBatchStreamReader\r\n 153 \"\"\"\r\n--> 154 return RecordBatchStreamReader(source)\r\n 155 \r\n 156 \r\n\r\n/databricks/python/lib/python3.8/site-packages/pyarrow/ipc.py in __init__(self, source)\r\n 43 \r\n 44 def __init__(self, source):\r\n---> 45 self._open(source)\r\n 46 \r\n 47 \r\n\r\n/databricks/python/lib/python3.8/site-packages/pyarrow/ipc.pxi in pyarrow.lib._RecordBatchStreamReader._open()\r\n\r\n/databricks/python/lib/python3.8/site-packages/pyarrow/error.pxi in pyarrow.lib.pyarrow_internal_check_status()\r\n\r\n/databricks/python/lib/python3.8/site-packages/pyarrow/error.pxi in pyarrow.lib.check_status()\r\n\r\nArrowInvalid: Tried reading schema message, was null or length 0\r\n```\r\n\r\n",
"looks like my arrow files are all empty @mariosasko \r\n\r\n\r\n\r\n\r\ni also see the `incomplete_info.lock` file a level up too. seems like the data isn't being persisted to disk when I call `download_and_prepare`. is there something else i need to do before then, perhaps?",
"quick update @mariosasko. i got it working! i had to downgrade to `datasets==2.4.0`. testing other versions now and will let you know the results.",
"I've tested with every version of `datasets>2.4.0` and i get the same error with all of them."
] | 2022-12-12T01:38:54
| 2022-12-20T18:20:57
| 2022-12-12T16:48:56
|
NONE
| null | null | null | null |
### Describe the bug
I'm not sure this is a bug or if it's just missing in the documentation, or i'm not doing something correctly, but I'm subclassing `DatasetBuilder` and getting the following error because on the `DatasetBuilder` class the `_prepare_split` method is abstract (as are the others we are required to implement, hence the genesis of my question):
```
Traceback (most recent call last):
File "/home/jason/source/python/prism_machine_learning/examples/create_hf_datasets.py", line 28, in <module>
dataset_builder.download_and_prepare()
File "/home/jason/.virtualenvs/pml/lib/python3.8/site-packages/datasets/builder.py", line 704, in download_and_prepare
self._download_and_prepare(
File "/home/jason/.virtualenvs/pml/lib/python3.8/site-packages/datasets/builder.py", line 793, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/home/jason/.virtualenvs/pml/lib/python3.8/site-packages/datasets/builder.py", line 1124, in _prepare_split
raise NotImplementedError()
NotImplementedError
```
### Steps to reproduce the bug
I will share implementation if it turns out that everything should be working (i.e. we only need to implement those 3 methods the docs mention), but I don't want to distract from the original question.
### Expected behavior
I just need to know if there are additional methods we need to implement when subclassing `DatasetBuilder` besides what the documentation specifies -> `_info`, `_split_generators` and `_generate_examples`
### Environment info
- `datasets` version: 2.4.0
- Platform: Linux-5.4.0-135-generic-x86_64-with-glibc2.2.5
- Python version: 3.8.12
- PyArrow version: 7.0.0
- Pandas version: 1.4.1
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| 5,348
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The data downloaded in the download folder of the cache does not respect `umask`
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[
"note, that `datasets` already did some of that umask fixing in the past and also at the hub - the recent work on the hub about the same: https://github.com/huggingface/huggingface_hub/pull/1220\r\n\r\nAlso I noticed that each file has a .json counterpart and the latter always has the correct perms:\r\n\r\n```\r\n-rw------- 1 uue59kq cnw 173M Dec 9 01:37 537596e64721e2ae3d98785b91d30fda0360c196a8224e29658ad629e7303a4d\r\n-rw-rw---- 1 uue59kq cnw 101 Dec 9 01:37 537596e64721e2ae3d98785b91d30fda0360c196a8224e29658ad629e7303a4d.json\r\n```\r\n\r\nso perhaps cheating is possible and syncing the perms between the 2 will do the trick."
] | 2022-12-09T15:46:27
| 2022-12-09T17:21:26
| null |
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
For a project on a cluster we are several users to share the same cache for the datasets library. And we have a problem with the permissions on the data downloaded in the cache.
Indeed, it seems that the data is downloaded by giving read and write permissions only to the user launching the command (and no permissions to the group). In our case, those permissions don't respect the `umask` of this user, which was `0007`.
Traceback:
```
Using custom data configuration default
Downloading and preparing dataset text_caps/default to /gpfswork/rech/cnw/commun/datasets/HuggingFaceM4___text_caps/default/1.0.0/2b9ad220cd90fcf2bfb454645bc54364711b83d6d39401ffdaf8cc40882e9141...
Downloading data files: 100%|████████████████████| 3/3 [00:00<00:00, 921.62it/s]
---------------------------------------------------------------------------
PermissionError Traceback (most recent call last)
Cell In [3], line 1
----> 1 ds = load_dataset(dataset_name)
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/load.py:1746, in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, **config_kwargs)
1743 try_from_hf_gcs = path not in _PACKAGED_DATASETS_MODULES
1745 # Download and prepare data
-> 1746 builder_instance.download_and_prepare(
1747 download_config=download_config,
1748 download_mode=download_mode,
1749 ignore_verifications=ignore_verifications,
1750 try_from_hf_gcs=try_from_hf_gcs,
1751 use_auth_token=use_auth_token,
1752 )
1754 # Build dataset for splits
1755 keep_in_memory = (
1756 keep_in_memory if keep_in_memory is not None else is_small_dataset(builder_instance.info.dataset_size)
1757 )
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/builder.py:704, in DatasetBuilder.download_and_prepare(self, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, **download_and_prepare_kwargs)
702 logger.warning("HF google storage unreachable. Downloading and preparing it from source")
703 if not downloaded_from_gcs:
--> 704 self._download_and_prepare(
705 dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
706 )
707 # Sync info
708 self.info.dataset_size = sum(split.num_bytes for split in self.info.splits.values())
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/builder.py:1227, in GeneratorBasedBuilder._download_and_prepare(self, dl_manager, verify_infos)
1226 def _download_and_prepare(self, dl_manager, verify_infos):
-> 1227 super()._download_and_prepare(dl_manager, verify_infos, check_duplicate_keys=verify_infos)
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/builder.py:771, in DatasetBuilder._download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
769 split_dict = SplitDict(dataset_name=self.name)
770 split_generators_kwargs = self._make_split_generators_kwargs(prepare_split_kwargs)
--> 771 split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
773 # Checksums verification
774 if verify_infos and dl_manager.record_checksums:
File /gpfswork/rech/cnw/commun/modules/datasets_modules/datasets/HuggingFaceM4--TextCaps/2b9ad220cd90fcf2bfb454645bc54364711b83d6d39401ffdaf8cc40882e9141/TextCaps.py:125, in TextCapsDataset._split_generators(self, dl_manager)
123 def _split_generators(self, dl_manager):
124 # urls = _URLS[self.config.name] # TODO later
--> 125 data_dir = dl_manager.download_and_extract(_URLS)
126 gen_kwargs = {
127 split_name: {
128 f"{dir_name}_path": Path(data_dir[dir_name][split_name])
(...)
133 for split_name in ["train", "val", "test"]
134 }
136 for split_name in ["train", "val", "test"]:
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/download/download_manager.py:431, in DownloadManager.download_and_extract(self, url_or_urls)
415 def download_and_extract(self, url_or_urls):
416 """Download and extract given url_or_urls.
417
418 Is roughly equivalent to:
(...)
429 extracted_path(s): `str`, extracted paths of given URL(s).
430 """
--> 431 return self.extract(self.download(url_or_urls))
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/download/download_manager.py:324, in DownloadManager.download(self, url_or_urls)
321 self.downloaded_paths.update(dict(zip(url_or_urls.flatten(), downloaded_path_or_paths.flatten())))
323 start_time = datetime.now()
--> 324 self._record_sizes_checksums(url_or_urls, downloaded_path_or_paths)
325 duration = datetime.now() - start_time
326 logger.info(f"Checksum Computation took {duration.total_seconds() // 60} min")
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/download/download_manager.py:229, in DownloadManager._record_sizes_checksums(self, url_or_urls, downloaded_path_or_paths)
226 """Record size/checksum of downloaded files."""
227 for url, path in zip(url_or_urls.flatten(), downloaded_path_or_paths.flatten()):
228 # call str to support PathLike objects
--> 229 self._recorded_sizes_checksums[str(url)] = get_size_checksum_dict(
230 path, record_checksum=self.record_checksums
231 )
File /gpfswork/rech/cnw/commun/conda/lucile-m4_3/lib/python3.8/site-packages/datasets/utils/info_utils.py:82, in get_size_checksum_dict(path, record_checksum)
80 if record_checksum:
81 m = sha256()
---> 82 with open(path, "rb") as f:
83 for chunk in iter(lambda: f.read(1 << 20), b""):
84 m.update(chunk)
PermissionError: [Errno 13] Permission denied: '/gpfswork/rech/cnw/commun/datasets/downloads/1e6aa6d23190c30885194fabb193dce3874d902d7636b66315ee8aaa584e80d6'
```
### Steps to reproduce the bug
I think the following will reproduce the bug.
Given 2 users belonging to the same group with `umask` set to `0007`
- first run with User 1:
```python
from datasets import load_dataset
ds_name = "HuggingFaceM4/VQAv2"
ds = load_dataset(ds_name)
```
- then run with User 2:
```python
from datasets import load_dataset
ds_name = "HuggingFaceM4/TextCaps"
ds = load_dataset(ds_name)
```
### Expected behavior
No `PermissionError`
### Environment info
- `datasets` version: 2.4.0
- Platform: Linux-4.18.0-305.65.1.el8_4.x86_64-x86_64-with-glibc2.17
- Python version: 3.8.13
- PyArrow version: 7.0.0
- Pandas version: 1.4.2
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[
"As the survey is finished, can we close this issue, @LysandreJik ?",
"Yes! I'll post a public summary on the forums shortly.",
"Is the summary available? I would be interested in reading your findings."
] | 2022-12-09T14:48:02
| 2023-06-02T20:24:44
| 2023-01-25T19:35:40
|
MEMBER
| null | null | null | null |
Thanks to all of you, Datasets is just about to pass 15k stars!
Since the last survey, a lot has happened: the [diffusers](https://github.com/huggingface/diffusers), [evaluate](https://github.com/huggingface/evaluate) and [skops](https://github.com/skops-dev/skops) libraries were born. `timm` joined the Hugging Face ecosystem. There were 25 new releases of `transformers`, 21 new releases of `datasets`, 13 new releases of `accelerate`.
If you have a couple of minutes and want to participate in shaping the future of the ecosystem, please share your thoughts:
[**hf.co/oss-survey**](https://docs.google.com/forms/d/e/1FAIpQLSf4xFQKtpjr6I_l7OfNofqiR8s-WG6tcNbkchDJJf5gYD72zQ/viewform?usp=sf_link)
(please reply in the above feedback form rather than to this thread)
Thank you all on behalf of the HuggingFace team! 🤗
|
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| 47 days, 4:47:38
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https://api.github.com/repos/huggingface/datasets/issues/5345
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I_kwDODunzps5Ymwj4
| 5,345
|
Wrong dtype for array in audio features
|
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[
"After some more investigation, this is due to [this line of code](https://github.com/huggingface/datasets/blob/main/src/datasets/features/audio.py#L279). The function `sf.read(file)` should be updated to `sf.read(file, dtype=\"float32\")`\r\n\r\nIndeed, the default value in soundfile is `float64` ([see here](https://pysoundfile.readthedocs.io/en/latest/#soundfile.read)). \r\n",
"@qmeeus I agree, decoding of different audio formats should return the same dtypes indeed!\r\n\r\nBut note that here you are concatenating datasets with different sampling rates: 48000 for CommonVoice and 16000 for Voxpopuli. So you should cast them to the same sampling rate value before interleaving, for example:\r\n```\r\ncv = cv.cast_column(\"audio\", Audio(sampling_rate=16000))\r\n```\r\notherwise you would get the same error because features of the same column (\"audio\") are not the same.\r\n\r\nAlso, the error you get is unexpected. Could you please confirm that you use the latest main version of the `datasets`? We had an issue that could lead to an error like this after using `rename_column` method, but it was fixed in https://github.com/huggingface/datasets/pull/5287 ",
"Hi Polina,\r\nSorry for the late answer\r\nIt is possible that the issue was due to a bug that is now fixed. I installed an editable version of datasets from github, but I don't recall whether I had updated it at the time of the issue. My research led me to other directions so I did not follow through on the interleave datasets.\r\n"
] | 2022-12-09T11:05:11
| 2023-02-10T14:39:28
| null |
NONE
| null | null | null | null |
### Describe the bug
When concatenating/interleaving different datasets, I stumble into an error because the features can't be aligned. After some investigation, I understood that the audio arrays had different dtypes, namely `float32` and `float64`. Consequently, the datasets cannot be merged.
### Steps to reproduce the bug
For example, for `facebook/voxpopuli` and `mozilla-foundation/common_voice_11_0`:
```
from datasets import load_dataset, interleave_datasets
covost = load_dataset("mozilla-foundation/common_voice_11_0", "en", split="train", streaming=True)
voxpopuli = datasets.load_dataset("facebook/voxpopuli", "nl", split="train", streaming=True)
sample_cv, = covost.take(1)
sample_vp, = voxpopuli.take(1)
assert sample_cv["audio"]["array"].dtype == sample_vp["audio"]["array"].dtype
# Fails
dataset = interleave_datasets([covost, voxpopuli])
# ValueError: The features can't be aligned because the key audio of features {'audio_id': Value(dtype='string', id=None), 'language': Value(dtype='int64', id=None), 'audio': {'array': Sequence(feature=Value(dtype='float64', id=None), length=-1, id=None), 'path': Value(dtype='string', id=None), 'sampling_rate': Value(dtype='int64', id=None)}, 'normalized_text': Value(dtype='string', id=None), 'gender': Value(dtype='string', id=None), 'speaker_id': Value(dtype='string', id=None), 'is_gold_transcript': Value(dtype='bool', id=None), 'accent': Value(dtype='string', id=None), 'sentence': Value(dtype='string', id=None)} has unexpected type - {'array': Sequence(feature=Value(dtype='float64', id=None), length=-1, id=None), 'path': Value(dtype='string', id=None), 'sampling_rate': Value(dtype='int64', id=None)} (expected either Audio(sampling_rate=16000, mono=True, decode=True, id=None) or Value("null").
```
### Expected behavior
The audio should be loaded to arrays with a unique dtype (I guess `float32`)
### Environment info
```
- `datasets` version: 2.7.1.dev0
- Platform: Linux-4.18.0-425.3.1.el8.x86_64-x86_64-with-glibc2.28
- Python version: 3.9.15
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
```
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I_kwDODunzps5Yh9if
| 5,343
|
T5 for Q&A produces truncated sentence
|
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[] | 2022-12-08T19:48:46
| 2022-12-08T19:57:17
| 2022-12-08T19:57:17
|
NONE
| null | null | null | null |
Dear all, I am fine-tuning T5 for Q&A task using the MedQuAD ([GitHub - abachaa/MedQuAD: Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites](https://github.com/abachaa/MedQuAD)) dataset. In the dataset, there are many long answers with thousands of words. I have used pytorch_lightning to train the T5-large model. I have two questions.
For example, I set both the max_length, max_input_length, max_output_length to 128.
How to deal with those long answers? I just left them as is and the T5Tokenizer can automatically handle. I would assume the tokenizer just truncates an answer at the position of 128th word (or 127th). Is it possible that I manually split an answer into different parts, each part has 128 words; and then all these sub-answers serve as a separate answer to the same question?
Another question is that I get incomplete (truncated) answers when using the fine-tuned model in inference, even though the predicted answer is shorter than 128 words. I found a message posted 2 years ago saying that one should add at the end of texts when fine-tuning T5. I followed that but then got a warning message that duplicated were found. I am assuming that this is because the tokenizer truncates an answer text, thus is missing in the truncated answer, such that the end token is not produced in predicted answer. However, I am not sure. Can anybody point out how to address this issue?
Any suggestions are highly appreciated.
Below is some code snippet.
`
import pytorch_lightning as pl
from torch.utils.data import DataLoader
import torch
import numpy as np
import time
from pathlib import Path
from transformers import (
Adafactor,
T5ForConditionalGeneration,
T5Tokenizer,
get_linear_schedule_with_warmup
)
from torch.utils.data import RandomSampler
from question_answering.utils import *
class T5FineTuner(pl.LightningModule):
def __init__(self, hyparams):
super(T5FineTuner, self).__init__()
self.hyparams = hyparams
self.model = T5ForConditionalGeneration.from_pretrained(hyparams.model_name_or_path)
self.tokenizer = T5Tokenizer.from_pretrained(hyparams.tokenizer_name_or_path)
if self.hyparams.freeze_embeds:
self.freeze_embeds()
if self.hyparams.freeze_encoder:
self.freeze_params(self.model.get_encoder())
# assert_all_frozen()
self.step_count = 0
self.output_dir = Path(self.hyparams.output_dir)
n_observations_per_split = {
'train': self.hyparams.n_train,
'validation': self.hyparams.n_val,
'test': self.hyparams.n_test
}
self.n_obs = {k: v if v >= 0 else None for k, v in n_observations_per_split.items()}
self.em_score_list = []
self.subset_score_list = []
data_folder = r'C:\Datasets\MedQuAD-master'
self.train_data, self.val_data, self.test_data = load_medqa_data(data_folder)
def freeze_params(self, model):
for param in model.parameters():
param.requires_grad = False
def freeze_embeds(self):
try:
self.freeze_params(self.model.model.shared)
for d in [self.model.model.encoder, self.model.model.decoder]:
self.freeze_params(d.embed_positions)
self.freeze_params(d.embed_tokens)
except AttributeError:
self.freeze_params(self.model.shared)
for d in [self.model.encoder, self.model.decoder]:
self.freeze_params(d.embed_tokens)
def lmap(self, f, x):
return list(map(f, x))
def is_logger(self):
return self.trainer.proc_rank <= 0
def forward(self, input_ids, attention_mask=None, decoder_input_ids=None, decoder_attention_mask=None, labels=None):
return self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
labels=labels
)
def _step(self, batch):
labels = batch['target_ids']
labels[labels[:, :] == self.tokenizer.pad_token_id] = -100
outputs = self(
input_ids = batch['source_ids'],
attention_mask=batch['source_mask'],
labels=labels,
decoder_attention_mask=batch['target_mask']
)
loss = outputs[0]
return loss
def ids_to_clean_text(self, generated_ids):
gen_text = self.tokenizer.batch_decode(generated_ids, skip_special_tokens=True, clean_up_tokenization_spaces=True)
return self.lmap(str.strip, gen_text)
def _generative_step(self, batch):
t0 = time.time()
generated_ids = self.model.generate(
batch["source_ids"],
attention_mask=batch["source_mask"],
use_cache=True,
decoder_attention_mask=batch['target_mask'],
max_length=128,
num_beams=2,
early_stopping=True
)
preds = self.ids_to_clean_text(generated_ids)
targets = self.ids_to_clean_text(batch["target_ids"])
gen_time = (time.time() - t0) / batch["source_ids"].shape[0]
loss = self._step(batch)
base_metrics = {'val_loss': loss}
summ_len = np.mean(self.lmap(len, generated_ids))
base_metrics.update(gen_time=gen_time, gen_len=summ_len, preds=preds, target=targets)
em_score, subset_match_score = calculate_scores(preds, targets)
self.em_score_list.append(em_score)
self.subset_score_list.append(subset_match_score)
em_score = torch.tensor(em_score, dtype=torch.float32)
subset_match_score = torch.tensor(subset_match_score, dtype=torch.float32)
base_metrics.update(em_score=em_score, subset_match_score=subset_match_score)
# rouge_results = self.rouge_metric.compute()
# rouge_dict = self.parse_score(rouge_results)
return base_metrics
def training_step(self, batch, batch_idx):
loss = self._step(batch)
tensorboard_logs = {'train_loss': loss}
return {'loss': loss, 'log': tensorboard_logs}
def training_epoch_end(self, outputs):
avg_train_loss = torch.stack([x['loss'] for x in outputs]).mean()
tensorboard_logs = {'avg_train_loss': avg_train_loss}
# return {'avg_train_loss': avg_train_loss, 'log': tensorboard_logs, 'progress_bar': tensorboard_logs}
def validation_step(self, batch, batch_idx):
return self._generative_step(batch)
def validation_epoch_end(self, outputs):
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
tensorboard_logs = {'val_loss': avg_loss}
if len(self.em_score_list) <= 2:
average_em_score = sum(self.em_score_list) / len(self.em_score_list)
average_subset_match_score = sum(self.subset_score_list) / len(self.subset_score_list)
else:
latest_em_score = self.em_score_list[:-2]
latest_subset_score = self.subset_score_list[:-2]
average_em_score = sum(latest_em_score) / len(latest_em_score)
average_subset_match_score = sum(latest_subset_score) / len(latest_subset_score)
average_em_score = torch.tensor(average_em_score, dtype=torch.float32)
average_subset_match_score = torch.tensor(average_subset_match_score, dtype=torch.float32)
tensorboard_logs.update(em_score=average_em_score, subset_match_score=average_subset_match_score)
self.target_gen = []
self.prediction_gen = []
return {
'avg_val_loss': avg_loss,
'em_score': average_em_score,
'subset_match_socre': average_subset_match_score,
'log': tensorboard_logs,
'progress_bar': tensorboard_logs
}
def configure_optimizers(self):
model = self.model
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = [
{
"params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)],
"weight_decay": self.hyparams.weight_decay,
},
{
"params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)],
"weight_decay": 0.0,
},
]
optimizer = Adafactor(optimizer_grouped_parameters, lr=self.hyparams.learning_rate, scale_parameter=False,
relative_step=False)
self.opt = optimizer
return [optimizer]
def optimizer_step(self, epoch, batch_idx, optimizer, optimizer_idx, optimizer_closure=None,
on_tpu=False, using_native_amp=False, using_lbfgs=False):
optimizer.step(closure=optimizer_closure)
optimizer.zero_grad()
self.lr_scheduler.step()
def get_tqdm_dict(self):
tqdm_dict = {"loss": "{:.3f}".format(self.trainer.avg_loss), "lr": self.lr_scheduler.get_last_lr()[-1]}
return tqdm_dict
def train_dataloader(self):
n_samples = self.n_obs['train']
train_dataset = get_dataset(tokenizer=self.tokenizer, data=self.train_data, num_samples=n_samples,
args=self.hyparams)
sampler = RandomSampler(train_dataset)
dataloader = DataLoader(train_dataset, sampler=sampler, batch_size=self.hyparams.train_batch_size,
drop_last=True, num_workers=4)
# t_total = (
# (len(dataloader.dataset) // (self.hyparams.train_batch_size * max(1, self.hyparams.n_gpu)))
# // self.hyparams.gradient_accumulation_steps
# * float(self.hyparams.num_train_epochs)
# )
t_total = 100000
scheduler = get_linear_schedule_with_warmup(
self.opt, num_warmup_steps=self.hyparams.warmup_steps, num_training_steps=t_total
)
self.lr_scheduler = scheduler
return dataloader
def val_dataloader(self):
n_samples = self.n_obs['validation']
validation_dataset = get_dataset(tokenizer=self.tokenizer, data=self.val_data, num_samples=n_samples,
args=self.hyparams)
sampler = RandomSampler(validation_dataset)
return DataLoader(validation_dataset, shuffle=False, batch_size=self.hyparams.eval_batch_size, sampler=sampler, num_workers=4)
def test_dataloader(self):
n_samples = self.n_obs['test']
test_dataset = get_dataset(tokenizer=self.tokenizer, data=self.test_data, num_samples=n_samples, args=self.hyparams)
return DataLoader(test_dataset, batch_size=self.hyparams.eval_batch_size, num_workers=4)
def on_save_checkpoint(self, checkpoint):
save_path = self.output_dir.joinpath("best_tfmr")
self.model.config.save_step = self.step_count
self.model.save_pretrained(save_path)
self.tokenizer.save_pretrained(save_path)
import os
import argparse
import pytorch_lightning as pl
from question_answering.t5_closed_book import T5FineTuner
if __name__ == '__main__':
args_dict = dict(
output_dir="", # path to save the checkpoints
model_name_or_path='t5-large',
tokenizer_name_or_path='t5-large',
max_input_length=128,
max_output_length=128,
freeze_encoder=False,
freeze_embeds=False,
learning_rate=1e-5,
weight_decay=0.0,
adam_epsilon=1e-8,
warmup_steps=0,
train_batch_size=4,
eval_batch_size=4,
num_train_epochs=2,
gradient_accumulation_steps=10,
n_gpu=1,
resume_from_checkpoint=None,
val_check_interval=0.5,
n_val=4000,
n_train=-1,
n_test=-1,
early_stop_callback=False,
fp_16=False,
opt_level='O1',
max_grad_norm=1.0,
seed=101,
)
args_dict.update({'output_dir': 't5_large_MedQuAD_256', 'num_train_epochs': 100,
'train_batch_size': 16, 'eval_batch_size': 16, 'learning_rate': 1e-3})
args = argparse.Namespace(**args_dict)
checkpoint_callback = pl.callbacks.ModelCheckpoint(dirpath=args.output_dir, monitor="em_score", mode="max", save_top_k=1)
## If resuming from checkpoint, add an arg resume_from_checkpoint
train_params = dict(
accumulate_grad_batches=args.gradient_accumulation_steps,
gpus=args.n_gpu,
max_epochs=args.num_train_epochs,
# early_stop_callback=False,
precision=16 if args.fp_16 else 32,
# amp_level=args.opt_level,
# resume_from_checkpoint=args.resume_from_checkpoint,
gradient_clip_val=args.max_grad_norm,
checkpoint_callback=checkpoint_callback,
val_check_interval=args.val_check_interval,
# accelerator='dp'
# logger=wandb_logger,
# callbacks=[LoggingCallback()],
)
model = T5FineTuner(args)
trainer = pl.Trainer(**train_params)
trainer.fit(model)
`
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Emotion dataset cannot be downloaded
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"Hi @cbarond there's already an open issue at https://github.com/dair-ai/emotion_dataset/issues/5, as the data seems to be missing now, so check that issue instead 👍🏻 ",
"Thanks @cbarond for reporting and @alvarobartt for pointing to the issue we opened in the author's repo.\r\n\r\nIndeed, this issue was first raised in the \"emotion\" dataset Community tab: https://huggingface.co/datasets/emotion/discussions/3\r\n\r\nI'm closing this issue and leave the issue above for the subsequent updates.\r\n\r\nDuplicate of: https://huggingface.co/datasets/emotion/discussions/3",
"try using \"SetFit/emotion\" instead",
"> try using \"SetFit/emotion\" instead\r\n\r\nI' replaced \"emotion\" with \"SetFit/Emotion\", but the code is getting stuck at\r\n\r\n`emotions = load_dataset(\"SetFit/emotion\")`\r\n\r\nI pause execution using the debugger, and it takes me to filelock.py:226\r\n\r\n`with self._thread_lock:`\r\n\r\nDo you know a way to get past this issue?",
"thanks @honeyimholm - worked for me",
"> try using \"SetFit/emotion\" instead\r\n\r\nIt really helps a lot, thank you!",
"The dataset loading script has been fixed: https://huggingface.co/datasets/emotion/discussions/4"
] | 2022-12-08T19:07:09
| 2023-02-23T19:13:19
| 2022-12-09T10:46:11
|
NONE
| null | null | null | null |
### Describe the bug
The emotion dataset gives a FileNotFoundError. The full error is: `FileNotFoundError: Couldn't find file at https://www.dropbox.com/s/1pzkadrvffbqw6o/train.txt?dl=1`.
It was working yesterday (December 7, 2022), but stopped working today (December 8, 2022).
### Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("emotion")
```
### Expected behavior
The dataset should load properly.
### Environment info
- `datasets` version: 2.7.1
- Platform: Windows-10-10.0.19045-SP0
- Python version: 3.9.13
- PyArrow version: 10.0.1
- Pandas version: 1.5.1
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I_kwDODunzps5YX2KH
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|
`map()` stops every 1000 steps
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"Hi !\r\n\r\n> It starts using all the cores (I am not sure why because I did not pass num_proc)\r\n\r\nThe tokenizer uses Rust code that is multithreaded. And maybe the `feature_extractor` might run some things in parallel as well - but I'm not super familiar with its internals.\r\n\r\n> then progress bar stops at every 1k steps. (starts using a single core)\r\n\r\nEvery 1000 examples we flush the processed examples to disk. It is this way because Arrow is a columnar format: you must write data chunk by chunk. The processing in on hold while writing right now - maybe this can be improved in the future.",
"Hi @lhoestq \r\nThanks for the explanation! it was so helpful! Let me check why `feature_extractor` is running on multiple cpus.",
"Hey @lhoestq, any news about this flush operation ? This really really slow down most of my .map and .filter operation. I'm sometime taking 10x more time waiting for the flush than actually processing the 1k items. My current workarround is to set `writer_batch_size=len(dataset)`."
] | 2022-12-07T19:09:40
| 2025-02-14T18:10:07
| 2022-12-10T00:39:28
|
NONE
| null | null | null | null |
### Describe the bug
I am passing the following `prepare_dataset` function to `Dataset.map` (code is inspired from [here](https://github.com/huggingface/community-events/blob/main/whisper-fine-tuning-event/run_speech_recognition_seq2seq_streaming.py#L454))
```python3
def prepare_dataset(batch):
# load and resample audio data from 48 to 16kHz
audio = batch["audio"]
# compute log-Mel input features from input audio array
batch["input_features"] = feature_extractor(audio["array"], sampling_rate=audio["sampling_rate"]).input_features[0]
# encode target text to label ids
batch["labels"] = tokenizer(batch[text_column]).input_ids
return batch
...
train_ds = train_ds.map(prepare_dataset)
```
Here is the exact code I am running https://github.com/bayartsogt-ya/whisper-multiple-hf-datasets/blob/main/train.py#L70-L71
It starts using all the cores (I am not sure why because I did not pass `num_proc`)
then progress bar stops at every 1k steps. (starts using a single core)
then come back to using all the cores again.
link to [screen record](https://youtu.be/jPQpQQGp6Gc)
Can someone explain this process and maybe provide a way to improve this pipeline? cc: @lhoestq
### Steps to reproduce the bug
1. load the dataset
2. create a Whisper processor
3. create a `prepare_dataset` function
4. pass the function to `dataset.map(prepare_dataset)`
### Expected behavior
- Use a single core per a function
- not to stop at some point?
### Environment info
- `datasets` version: 2.7.1.dev0
- Platform: Linux-5.4.0-109-generic-x86_64-with-glibc2.27
- Python version: 3.8.10
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
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I_kwDODunzps5YUNP8
| 5,337
|
Support webdataset format
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[
"I like the idea of having `webdataset` as an optional dependency to ensure our loader generates web datasets the same way as the main project.",
"Webdataset is the one of the most popular dataset formats for large scale computer vision tasks. Upvote for this issue. ",
"Any updates on this?",
"We haven't had the bandwidth to implement it so far, but if someone wants to give it a shot please don't hesitate ^^",
"Done in #6391 "
] | 2022-12-07T11:32:25
| 2024-03-06T14:39:29
| 2024-03-06T14:39:28
|
MEMBER
| null | null | null | null |
Webdataset is an efficient format for iterable datasets. It would be nice to support it in `datasets`, as discussed in https://github.com/rom1504/img2dataset/issues/234.
In particular it would be awesome to be able to load one using `load_dataset` in streaming mode (either from a local directory, or from a dataset on the Hugging Face Hub). Some datasets on the Hub are already in webdataset format.
It terms of implementation, we can have something similar to the Parquet loader.
I also think it's fine to have webdataset as an optional dependency.
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Passing numpy array to ClassLabel names causes ValueError
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[
"Should `datasets` allow `ClassLabel` input parameter to be an `np.array` even though internally we need to cast it to a Python list? @lhoestq @mariosasko ",
"Hi! No, I don't think so. The `names` parameter is [annotated](https://github.com/huggingface/datasets/blob/582236640b9109988e5f7a16a8353696ffa09a16/src/datasets/features/features.py#L892) as `List[str]` (**NumPy arrays are not lists**), and considering that type checking is not a common practice in Python, I think we can leave the code as-is.",
"I appreciate it is the wrong type, and that type checking is not common, but I think there's a few circumstances that make it a good idea from a usability perspective.\r\n\r\nIt's quite a difficult error to debug because it comes from a utility function (so it's not immediately obvious which parameter caused it). What makes it even more difficult is the exception happens when the features instance is used to instantiate the dataset, **not** when when the wrong type is actually passed when the features is instantiated. When I was debugging the error, I didn't really consider it could be an issue with the features instance because it had instantiated fine. It's also not one of the more common exceptions caused by trying to use a non-list as a list.\r\n\r\nIt's also relatively easy to accidentally get a numpy array of class types (e.g. calling `unique()` on a pandas dataframe column). Additionally, passing in a `set` instead of the list (again, relatively easy because people may run `set(classes)` to generate uniques) causes an error when the features instance is used, albeit a slightly more obvious one.\r\n\r\nThe names list is already being processed and validated in the `__post_init__` method anyway, so it would not really be adding any complexity to check it is actually a list here too. I'm happy to contribute this change if you change your mind about whether it's worthwhile.",
"I agree that it's not easy to debug this issue, so perhaps we could add some basic type checking (e.g. `not isinstance(names, list)` -> error) to make debugging easier. Feel free to submit a PR.\r\n\r\n> Additionally, passing in a set instead of the list (again, relatively easy because people may run set(classes) to generate uniques) causes an error when the features instance is used, albeit a slightly more obvious one.\r\n\r\n`set` is an unordered structure (it's ordered in Python 3.6+, but this is CPython's implementation detail), and the order of ClassLabel `names` matters, so this doesn't require a fix.",
"What about checking for `Sequence` instead? I think users can pass a list or a tuple as well."
] | 2022-12-05T12:59:03
| 2022-12-22T16:32:50
| 2022-12-22T16:32:50
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
If a numpy array is passed to the names argument of ClassLabel, creating a dataset with those features causes an error.
### Steps to reproduce the bug
https://colab.research.google.com/drive/1cV_es1PWZiEuus17n-2C-w0KEoEZ68IX
TLDR:
If I define my classes as:
```
my_classes = np.array(['one', 'two', 'three'])
```
Then this errors:
```py
features = Features({'value': Value('string'), 'label': ClassLabel(names=my_classes)})
dataset = Dataset.from_list(my_data, features=features)
```
```
ValueError Traceback (most recent call last)
[<ipython-input-8-a8a9d53ec82f>](https://localhost:8080/#) in <module>
----> 1 dataset = Dataset.from_list(my_data, features=features)
11 frames
[/usr/local/lib/python3.8/dist-packages/datasets/utils/py_utils.py](https://localhost:8080/#) in _asdict_inner(obj)
183 for f in fields(obj):
184 value = _asdict_inner(getattr(obj, f.name))
--> 185 if not f.init or value != f.default or f.metadata.get("include_in_asdict_even_if_is_default", False):
186 result[f.name] = value
187 return result
ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()
```
But this works:
```
features2 = Features({'value': Value('string'), 'label': ClassLabel(names=list(my_classes))})
dataset2 = Dataset.from_list(my_data, features=features2)
```
### Expected behavior
If I provide a numpy array of class names, I would expect either an error that the names list is the wrong type, or for it to be cast internally.
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-5.15.0-56-generic-x86_64-with-glibc2.10
- Python version: 3.8.15
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
Additionally:
- Numpy version: 1.23.5
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No documentation for main branch is built
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[] | 2022-12-01T16:50:58
| 2022-12-02T16:26:01
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|
MEMBER
| null | null | null | null |
Since:
- #5250
- Commit: 703b84311f4ead83c7f79639f2dfa739295f0be6
the docs for main branch are no longer built.
The change introduced only triggers the docs building for releases.
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I_kwDODunzps5Xtd62
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map(...batch_size=None) for IterableDataset
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[
"Hi! I agree it makes sense for `IterableDataset.map` to support the `batch_size=None` case. This should be super easy to fix.",
"@mariosasko as this is something simple maybe I can include it as part of https://github.com/huggingface/datasets/pull/5311? Let me know :+1:",
"#self-assign",
"Feel free to close this @lhoestq as part of https://github.com/huggingface/datasets/pull/5336 :hugs:",
"Thanks again :)\r\n\r\n> For practical usages, an alternative to this would be to convert from an iterable dataset to a map-style dataset, but it is not obvious how to do this.\r\n\r\nThis is interesting as well, if anyone wants to explore"
] | 2022-12-01T15:43:42
| 2022-12-07T15:54:43
| 2022-12-07T15:54:42
|
CONTRIBUTOR
| null | null | null | null |
### Feature request
Dataset.map(...) allows batch_size to be None. It would be nice if IterableDataset did too.
### Motivation
Although it may seem a bit of a spurious request given that `IterableDataset` is meant for larger than memory datasets, but there are a couple of reasons why this might be nice.
One is that load_dataset(...) can return either IterableDataset or Dataset. mypy will then complain if batch_size=None even if we know it is Dataset. Of course we can do:
assert isinstance(d, datasets.DatasetDict)
But it is a mild inconvenience. What's more annoying is that whenever we use something like e.g. `combine_datasets(...)`, we end up with the union again, and so have to do the assert again.
Another is that we could actually end up with an IterableDataset small enough for memory in normal/correct usage, e.g. by filtering a massive IterableDataset.
For practical usages, an alternative to this would be to convert from an iterable dataset to a map-style dataset, but it is not obvious how to do this.
### Your contribution
Not this time.
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Fix docstrings and types in documentation that appears on the website
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"I agree we have a mess with docstrings...",
"Ok, I believe we've cleaned up most of the old syntax we were using for the user-facing docs! There are still a couple of `:obj:`'s and `:class:` floating around in the docstrings we don't expose that I'll track down :)",
"Hi @polinaeterna @albertvillanova @stevhliu, I hope you all are doing well.\r\n\r\nIs this issue still unresolved as I am interested in it?",
"It should be mostly fixed for the user-facing APIs, but there may be some Sphinx syntax still lurking around in the non-public APIs. Feel free to open a PR to fix those if you catch any! 🤗 ",
"Thanks for your reply @stevhliu :)\r\nSure, I will try to find out the remaining and fix that.\r\n\r\n"
] | 2022-12-01T15:34:53
| 2024-01-23T16:21:54
| null |
CONTRIBUTOR
| null | null | null | null |
While I was working on https://github.com/huggingface/datasets/pull/5313 I've noticed that we have a mess in how we annotate types and format args and return values in the code. And some of it is displayed in the [Reference section](https://huggingface.co/docs/datasets/package_reference/builder_classes) of the documentation on the website.
Would be nice someday, maybe before releasing datasets 3.0.0, to unify it......
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Duplicated Keys in Taskmaster-2 Dataset
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[
"Thanks for reporting, @liaeh.\r\n\r\nWe are having a look at it. ",
"I have transferred the discussion to the Community tab of the dataset: https://huggingface.co/datasets/taskmaster2/discussions/1"
] | 2022-12-01T15:31:06
| 2022-12-01T16:26:06
| 2022-12-01T16:26:06
|
NONE
| null | null | null | null |
### Describe the bug
Loading certain splits () of the taskmaster-2 dataset fails because of a DuplicatedKeysError. This occurs for the following domains: `'hotels', 'movies', 'music', 'sports'`. The domains `'flights', 'food-ordering', 'restaurant-search'` load fine.
Output:
### Steps to reproduce the bug
```
from datasets import load_dataset
dataset = load_dataset("taskmaster2", "music")
```
Output:
```
---------------------------------------------------------------------------
DuplicatedKeysError Traceback (most recent call last)
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:1532, in GeneratorBasedBuilder._prepare_split_single(self, arg)
[1531](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1530) example = self.info.features.encode_example(record) if self.info.features is not None else record
-> [1532](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1531) writer.write(example, key)
[1533](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1532) num_examples_progress_update += 1
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py:475, in ArrowWriter.write(self, example, key, writer_batch_size)
[474](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=473) if self._check_duplicates:
--> [475](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=474) self.check_duplicate_keys()
[476](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=475) # Re-intializing to empty list for next batch
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py:492, in ArrowWriter.check_duplicate_keys(self)
[486](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=485) duplicate_key_indices = [
[487](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=486) str(self._num_examples + index)
[488](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=487) for index, (duplicate_hash, _) in enumerate(self.hkey_record)
[489](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=488) if duplicate_hash == hash
[490](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=489) ]
--> [492](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=491) raise DuplicatedKeysError(key, duplicate_key_indices)
[493](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=492) else:
DuplicatedKeysError: Found multiple examples generated with the same key
The examples at index 858, 859 have the key dlg-89174425-d57a-4db7-a92b-165c3bff6735
During handling of the above exception, another exception occurred:
DuplicatedKeysError Traceback (most recent call last)
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:1541, in GeneratorBasedBuilder._prepare_split_single(self, arg)
[1540](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1539) num_shards = shard_id + 1
-> [1541](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1540) num_examples, num_bytes = writer.finalize()
[1542](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1541) writer.close()
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py:563, in ArrowWriter.finalize(self, close_stream)
[562](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=561) if self._check_duplicates:
--> [563](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=562) self.check_duplicate_keys()
[564](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=563) # Re-intializing to empty list for next batch
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py:492, in ArrowWriter.check_duplicate_keys(self)
[486](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=485) duplicate_key_indices = [
[487](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=486) str(self._num_examples + index)
[488](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=487) for index, (duplicate_hash, _) in enumerate(self.hkey_record)
[489](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=488) if duplicate_hash == hash
[490](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=489) ]
--> [492](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=491) raise DuplicatedKeysError(key, duplicate_key_indices)
[493](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/arrow_writer.py?line=492) else:
DuplicatedKeysError: Found multiple examples generated with the same key
The examples at index 858, 859 have the key dlg-89174425-d57a-4db7-a92b-165c3bff6735
The above exception was the direct cause of the following exception:
DatasetGenerationError Traceback (most recent call last)
Cell In[23], line 1
----> 1 dataset = load_dataset("taskmaster2", "music")
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py:1741, in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, num_proc, **config_kwargs)
[1738](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1737) try_from_hf_gcs = path not in _PACKAGED_DATASETS_MODULES
[1740](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1739) # Download and prepare data
-> [1741](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1740) builder_instance.download_and_prepare(
[1742](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1741) download_config=download_config,
[1743](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1742) download_mode=download_mode,
[1744](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1743) ignore_verifications=ignore_verifications,
[1745](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1744) try_from_hf_gcs=try_from_hf_gcs,
[1746](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1745) use_auth_token=use_auth_token,
[1747](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1746) num_proc=num_proc,
[1748](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1747) )
[1750](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1749) # Build dataset for splits
[1751](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1750) keep_in_memory = (
[1752](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1751) keep_in_memory if keep_in_memory is not None else is_small_dataset(builder_instance.info.dataset_size)
[1753](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/load.py?line=1752) )
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:822, in DatasetBuilder.download_and_prepare(self, output_dir, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, file_format, max_shard_size, num_proc, storage_options, **download_and_prepare_kwargs)
[820](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=819) if num_proc is not None:
[821](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=820) prepare_split_kwargs["num_proc"] = num_proc
--> [822](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=821) self._download_and_prepare(
[823](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=822) dl_manager=dl_manager,
[824](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=823) verify_infos=verify_infos,
[825](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=824) **prepare_split_kwargs,
[826](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=825) **download_and_prepare_kwargs,
[827](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=826) )
[828](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=827) # Sync info
[829](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=828) self.info.dataset_size = sum(split.num_bytes for split in self.info.splits.values())
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:1555, in GeneratorBasedBuilder._download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs)
[1554](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1553) def _download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs):
-> [1555](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1554) super()._download_and_prepare(
[1556](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1555) dl_manager, verify_infos, check_duplicate_keys=verify_infos, **prepare_splits_kwargs
[1557](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1556) )
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:913, in DatasetBuilder._download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
[909](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=908) split_dict.add(split_generator.split_info)
[911](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=910) try:
[912](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=911) # Prepare split will record examples associated to the split
--> [913](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=912) self._prepare_split(split_generator, **prepare_split_kwargs)
[914](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=913) except OSError as e:
[915](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=914) raise OSError(
[916](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=915) "Cannot find data file. "
[917](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=916) + (self.manual_download_instructions or "")
[918](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=917) + "\nOriginal error:\n"
[919](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=918) + str(e)
[920](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=919) ) from None
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:1396, in GeneratorBasedBuilder._prepare_split(self, split_generator, check_duplicate_keys, file_format, num_proc, max_shard_size)
[1394](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1393) gen_kwargs = split_generator.gen_kwargs
[1395](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1394) job_id = 0
-> [1396](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1395) for job_id, done, content in self._prepare_split_single(
[1397](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1396) {"gen_kwargs": gen_kwargs, "job_id": job_id, **_prepare_split_args}
[1398](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1397) ):
[1399](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1398) if done:
[1400](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1399) result = content
File ~/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py:1550, in GeneratorBasedBuilder._prepare_split_single(self, arg)
[1548](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1547) if isinstance(e, SchemaInferenceError) and e.__context__ is not None:
[1549](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1548) e = e.__context__
-> [1550](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1549) raise DatasetGenerationError("An error occurred while generating the dataset") from e
[1552](file:///home/user/repos/tts-dataset/tts-dataset/venv/lib/python3.9/site-packages/datasets/builder.py?line=1551) yield job_id, True, (total_num_examples, total_num_bytes, writer._features, num_shards, shard_lengths)
DatasetGenerationError: An error occurred while generating the dataset
```
### Expected behavior
Loads the dataset
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-5.13.0-40-generic-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 10.0.1
- Pandas version: 1.5.2
|
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`ImageFolder` performs poorly with large datasets
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"Hi ! ImageFolder is made for small scale datasets indeed. For large scale image datasets you better group your images in TAR archives or Arrow/Parquet files. This is true not just for ImageFolder loading performance, but also because having millions of files is not ideal for your filesystem or when moving the data around.\r\n\r\nOption 1. use TAR archives\r\n\r\nI'd suggest you to take a look at how we load [Imagenet](https://huggingface.co/datasets/imagenet-1k/tree/main) for example. The dataset is sharded in multiple TAR archives and there is a [script](https://huggingface.co/datasets/imagenet-1k/blob/main/imagenet-1k.py) that iterates over the archives to load the images.\r\n\r\nOption 2. use Arrow/Parquet\r\n\r\nYou can load your images as an Arrow Dataset with\r\n```python\r\nfrom datasets import Dataset, Image, load_from_disk, load_dataset\r\n\r\nds = Dataset.from_dict({\"image\": list(glob.glob(\"path/to/dir/**/*.jpg\"))})\r\n\r\ndef add_metadata(example):\r\n ...\r\n\r\nds = ds.map(add_metadata, num_proc=16) # num_proc for multiprocessing\r\nds = ds.cast_column(\"image\", Image())\r\n\r\n# save as Arrow locally\r\nds.save_to_disk(\"output_dir\")\r\nreloaded = load_from_disk(\"output_dir\")\r\n\r\n# OR save as Parquet on the HF Hub\r\nds.push_to_hub(\"username/dataset_name\")\r\nreloaded = load_dataset(\"username/dataset_name\")\r\n# reloaded = load_dataset(\"username/dataset_name\", num_proc=16) # to use multiprocessing\r\n```\r\n\r\nPS: maybe we can actually have something similar to ImageFolder but for image archives at one point ?",
"@lhoestq Thanks!\r\n\r\nPerhaps it'd be worth adding a note on the documentation that `ImageFolder` is not intended for large datasets? This limitation is not intuitively obvious to someone who has not used it before, I think.",
"Thanks for the feedback @salieri! I opened #5329 to make it clear `ImageFolder` is not intended for large datasets. Please feel free to comment if you have any other feedback! 🙂 "
] | 2022-12-01T00:04:21
| 2022-12-01T21:49:26
| null |
NONE
| null | null | null | null |
### Describe the bug
While testing image dataset creation, I'm seeing significant performance bottlenecks with imagefolders when scanning a directory structure with large number of images.
## Setup
* Nested directories (5 levels deep)
* 3M+ images
* 1 `metadata.jsonl` file
## Performance Degradation Point 1
Degradation occurs because [`get_data_files_patterns`](https://github.com/huggingface/datasets/blob/main/src/datasets/data_files.py#L231-L243) runs the exact same scan for many different types of patterns, and there doesn't seem to be a way to easily limit this. It's controlled by the definition of [`ALL_DEFAULT_PATTERNS`](https://github.com/huggingface/datasets/blob/main/src/datasets/data_files.py#L82-L85).
One scan with 3M+ files takes about 10-15 minutes to complete on my setup, so having those extra scans really slows things down – from 10 minutes to 60+. Most of the scans return no matches, but they still take a significant amount of time to complete – hence the poor performance.
As a side effect, when this scan is run on 3M+ image files, Python also consumes up to 12 GB of RAM, which is not ideal.
## Performance Degradation Point 2
The second performance bottleneck is in [`PackagedDatasetModuleFactory.get_module`](https://github.com/huggingface/datasets/blob/d7dfbc83d68e87ba002c5eb2555f7a932e59038a/src/datasets/load.py#L707-L711), which calls `DataFilesDict.from_local_or_remote`.
It runs for a long time (60min+), consuming significant amounts of RAM – even more than the point 1 above. Based on `iostat -d 2`, it performs **zero** disk operations, which to me suggests that there is a code based bottleneck there that could be sorted out.
### Steps to reproduce the bug
```python
from datasets import load_dataset
import os
import huggingface_hub
dataset = load_dataset(
'imagefolder',
data_dir='/some/path',
# just to spell it out:
split=None,
drop_labels=True,
keep_in_memory=False
)
dataset.push_to_hub('account/dataset', private=True)
```
### Expected behavior
While it's certainly possible to write a custom loader to replace `ImageFolder` with, it'd be great if the off-the-shelf `ImageFolder` would by default have a setup that can scale to large datasets.
Or perhaps there could be a dedicated loader just for large datasets that trades off flexibility for performance? As in, maybe you have to define explicitly how you want it to work rather than it trying to guess your data structure like `_get_data_files_patterns()` does?
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-4.14.296-222.539.amzn2.x86_64-x86_64-with-glibc2.2.5
- Python version: 3.7.10
- PyArrow version: 10.0.1
- Pandas version: 1.3.5
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I_kwDODunzps5XoC9h
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Bug in sample_by="paragraph"
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[
"Thanks for reporting, @adampauls.\r\n\r\nWe are having a look at it. "
] | 2022-11-30T19:24:13
| 2022-12-01T15:19:02
| 2022-12-01T15:19:02
|
NONE
| null | null | null | null |
### Describe the bug
I think [this line](https://github.com/huggingface/datasets/blob/main/src/datasets/packaged_modules/text/text.py#L96) is wrong and should be `batch = f.read(self.config.chunksize)`. Otherwise it will never terminate because even when `f` is finished reading, `batch` will still be truthy from the last iteration.
### Steps to reproduce the bug
```
> cat test.txt
a b c
d e f
````
```python
>>> import datasets
>>> datasets.load_dataset("text", data_files={"train":"test.txt"}, sample_by="paragraph")
```
This will go on forever.
### Expected behavior
Terminates very quickly.
### Environment info
`version = "2.6.1"` but I think the bug is still there on main.
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Adding new splits to a dataset script with existing old splits info in metadata's `dataset_info` fails
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[
"EDIT:\r\nI think in this case, the metadata files (either README or JSON) should not be read (i.e. `self.info.splits` should be None).\r\n\r\nOne idea: \r\n- I think ideally we should set this behavior when we pass `--save_info` to the CLI `test`\r\n- However, currently, the builder is unaware of this: `save_info` arg is not passed to it",
"> I think in this case\r\n\r\n@albertvillanova You mean in cases when the script was changed? \r\n\r\nI suggest that we:\r\n* add a check on the slice (like 'split_name[n%]) kind of format here: https://github.com/huggingface/datasets/blob/main/src/datasets/splits.py#L523 to catch things like this. \r\n* Error here happens before splits verification, but in `_prepare_split`, and `_prepare_split` doesn't perform any verification and don't know about it. so we can pass this parameter and take splits from `split_generator`, not from `split.info` in case when `verify_infos` is False\r\n* we can check if split **names** from split_generators and self.info.splits are the same **before** preparing splits (if `verify_info=True`) so that we don't spend time on generating unwanted data. \r\n* provide some user-friendly warnings about `ignore_verifications` parameter so that users know that if something is not matching they can ignore it\r\n\r\nI started it here: https://github.com/huggingface/datasets/pull/5327/files\r\n\r\nWhat do you think @albertvillanova ?",
"I edited my previous comment:\r\n- First I proposed setting `self.info.splits` to None when `ignore_verifications=True`\r\n - I thought it was the easiest implementation because `ignore_verifications` is passed to `DatasetBuilder.download_and_prepare`\r\n - However, afterwards, I realized this might not be a good idea for this use case:\r\n - A user wants to optimize the loading of the dataset, and passes `ignore_verifications=False` to avoid all the verifications\r\n - In this case, we want `self.info.splits` to be read from metadata file\r\n- Then, I thought that it might be better to set `self.info.splits` to None when we pass `--save_info` to the CLI test: if we are going to save the info to the metadata file, it makes no sense to read the info from the metadata file\r\n - This implementation is not so easy because the Builder knows nothing about `--save_info`\r\n\r\nI agree with you there are 2 things to be addressed here:\r\n- One is what I have just commented: `self.info.splits` should be None in this case\r\n- The other, a validation should be implemented when calling `make_file_instructions` and/or `SplitDict.__getitem__`, so that when passing \"training\" to it, we get a more descriptive error other than `TypeError: expected str, bytes or os.PathLike object, not NoneType` "
] | 2022-11-30T18:02:15
| 2022-12-02T07:02:53
| null |
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
If you first create a custom dataset with a specific set of splits, generate metadata with `datasets-cli test ... --save_info`, then change your script to include more splits, it fails.
That's what happened in https://huggingface.co/datasets/mrdbourke/food_vision_199_classes/discussions/2#6385fd1269634850f8ddff48.
### Steps to reproduce the bug
1. create a dataset with a custom split that returns, for example, only `"train"` split in `_splits_generators'`. specifically, if really want to reproduce, copy `https://huggingface.co/datasets/mrdbourke/food_vision_199_classes/blob/main/food_vision_199_classes.py
2. run `datasets-cli test dataset_script.py --save_info --all_configs` - this would generate metadata yaml in `README.md` that would contain info about splits, for example, like this:
```
splits:
- name: train
num_bytes: 2973286
num_examples: 19747
```
3. make changes to your script so that it returns another set of splits, for example, `"train"` and `"test"` (uncomment [these lines](https://huggingface.co/datasets/mrdbourke/food_vision_199_classes/blob/main/food_vision_199_classes.py#L271))
4. run `load_dataset` and get the following error:
```python
Traceback (most recent call last):
File "/home/daniel/code/pytorch/env/bin/datasets-cli", line 8, in <module>
sys.exit(main())
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/commands/datasets_cli.py", line 39, in main
service.run()
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/commands/test.py", line 141, in run
builder.download_and_prepare(
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/builder.py", line 822, in download_and_prepare
self._download_and_prepare(
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/builder.py", line 1555, in _download_and_prepare
super()._download_and_prepare(
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/builder.py", line 913, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/builder.py", line 1356, in _prepare_split
split_info = self.info.splits[split_generator.name]
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/splits.py", line 525, in __getitem__
instructions = make_file_instructions(
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/arrow_reader.py", line 111, in make_file_instructions
name2filenames = {
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/arrow_reader.py", line 112, in <dictcomp>
info.name: filenames_for_dataset_split(
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/naming.py", line 78, in filenames_for_dataset_split
prefix = filename_prefix_for_split(dataset_name, split)
File "/home/daniel/code/pytorch/env/lib/python3.8/site-packages/datasets/naming.py", line 57, in filename_prefix_for_split
if os.path.basename(name) != name:
File "/home/daniel/code/pytorch/env/lib/python3.8/posixpath.py", line 143, in basename
p = os.fspath(p)
TypeError: expected str, bytes or os.PathLike object, not NoneType
```
5. bonus: try to regenerate metadata in `README.md` with `datasets-cli` as in step 2 and get the same error.
This is because `dataset.info.splits` contains only `"train"` split so when we are doing `self.info.splits[split_generator.name]` it tries to infer smth like `info.splits['train[50%]']` and that's not the case and it fails.
### Expected behavior
to be discussed?
This can be solved by removing splits information from metadata file first. But I wonder if there is a better way.
### Environment info
- Datasets version: 2.7.1
- Python version: 3.8.13
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I_kwDODunzps5XmZ1-
| 5,314
|
Datasets: classification_report() got an unexpected keyword argument 'suffix'
|
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[
"This seems similar to https://github.com/huggingface/datasets/issues/2512 Can you try to update seqeval ? ",
"@JonathanAlis also note that the metrics are deprecated in our `datasets` library.\r\n\r\nPlease, use the new library 🤗 Evaluate instead: https://huggingface.co/docs/evaluate"
] | 2022-11-30T14:01:03
| 2023-07-21T14:40:31
| 2023-07-21T14:40:31
|
NONE
| null | null | null | null |
https://github.com/huggingface/datasets/blob/main/metrics/seqeval/seqeval.py
> import datasets
predictions = [['O', 'O', 'B-MISC', 'I-MISC', 'I-MISC', 'I-MISC', 'O'], ['B-PER', 'I-PER', 'O']]
references = [['O', 'O', 'O', 'B-MISC', 'I-MISC', 'I-MISC', 'O'], ['B-PER', 'I-PER', 'O']]
seqeval = datasets.load_metric("seqeval")
results = seqeval.compute(predictions=predictions, references=references)
print(list(results.keys()))
print(results["overall_f1"])
print(results["PER"]["f1"])
It raises the error:
> TypeError: classification_report() got an unexpected keyword argument 'suffix'
For context, versions on my pip list -v
> datasets 1.12.1
seqeval 1.2.2
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I_kwDODunzps5XYOf_
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|
Can't use custom feature description when loading a dataset
|
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[
"Forgot to actually convert the feature dict to a Feature object. Closing."
] | 2022-11-28T07:55:44
| 2022-11-28T08:11:45
| 2022-11-28T08:11:44
|
MEMBER
| null | null | null | null |
### Describe the bug
I have created a feature dictionary to describe my datasets' column types, to use when loading the dataset, following [the doc](https://huggingface.co/docs/datasets/main/en/about_dataset_features). It crashes at dataset load.
### Steps to reproduce the bug
```python
# Creating features
task_list = [f"motif_G{i}" for i in range(19, 53)]
features = {t: Sequence(feature=Value(dtype="float64")) for t in task_list}
for col_name in ["class_label"]:
features[col_name] = Sequence(feature=Value(dtype="int64"))
for col_name in ["num_nodes"]:
features[col_name] = Value(dtype="int64")
for col_name in ["num_bridges", "num_cycles", "avg_shortest_path_len"]:
features[col_name] = Sequence(feature=Value(dtype="float64"))
for col_name in ["edge_attr", "node_feat", "edge_index"]:
features[col_name] = Sequence(feature=Sequence(feature=Value(dtype="int64")))
print(features)
dataset = load_dataset(path=f"graphs-datasets/unbalanced-motifs-500K", split="train", features=features)
```
Last line will crash and say 'TypeError: argument of type 'Sequence' is not iterable'.
Full stack:
```
Traceback (most recent call last):
File "pretrain_tokengt.py", line 131, in <module>
main(output_folder = "../workspace/pretraining",
File "pretrain_tokengt.py", line 52, in main
dataset = load_dataset(path=f"graphs-datasets/{dataset_name}", split="train", features=features)
File "huggingface_env/lib/python3.8/site-packages/datasets/load.py", line 1718, in load_dataset
builder_instance = load_dataset_builder(
File "huggingface_env/lib/python3.8/site-packages/datasets/load.py", line 1514, in load_dataset_builder
builder_instance: DatasetBuilder = builder_cls(
File "huggingface_env/lib/python3.8/site-packages/datasets/builder.py", line 321, in __init__
info.update(self._info())
File "huggingface_env/lib/python3.8/site-packages/datasets/packaged_modules/json/json.py", line 62, in _info
return datasets.DatasetInfo(features=self.config.features)
File "<string>", line 20, in __init__
File "huggingface_env/lib/python3.8/site-packages/datasets/info.py", line 155, in __post_init__
self.features = Features.from_dict(self.features)
File "huggingface_env/lib/python3.8/site-packages/datasets/features/features.py", line 1599, in from_dict
obj = generate_from_dict(dic)
File "huggingface_env/lib/python3.8/site-packages/datasets/features/features.py", line 1282, in generate_from_dict
return {key: generate_from_dict(value) for key, value in obj.items()}
File "huggingface_env/lib/python3.8/site-packages/datasets/features/features.py", line 1282, in <dictcomp>
return {key: generate_from_dict(value) for key, value in obj.items()}
File "huggingface_env/lib/python3.8/site-packages/datasets/features/features.py", line 1281, in generate_from_dict
if "_type" not in obj or isinstance(obj["_type"], dict):
TypeError: argument of type 'Sequence' is not iterable
```
### Expected behavior
For it not to crash.
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-5.14.0-1054-oem-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 8.0.0
- Pandas version: 1.4.3
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I_kwDODunzps5XW7Sy
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Dataset joelito/mc4_legal does not work with multiple files
|
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[
"Thanks for reporting @JoelNiklaus.\r\n\r\nPlease note that since we moved all dataset loading scripts to the Hub, the issues and pull requests relative to specific datasets are directly handled on the Hub, in their Community tab. I'm transferring this issue there: https://huggingface.co/datasets/joelito/mc4_legal/discussions\r\n\r\nI am also having a look at the bug in your script.",
"Issue transferred to: https://huggingface.co/datasets/joelito/mc4_legal/discussions/1"
] | 2022-11-28T00:16:16
| 2022-11-28T07:22:42
| 2022-11-28T07:22:42
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
The dataset https://huggingface.co/datasets/joelito/mc4_legal works for languages like bg with a single data file, but not for languages with multiple files like de. It shows zero rows for the de dataset.
joelniklaus@Joels-MacBook-Pro ~/N/P/C/L/p/m/mc4_legal (main) [1]> python test_mc4_legal.py (debug)
Found cached dataset mc4_legal (/Users/joelniklaus/.cache/huggingface/datasets/mc4_legal/de/0.0.0/fb6952a097180f8c936e2a7605525ff670354a344fc1a2c70107684d3f7cb02f)
Dataset({
features: ['index', 'url', 'timestamp', 'matches', 'text'],
num_rows: 0
})
joelniklaus@Joels-MacBook-Pro ~/N/P/C/L/p/m/mc4_legal (main)> python test_mc4_legal.py (debug)
Downloading and preparing dataset mc4_legal/bg to /Users/joelniklaus/.cache/huggingface/datasets/mc4_legal/bg/0.0.0/fb6952a097180f8c936e2a7605525ff670354a344fc1a2c70107684d3f7cb02f...
Downloading data files: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 1240.55it/s]
Dataset mc4_legal downloaded and prepared to /Users/joelniklaus/.cache/huggingface/datasets/mc4_legal/bg/0.0.0/fb6952a097180f8c936e2a7605525ff670354a344fc1a2c70107684d3f7cb02f. Subsequent calls will reuse this data.
Dataset({
features: ['index', 'url', 'timestamp', 'matches', 'text'],
num_rows: 204
})
### Steps to reproduce the bug
import datasets
from datasets import load_dataset, get_dataset_config_names
language = "bg"
test = load_dataset("joelito/mc4_legal", language, split='train')
### Expected behavior
It should display the correct number of rows for the de dataset which should be a large number (thousands or more).
### Environment info
Package Version
------------------------ --------------
absl-py 1.3.0
aiohttp 3.8.1
aiosignal 1.2.0
astunparse 1.6.3
async-timeout 4.0.2
attrs 22.1.0
beautifulsoup4 4.11.1
blinker 1.4
blis 0.7.8
Bottleneck 1.3.4
brotlipy 0.7.0
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cffi 1.15.1
chardet 4.0.0
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datasets 2.6.1
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docker-pycreds 0.4.0
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flatbuffers 20210226132247
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torch 1.13.0
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I_kwDODunzps5XU89f
| 5,304
|
timit_asr doesn't load the test split.
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[
"The [timit_asr.py](https://huggingface.co/datasets/timit_asr/blob/main/timit_asr.py) script iterates over the WAV files per split directory using this:\r\n```python\r\nwav_paths = sorted(Path(data_dir).glob(f\"**/{split}/**/*.wav\"))\r\nwav_paths = wav_paths if wav_paths else sorted(Path(data_dir).glob(f\"**/{split.upper()}/**/*.WAV\"))\r\n```\r\n\r\nCan you check that there is a directory named \"test\" somewhere in your timit data directory ?"
] | 2022-11-26T10:18:22
| 2023-02-10T16:33:21
| 2023-02-10T16:33:21
|
NONE
| null | null | null | null |
### Describe the bug
When I use the function ```timit = load_dataset('timit_asr', data_dir=data_dir)```, it only loads train split, not test split.
I tried to change the directory and filename to lower case to upper case for the test split, but it does not work at all.
```python
DatasetDict({
train: Dataset({
features: ['file', 'audio', 'text', 'phonetic_detail', 'word_detail', 'dialect_region', 'sentence_type', 'speaker_id', 'id'],
num_rows: 4620
})
test: Dataset({
features: ['file', 'audio', 'text', 'phonetic_detail', 'word_detail', 'dialect_region', 'sentence_type', 'speaker_id', 'id'],
num_rows: 0
})
})
```
The directory structure of both splits are same. (DIALECT_REGION / SPEAKER_CODE / DATA_FILES)
### Steps to reproduce the bug
1. just use ```timit = load_dataset('timit_asr', data_dir=data_dir)```
### Expected behavior
```python
DatasetDict({
train: Dataset({
features: ['file', 'audio', 'text', 'phonetic_detail', 'word_detail', 'dialect_region', 'sentence_type', 'speaker_id', 'id'],
num_rows: 4620
})
test: Dataset({
features: ['file', 'audio', 'text', 'phonetic_detail', 'word_detail', 'dialect_region', 'sentence_type', 'speaker_id', 'id'],
num_rows: 1680
})
})
```
### Environment info
- ubuntu 20.04
- python 3.9.13
- datasets 2.7.1
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| 1,464,681,871
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I_kwDODunzps5XTUWP
| 5,298
|
Bug in xopen with Windows pathnames
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[] | 2022-11-25T15:21:32
| 2022-11-29T08:21:25
| 2022-11-29T08:21:25
|
MEMBER
| null | null | null | null |
Currently, `xopen` function has a bug with local Windows pathnames:
From its implementation:
```python
def xopen(file: str, mode="r", *args, **kwargs):
file = _as_posix(PurePath(file))
main_hop, *rest_hops = file.split("::")
if is_local_path(main_hop):
return open(file, mode, *args, **kwargs)
```
On a Windows machine, if we pass the argument:
```python
xopen("C:\\Users\\USERNAME\\filename.txt")
```
it returns
```python
open("C:/Users/USERNAME/filename.txt")
```
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I_kwDODunzps5XS1Bs
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Bug in xjoin with Windows pathnames
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[] | 2022-11-25T13:29:33
| 2022-11-29T08:05:13
| 2022-11-29T08:05:13
|
MEMBER
| null | null | null | null |
Currently, `xjoin` function has a bug with local Windows pathnames: instead of returning the OS-dependent join pathname, it always returns it in POSIX format.
```python
from datasets.download.streaming_download_manager import xjoin
path = xjoin("C:\\Users\\USERNAME", "filename.txt")
```
Join path should be:
```python
"C:\\Users\\USERNAME\\filename.txt"
```
However it is:
```python
"C:/Users/USERNAME/filename.txt"
```
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| 3 days, 18:35:40
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| 1,464,006,743
|
I_kwDODunzps5XQvhX
| 5,295
|
Extractions failed when .zip file located on read-only path (e.g., SageMaker FastFile mode)
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[
"Hi ! Thanks for reporting. Indeed the lock file should be placed in a directory with write permission (e.g. in the directory where the archive is extracted).",
"I opened https://github.com/huggingface/datasets/pull/5320 to fix this - it places the lock file in the cache directory instead of trying to put in next to the ZIP where it's read-only"
] | 2022-11-25T03:59:43
| 2023-07-21T14:39:09
| 2023-07-21T14:39:09
|
NONE
| null | null | null | null |
### Describe the bug
Hi,
`load_dataset()` does not work .zip files located on a read-only directory. Looks like it's because Dataset creates a lock file in the [same directory](https://github.com/huggingface/datasets/blob/df4bdd365f2abb695f113cbf8856a925bc70901b/src/datasets/utils/extract.py) as the .zip file.
Encountered this when attempting `load_dataset()` on a datadir with SageMaker FastFile mode.
### Steps to reproduce the bug
```python
# Showing relevant lines only.
hyperparameters = {
"dataset_name": "ydshieh/coco_dataset_script",
"dataset_config_name": 2017,
"data_dir": "/opt/ml/input/data/coco",
"cache_dir": "/tmp/huggingface-cache", # Fix dataset complains out-of-space.
...
}
estimator = PyTorch(
base_job_name="clip",
source_dir="../src/sm-entrypoint",
entry_point="run_clip.py", # Transformers/src/examples/pytorch/contrastive-image-text/run_clip.py
framework_version="1.12",
py_version="py38",
hyperparameters=hyperparameters,
instance_count=1,
instance_type="ml.p3.16xlarge",
volume_size=100,
distribution={"smdistributed": {"dataparallel": {"enabled": True}}},
)
fast_file = lambda x: TrainingInput(x, input_mode='FastFile')
estimator.fit(
{
"pre-trained": fast_file("s3://vm-sagemakerr-us-east-1/clip/pre-trained-checkpoint/"),
"coco": fast_file("s3://vm-sagemakerr-us-east-1/clip/coco-zip-files/"),
}
)
```
Error message:
```text
ErrorMessage "OSError: [Errno 30] Read-only file system: '/opt/ml/input/data/coco/image_info_test2017.zip.lock'
"""
The above exception was the direct cause of the following exception
Traceback (most recent call last)
File "/opt/conda/lib/python3.8/runpy.py", line 194, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/opt/conda/lib/python3.8/runpy.py", line 87, in _run_code
exec(code, run_globals)
File "/opt/conda/lib/python3.8/site-packages/mpi4py/__main__.py", line 7, in <module>
main()
File "/opt/conda/lib/python3.8/site-packages/mpi4py/run.py", line 198, in main
run_command_line(args)
File "/opt/conda/lib/python3.8/site-packages/mpi4py/run.py", line 47, in run_command_line
run_path(sys.argv[0], run_name='__main__')
File "/opt/conda/lib/python3.8/runpy.py", line 265, in run_path
return _run_module_code(code, init_globals, run_name,
File "/opt/conda/lib/python3.8/runpy.py", line 97, in _run_module_code
_run_code(code, mod_globals, init_globals,
File "run_clip_smddp.py", line 594, in <module>
File "run_clip_smddp.py", line 327, in main
dataset = load_dataset(
File "/opt/conda/lib/python3.8/site-packages/datasets/load.py", line 1741, in load_dataset
builder_instance.download_and_prepare(
File "/opt/conda/lib/python3.8/site-packages/datasets/builder.py", line 822, in download_and_prepare
self._download_and_prepare(
File "/opt/conda/lib/python3.8/site-packages/datasets/builder.py", line 1555, in _download_and_prepare
super()._download_and_prepare(
File "/opt/conda/lib/python3.8/site-packages/datasets/builder.py", line 891, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/root/.cache/huggingface/modules/datasets_modules/datasets/ydshieh--coco_dataset_script/e033205c0266a54c10be132f9264f2a39dcf893e798f6756d224b1ff5078998f/coco_dataset_script.py", line 123, in _split_generators
archive_path = dl_manager.download_and_extract(_DL_URLS)
File "/opt/conda/lib/python3.8/site-packages/datasets/download/download_manager.py", line 447, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/opt/conda/lib/python3.8/site-packages/datasets/download/download_manager.py", line 419, in extract
extracted_paths = map_nested(
File "/opt/conda/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 472, in map_nested
mapped = pool.map(_single_map_nested, split_kwds)
File "/opt/conda/lib/python3.8/multiprocessing/pool.py", line 364, in map
return self._map_async(func, iterable, mapstar, chunksize).get()
File "/opt/conda/lib/python3.8/multiprocessing/pool.py", line 771, in get
raise self._value
OSError: [Errno 30] Read-only file system: '/opt/ml/input/data/coco/image_info_test2017.zip.lock'"
```
### Expected behavior
`load_dataset()` to succeed, just like when .zip file is passed in SageMaker File mode.
### Environment info
* datasets-2.7.1
* transformers-4.24.0
* python-3.8
* torch-1.12
* SageMaker PyTorch DLC
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| 1,463,669,201
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I_kwDODunzps5XPdHR
| 5,293
|
Support streaming datasets with pathlib.Path.with_suffix
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[] | 2022-11-24T17:52:08
| 2022-11-29T07:06:33
| 2022-11-29T07:06:33
|
MEMBER
| null | null | null | null |
Extend support for streaming datasets that use `pathlib.Path.with_suffix`.
This feature will be useful e.g. for datasets containing text files and annotated files with the same name but different extension.
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Missing documentation build for versions 2.7.1 and 2.6.2
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[
"- Build docs for 2.6.2:\r\n - Commit: a6a5a1cf4cdf1e0be65168aed5a327f543001fe8\r\n - Build docs GH Action: https://github.com/huggingface/datasets/actions/runs/3539470622/jobs/5941404044\r\n- Build docs for 2.7.1:\r\n - Commit: 5ef1ab1cc06c2b7a574bf2df454cd9fcb071ccb2\r\n - Build docs GH Action: https://github.com/huggingface/datasets/actions/runs/3539574442/jobs/5941636792"
] | 2022-11-24T09:42:10
| 2022-11-24T10:10:02
| 2022-11-24T10:10:02
|
MEMBER
| null | null | null | null |
After the patch releases [2.7.1](https://github.com/huggingface/datasets/releases/tag/2.7.1) and [2.6.2](https://github.com/huggingface/datasets/releases/tag/2.6.2), the online docs were not properly built (the build_documentation workflow was not triggered).
There was a fix by:
- #5291
However, both documentations were built from main branch, instead of their corresponding version branch.
We are rebuilding them.
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Lossy json serialization - deserialization of dataset info
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[
"Hi ! JSON is a lossy format indeed. If you want to keep the feature types or other metadata I'd encourage you to store them as well. For example you can use `dataset.info.write_to_directory` and `DatasetInfo.from_directory` to store the feature types, split info, description, license etc."
] | 2022-11-23T17:20:15
| 2022-11-25T12:53:51
| null |
NONE
| null | null | null | null |
### Describe the bug
Saving a dataset to disk as json (using `to_json`) and then loading it again (using `load_dataset`) results in features whose labels are not type-cast correctly. In the code snippet below, `features.label` should have a label of type `ClassLabel` but has type `Value` instead.
### Steps to reproduce the bug
```
from datasets import load_dataset
def test_serdes_from_json(d):
dataset = load_dataset(d, split="train")
dataset.to_json('_test')
dataset_loaded = load_dataset("json", data_files='_test', split='train')
try:
assert dataset_loaded.info.features == dataset.info.features, "features unequal!"
except Exception as ex:
print(f'{ex}')
print(f'expected {dataset.info.features}, \nactual { dataset_loaded.info.features }')
test_serdes_from_json('rotten_tomatoes')
```
Output
```
features unequal!
expected {'text': Value(dtype='string', id=None), 'label': ClassLabel(names=['neg', 'pos'], id=None)},
actual {'text': Value(dtype='string', id=None), 'label': Value(dtype='int64', id=None)}
```
### Expected behavior
The deserialized `features.label` should have type `ClassLabel`.
### Environment info
- `datasets` version: 2.6.1
- Platform: Linux-5.10.144-127.601.amzn2.x86_64-x86_64-with-glibc2.17
- Python version: 3.7.13
- PyArrow version: 7.0.0
- Pandas version: 1.2.3
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FileNotFoundError: Couldn't find file at https://dumps.wikimedia.org/enwiki/20220301/dumpstatus.json
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[
"I found a solution \r\n\r\nIf you specifically install datasets==1.18 and then run\r\n\r\nimport datasets\r\nwiki = datasets.load_dataset('wikipedia', '20200501.en')\r\nthen this should work (it worked for me.)",
"I have the same problem here but installing datasets==1.18 wont work for me\r\n",
"This works with datasets==2.14.5\r\n\r\n`>>> datasets.__version__`\r\n`'2.14.5'`\r\n`>>> ds = load_dataset(\"wikimedia/wikipedia\", \"20231101.en\")`\r\n\r\nsource:\r\nhttps://huggingface.co/datasets/wikimedia/wikipedia"
] | 2022-11-23T14:54:15
| 2024-11-23T01:16:41
| 2022-11-25T11:33:14
|
NONE
| null | null | null | null |
### Describe the bug
I follow the steps provided on the website [https://huggingface.co/datasets/wikipedia](https://huggingface.co/datasets/wikipedia)
$ pip install apache_beam mwparserfromhell
>>> from datasets import load_dataset
>>> load_dataset("wikipedia", "20220301.en")
however this results in the following error:
raise MissingBeamOptions(
datasets.builder.MissingBeamOptions: Trying to generate a dataset using Apache Beam, yet no Beam Runner or PipelineOptions() has been provided in `load_dataset` or in the builder arguments. For big datasets it has to run on large-scale data processing tools like Dataflow, Spark, etc. More information about Apache Beam runners at https://beam.apache.org/documentation/runners/capability-matrix/
If you really want to run it locally because you feel like the Dataset is small enough, you can use the local beam runner called `DirectRunner` (you may run out of memory).
Example of usage:
`load_dataset('wikipedia', '20220301.en', beam_runner='DirectRunner')`
If I then prompt the system with:
>>> load_dataset('wikipedia', '20220301.en', beam_runner='DirectRunner')
the following error occurs:
raise FileNotFoundError(f"Couldn't find file at {url}")
FileNotFoundError: Couldn't find file at https://dumps.wikimedia.org/enwiki/20220301/dumpstatus.json
Here is the exact code:
Python 3.10.6 (main, Nov 2 2022, 18:53:38) [GCC 11.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> from datasets import load_dataset
>>> load_dataset('wikipedia', '20220301.en')
Downloading and preparing dataset wikipedia/20220301.en to /home/[EDITED]/.cache/huggingface/datasets/wikipedia/20220301.en/2.0.0/aa542ed919df55cc5d3347f42dd4521d05ca68751f50dbc32bae2a7f1e167559...
Downloading: 100%|████████████████████████████████████████████████████████████████████████████| 15.3k/15.3k [00:00<00:00, 22.2MB/s]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.10/dist-packages/datasets/load.py", line 1741, in load_dataset
builder_instance.download_and_prepare(
File "/usr/local/lib/python3.10/dist-packages/datasets/builder.py", line 822, in download_and_prepare
self._download_and_prepare(
File "/usr/local/lib/python3.10/dist-packages/datasets/builder.py", line 1879, in _download_and_prepare
raise MissingBeamOptions(
datasets.builder.MissingBeamOptions: Trying to generate a dataset using Apache Beam, yet no Beam Runner or PipelineOptions() has been provided in `load_dataset` or in the builder arguments. For big datasets it has to run on large-scale data processing tools like Dataflow, Spark, etc. More information about Apache Beam runners at https://beam.apache.org/documentation/runners/capability-matrix/
If you really want to run it locally because you feel like the Dataset is small enough, you can use the local beam runner called `DirectRunner` (you may run out of memory).
Example of usage:
`load_dataset('wikipedia', '20220301.en', beam_runner='DirectRunner')`
>>> load_dataset('wikipedia', '20220301.en', beam_runner='DirectRunner')
Downloading and preparing dataset wikipedia/20220301.en to /home/[EDITED]/.cache/huggingface/datasets/wikipedia/20220301.en/2.0.0/aa542ed919df55cc5d3347f42dd4521d05ca68751f50dbc32bae2a7f1e167559...
Downloading: 100%|████████████████████████████████████████████████████████████████████████████| 15.3k/15.3k [00:00<00:00, 18.8MB/s]
Downloading data files: 0%| | 0/1 [00:00<?, ?it/s]Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/local/lib/python3.10/dist-packages/datasets/load.py", line 1741, in load_dataset
builder_instance.download_and_prepare(
File "/usr/local/lib/python3.10/dist-packages/datasets/builder.py", line 822, in download_and_prepare
self._download_and_prepare(
File "/usr/local/lib/python3.10/dist-packages/datasets/builder.py", line 1909, in _download_and_prepare
super()._download_and_prepare(
File "/usr/local/lib/python3.10/dist-packages/datasets/builder.py", line 891, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/home/rorytol/.cache/huggingface/modules/datasets_modules/datasets/wikipedia/aa542ed919df55cc5d3347f42dd4521d05ca68751f50dbc32bae2a7f1e167559/wikipedia.py", line 945, in _split_generators
downloaded_files = dl_manager.download_and_extract({"info": info_url})
File "/usr/local/lib/python3.10/dist-packages/datasets/download/download_manager.py", line 447, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/usr/local/lib/python3.10/dist-packages/datasets/download/download_manager.py", line 311, in download
downloaded_path_or_paths = map_nested(
File "/usr/local/lib/python3.10/dist-packages/datasets/utils/py_utils.py", line 444, in map_nested
mapped = [
File "/usr/local/lib/python3.10/dist-packages/datasets/utils/py_utils.py", line 445, in <listcomp>
_single_map_nested((function, obj, types, None, True, None))
File "/usr/local/lib/python3.10/dist-packages/datasets/utils/py_utils.py", line 346, in _single_map_nested
return function(data_struct)
File "/usr/local/lib/python3.10/dist-packages/datasets/download/download_manager.py", line 338, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/usr/local/lib/python3.10/dist-packages/datasets/utils/file_utils.py", line 183, in cached_path
output_path = get_from_cache(
File "/usr/local/lib/python3.10/dist-packages/datasets/utils/file_utils.py", line 530, in get_from_cache
raise FileNotFoundError(f"Couldn't find file at {url}")
FileNotFoundError: Couldn't find file at https://dumps.wikimedia.org/enwiki/20220301/dumpstatus.json
### Steps to reproduce the bug
$ pip install apache_beam mwparserfromhell
>>> from datasets import load_dataset
>>> load_dataset("wikipedia", "20220301.en")
>>> load_dataset('wikipedia', '20220301.en', beam_runner='DirectRunner')
### Expected behavior
Download the dataset
### Environment info
Running linux on a remote workstation operated through a macbook terminal
Python 3.10.6
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Features of IterableDataset set to None by remove column
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"Related to https://github.com/huggingface/datasets/issues/5245",
"#self-assign",
"Thanks @lhoestq and @alvarobartt!\r\n\r\nThis would be extremely helpful to have working for the Whisper fine-tuning event - we're **only** training using streaming mode, so it'll be quite important to have this feature working to make training as easy as possible!\r\n\r\n_c.f._ https://twitter.com/sanchitgandhi99/status/1592188332171493377",
"> Thanks @lhoestq and @alvarobartt!\n> \n> \n> \n> This would be extremely helpful to have working for the Whisper fine-tuning event - we're **only** training using streaming mode, so it'll be quite important to have this feature working to make training as easy as possible!\n> \n> \n> \n> _c.f._ https://twitter.com/sanchitgandhi99/status/1592188332171493377\n\nI'm almost done with at least a temporary fix to `rename_column`, `rename_columns`, and `remove_columns`, just trying to figure out how to extend it to the `map` function itself!\n\nI'll probably open the PR for review either tomorrow or Sunday hopefully! Glad I can help you and HuggingFace 🤗 ",
"Awesome - thank you so much for this PR @alvarobartt! Is much appreciated!",
"@sanchit-gandhi PR is ready and open for review at #5287, but there's still one issue I may need @lhoestq's input :hugs:",
"Let us know @sanchit-gandhi if you need a new release of `datasets` soon with this fix included :)",
"Thanks for the fix guys! We can direct people to install `datasets` from main if that's easier!",
"Hey guys, any update around this? I'm facing the same issue with a streamable dataset. ",
"Hi @asennoussi so this was already fixed and released as part of https://github.com/huggingface/datasets/releases/tag/2.8.0, so you should be able to install it as `pip install datasets==2.8.0` or just to use `pip install datasets --upgrade` to get the latest version, as of now, the https://github.com/huggingface/datasets/releases/tag/2.9.0 released last week! 🤗",
"Still facing the same issue though: \r\n```\r\nfrom datasets import IterableDatasetDict, load_dataset\r\n\r\nraw_datasets = vectorized_datasets = IterableDatasetDict()\r\n\r\n\r\nraw_datasets[\"train\"] = load_dataset(\"asennoussi/private\", split=\"train\", use_auth_token=True, streaming=True)\r\nraw_datasets[\"test\"] = load_dataset(\"asennoussi/private\", split=\"test\", use_auth_token=True, streaming=True)\r\n\r\nprint(\"Original features: \", raw_datasets['train'].features.keys())\r\n\r\n...\r\n\r\ndef prepare_dataset(batch):\r\n\r\n # load and (possibly) resample audio datato 16kHz\r\n audio = batch[\"audio\"]\r\n\r\n # compute log-Mel input features from input audio array \r\n batch[\"input_features\"] = processor.feature_extractor(audio[\"array\"], sampling_rate=audio[\"sampling_rate\"]).input_features[0]\r\n # compute input length of audio sample in seconds\r\n batch[\"input_length\"] = len(audio[\"array\"]) / audio[\"sampling_rate\"]\r\n \r\n # optional pre-processing steps\r\n transcription = batch[\"sentence\"]\r\n \r\n # encode target text to label ids\r\n batch[\"labels\"] = processor.tokenizer(transcription).input_ids\r\n batch[\"labels_length\"] = len(batch[\"labels\"])\r\n return batch\r\n...\r\nvectorized_datasets = vectorized_datasets.remove_columns(['input_length', 'labels_length']+list(next(iter(raw_datasets.values())).features))\r\nprint(\"Processed features: \", vectorized_datasets['train'].features)\r\nprint(\"First sample:\", next(iter(vectorized_datasets['train'])))\r\n\r\n```\r\n\r\nOutput: \r\n```\r\nOriginal features: dict_keys(['path', 'audio', 'sentence'])\r\nProcessed features: None\r\n```",
"Hmm weird, could you try to print\r\n\r\n```python\r\nprint(\"Processed features: \", vectorized_datasets['train'].features)\r\n```\r\n\r\nagain after iterating over the `vectorized_datasets`? In the code above, should be last line :)",
"Didn't seem to fix it: \r\n```\r\nOriginal features: dict_keys(['path', 'audio', 'sentence'])\r\nProcessed features: None\r\nProcessed features: None\r\n```",
"Actually the culprit looks to be this one: \r\n`vectorized_datasets = raw_datasets.map(prepare_dataset).with_format(\"torch\")`\r\nWhen I remove this line: `vectorized_datasets = vectorized_datasets.remove_columns(['input_length', 'labels_length']+list(next(iter(raw_datasets.values())).features))`\r\n\r\nI still get \r\n```\r\nProcessed features: None\r\n```",
"The culprit is definitely `.map` \r\nJust validated it. \r\nAny idea please? ",
"> The culprit is definitely `.map` Just validated it. Any idea please?\r\n\r\nYes, indeed `.map` losses the features, because AFAIK pre-fetching the data to infer the features is expensive and not ideal, that's part of this issue https://github.com/huggingface/datasets/issues/3888\r\n\r\nAnyway, now you can pass the `features` as a param to `.map` as follows:\r\n\r\n```python\r\nfrom datasets import Features\r\nvectorized_datasets = raw_datasets.map(\r\n prepare_dataset,\r\n features=Features(\r\n {\"path\": raw_datasets[\"train\"].info.features[\"path\"], \"audio\": raw_datasets[\"train\"].info.features[\"audio\"], \"sentence\": raw_datasets[\"train\"].info.features[\"sentence\"]}\r\n ),\r\n).with_format(\"torch\")\r\n```\r\n\r\nAlso, to let you know, when calling `.remove_columns` over an `IterableDataset`, the `features` are not lost, as well as `.rename_column` and `rename_columns` :)\r\n\r\nMore information about the latter at https://github.com/huggingface/datasets/pull/5287",
"@asennoussi alternatively you can just call `._resolve_features()` from your `IterableDataset` and it will pre-fetch the data to resolve the features, but note that feature-inference is not as accurate as if you manually specify which features and feature-types the `IterableDataset` has, as mentioned in the comment above, the alternative is to provide `features` param to `.map` :hugs:",
"Got it thanks a lot! ",
"> > The culprit is definitely `.map` Just validated it. Any idea please?\n> \n> Yes, indeed `.map` losses the features, because AFAIK pre-fetching the data to infer the features is expensive and not ideal, that's part of this issue [#3888](https://github.com/huggingface/datasets/issues/3888)\n> \n> Anyway, now you can pass the `features` as a param to `.map` as follows:\n> \n> from datasets import Features\n> vectorized_datasets = raw_datasets.map(\n> prepare_dataset,\n> features=Features(\n> {\"path\": raw_datasets[\"train\"].info.features[\"path\"], \"audio\": raw_datasets[\"train\"].info.features[\"audio\"], \"sentence\": raw_datasets[\"train\"].info.features[\"sentence\"]}\n> ),\n> ).with_format(\"torch\")\n> Also, to let you know, when calling `.remove_columns` over an `IterableDataset`, the `features` are not lost, as well as `.rename_column` and `rename_columns` :)\n> \n> More information about the latter at [#5287](https://github.com/huggingface/datasets/pull/5287)\n\nI am very late to the game, but facing the same issue still after almost 2 years. Our dataset type is IterableDatasetDict and after mapping we still get the none features. We needed the feature names to be able to in later stage use interleave_datasets() to combine two datasets together, otherwise we got errors. I just want to mention here, if somebody is using a function like prepare_dataset(batch), for whatever feature you produce here, you need to only cast these features manually to your features. Just as an example:\n\n```python\nds = IterableDatasetDict()\n\nds[\"train\"] = load_dataset(str(DATA.DIR), \"default\", split=\"train\", trust_remote_code=True, streaming=True)\n\nds = ds.cast_column(\"audio_filepath\", Audio(sampling_rate=None))\n\ndef prepare_dataset(batch):\n audio = batch[\"audio_filepath\"]\n # compute log-Mel input features from input audio array\n batch[\"input_features\"] = feature_extractor(\n audio[\"array\"], sampling_rate=audio[\"sampling_rate\"]\n ).input_features[0]\n # encode target text to label ids\n batch[\"labels\"] = tokenizer(batch[\"text\"]).input_ids\n return batch\n\nadd_new_features = Features({'input_features': Sequence(feature=Sequence(feature=Value(dtype='float32', id=None), length=-1, id=None), length=-1, id=None),\n 'labels': Sequence(feature=Value(dtype='int64', id=None), length=-1, id=None)}) # features you produce in your prepare_dataset()\n\nds = ds.map(prepare_dataset) \nds = ds.cast(add_new_features)\n```"
] | 2022-11-23T10:54:59
| 2025-02-07T11:36:41
| 2022-11-28T12:53:24
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
The `remove_column` method of the IterableDataset sets the dataset features to None.
### Steps to reproduce the bug
```python
from datasets import Audio, load_dataset
# load LS in streaming mode
dataset = load_dataset("librispeech_asr", "clean", split="validation", streaming=True)
# check original features
print("Original features: ", dataset.features.keys())
# define features to remove: we KEEP audio and text
COLUMNS_TO_REMOVE = ['chapter_id', 'speaker_id', 'file', 'id']
dataset = dataset.remove_columns(COLUMNS_TO_REMOVE)
# check processed features, uh-oh!
print("Processed features: ", dataset.features)
# streaming the first audio sample still works
print("First sample:", next(iter(ds)))
```
**Print Output:**
```
Original features: dict_keys(['file', 'audio', 'text', 'speaker_id', 'chapter_id', 'id'])
Processed features: None
First sample: {'audio': {'path': '2277-149896-0000.flac', 'array': array([ 0.00186157, 0.0005188 , 0.00024414, ..., -0.00097656,
-0.00109863, -0.00146484]), 'sampling_rate': 16000}, 'text': "HE WAS IN A FEVERED STATE OF MIND OWING TO THE BLIGHT HIS WIFE'S ACTION THREATENED TO CAST UPON HIS ENTIRE FUTURE"}
```
### Expected behavior
The features should be those **not** removed by the `remove_column` method, i.e. audio and text.
### Environment info
- `datasets` version: 2.7.1
- Platform: Linux-5.10.133+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.15
- PyArrow version: 9.0.0
- Pandas version: 1.3.5
(Running on Google Colab for a blog post: https://colab.research.google.com/drive/1ySCQREPZEl4msLfxb79pYYOWjUZhkr9y#scrollTo=8pRDGiVmH2ml)
cc @polinaeterna @lhoestq
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Support cloud storage in load_dataset
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"Or for example an archive on GitHub releases! Before I added support for JXL (locally only, PR still pending) I was considering hosting my files on GitHub instead...",
"+1 to this. I would like to use 'audiofolder' with a data_dir that's on S3, for example. I don't want to upload my dataset to the Hub, but I would find all the fingerprinting/caching features useful.",
"Adding to the conversation, Dask also uses `fsspec` for this feature.\r\n\r\n[Dask: How to connect to remote data](https://docs.dask.org/en/stable/how-to/connect-to-remote-data.html)\r\n\r\nHappy to help on this feature :D ",
"+1 to this feature request since I think it also tackles my use-case. I am collaborating with a team, working with a loading script which takes some time to generate the dataset artifacts. It would be very handy to use this as a cloud cache to avoid duplicating the effort. \r\n\r\nCurrently we could use `builder.download_and_prepare(path_to_cloud_storage, storage_options, ...)` to cache the artifacts to cloud storage, but then `builder.as_dataset()` yields `NotImplementedError: Loading a dataset cached in SomeCloudFileSystem is not supported`",
"Makes sense ! If you want to load locally a dataset that you download_and_prepared on a cloud storage, you would use `load_dataset(path_to_cloud_storage)` indeed. It would download the data from the cloud storage, cache them locally, and return a `Dataset`.",
"It seems currently the `cached_path` function handles all URLs by `get_from_cache` that only supports `ftp` and `http(s)` here:\r\nhttps://github.com/huggingface/datasets/blob/b5672a956d5de864e6f5550e493527d962d6ae55/src/datasets/utils/file_utils.py#L181\r\n\r\nI guess one can add another condition that handles `s3://` or `gs://` URLs via `fsspec` here.",
"I could use this functionality, so I put together a PR using @kyamagu's suggestion to use `fsspec` in `datasets.utils.file_utils`\r\n\r\nhttps://github.com/huggingface/datasets/pull/5580",
"Thanks @dwyatte for adding support for fsspec urls\r\n\r\nLet me just reopen this since the original issue is not resolved",
"I'm not yet understanding how to use https://github.com/huggingface/datasets/pull/5580 in order to use `load_dataset(data_files=\"s3://...\")`. Any help/example would be much appreciated :) thanks! ",
"It's still not officially supported x) But you can try to update `request_etag` in `file_utils.py` to use `fsspec_head` instead of `http_head`. It is responsible of getting the ETags of the remote files for caching. This change may do the trick for S3 urls",
"Thank you for your guys help on this and merging in #5580. I manually pulled the changes to my local datasets package (datasets.utils.file_utils.py) since it only seemed to be this file that was changed in the PR and I'm getting the error: \r\nInvalidSchema: No connection adapters were found for 's3://bucket/folder/'. I'm calling load_dataset using the S3 URI. When I use the S3 URL I get HTTPError: 403 Client Error. \r\nAm I not supposed to use the S3 URI? How do I pull in the changes from this merge? I'm running datasets 2.10.1. ",
"The current implementation depends on gcsfs/s3fs being able to authenticate through some other means e.g., environmental variables. For AWS, it looks like you can set `AWS_ACCESS_KEY_ID`, `AWS_SECRET_ACCESS_KEY`, and `AWS_SESSION_TOKEN`\r\n\r\nNote that while testing this just now, I did note a discrepancy between gcsfs and s3fs that we might want to address where gcsfs passes the timeout from `storage_options` [here](https://github.com/huggingface/datasets/blob/3e6269979fc80ae8939294d26298897f0db5b84d/src/datasets/utils/file_utils.py#L333) down into the `aiohttp.ClientSession.request`, but s3fs does not handle this (tries to pass to the `aiobotocore.session.AioSession` constructor raising `TypeError: __init__() got an unexpected keyword argument 'requests_timeout'`).\r\n\r\nIt seems like some work trying to unify kwargs across different fsspec implementations, so if the plan is to pass down `storage_options`, I wonder if we should just let users control the timeout (and other kwargs) using that and if not specified, use the default?",
"> Note that while testing this just now, I did note a discrepancy between gcsfs and s3fs that we might want to address where gcsfs passes the timeout from storage_options [here](https://github.com/huggingface/datasets/blob/3e6269979fc80ae8939294d26298897f0db5b84d/src/datasets/utils/file_utils.py#L333) down into the aiohttp.ClientSession.request, but s3fs does not handle this (tries to pass to the aiobotocore.session.AioSession constructor raising TypeError: __init__() got an unexpected keyword argument 'requests_timeout').\r\n\r\n> It seems like some work trying to unify kwargs across different fsspec implementations, so if the plan is to pass down storage_options, I wonder if we should just let users control the timeout (and other kwargs) and if not specified, use the default?\r\n\r\n@lhoestq here's a small PR for this: https://github.com/huggingface/datasets/pull/5673\r\n\r\n",
"@lhoestq sorry for being a little dense here but I am very keen to use fsspec / adlfs for for a larger image dataset I have for object detection. I have to keep it on Azure storage and would also like to avoid a full download or zipping (so use `load_dataset(..., streaming=True)`. So this development is godsend :) only... I am unable to make it work.\r\n\r\nWould you expect the setup to work for:\r\n- azure blob storage\r\n- image files (not the standard formats `json`, `parquet`....\r\n\r\n? I appreciate that you mostly focus on s3 but it seems that, similar to the [remaining cloud storage functionality](https://huggingface.co/docs/datasets/filesystems#cloud-storage), it should also work for Azure blob storage.\r\n\r\n\r\nI would imagine that something like (Streaming true or false):\r\n```python\r\nd = load_dataset(\"new_dataset.py\", storage_options=storage_options, split=\"train\")\r\n```\r\nwould work with \r\n```python\r\n# new_dataset.py\r\n....\r\n_URL=\"abfs://container/image_folder``` \r\n\r\narchive_path = dl_manager.download(_URL)\r\nsplit_metadata_paths = dl_manager.download(_METADATA_URLS)\r\nreturn [\r\n datasets.SplitGenerator(\r\n name=datasets.Split.TRAIN,\r\n gen_kwargs={\r\n \"annotation_file_path\": split_metadata_paths[\"train\"],\r\n \"files\": dl_manager.iter_files(archive_path)\r\n},\r\n ),\r\n...\r\n```\r\nbut I get \r\n```\r\nTraceback (most recent call last):\r\n... ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/load.py\", line 1797, in load_dataset\r\n builder_instance.download_and_prepare(\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/builder.py\", line 890, in download_and_prepare\r\n self._download_and_prepare(\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/builder.py\", line 1649, in _download_and_prepare\r\n super()._download_and_prepare(\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/builder.py\", line 963, in _download_and_prepare\r\n split_generators = self._split_generators(dl_manager, **split_generators_kwargs)\r\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"~/.cache/huggingface/modules/datasets_modules/datasets/new_dataset/dd26a081eab90074f41fa2c821b458424fde393cc73d3d8241aca956d1fb3aa0/new_dataset_script.py\", line 56, in _split_generators\r\n archive_path = dl_manager.download(_URL)\r\n ^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/download/download_manager.py\", line 427, in download\r\n downloaded_path_or_paths = map_nested(\r\n ^^^^^^^^^^^\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/utils/py_utils.py\", line 435, in map_nested\r\n return function(data_struct)\r\n ^^^^^^^^^^^^^^^^^^^^^\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/download/download_manager.py\", line 453, in _download\r\n return cached_path(url_or_filename, download_config=download_config)\r\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"~/miniconda3/envs/hf/lib/python3.11/site-packages/datasets/utils/file_utils.py\", line 206, in cached_path\r\n raise ValueError(f\"unable to parse {url_or_filename} as a URL or as a local path\")\r\nValueError: unable to parse abfs://container/image_folder as a URL or as a local path\r\n\r\n```\r\n",
"What version of `datasets` are you using ?",
"@lhoestq \r\nhello, i still have problem with loading json from S3:\r\n\r\n\r\nstorage_options = {\r\n \"key\": xxxx,\r\n \"secret\": xxx,\r\n \"endpoint_url\": xxxx\r\n}\r\npath = 's3://xxx/xxxxxxx.json'\r\ndataset = load_dataset(\"json\", data_files=path, storage_options=storage_options)\r\n\r\nand it throws an error:\r\nTypeError: AioSession.__init__() got an unexpected keyword argument 'hf'\r\nand I use the lastest 2.14.4_dev0 version",
"Hi @lhoestq, thanks for getting back to me :) you have been busy over the summer I see... I was on `2.12.0`. I have updated to `2.14.4`. \r\n\r\nNow `d = load_dataset(\"new_dataset.py\", storage_options=storage_options, split=\"train\", streaming=True)` works for Azure blob storage (with a local data loader script) when I explicitly list all blobs (I am struggling to make `fs.ls(<path>)` work in the script to make the list available to the download manager).\r\n\r\n Any chance that it could work out-of-the-box by supplying just the image folder, not the full list of image filenames? It seems that `dl_manager.download(_URL)` always wants one or more (possibly archived) files. In my situation, where I don't want to archive or download, it would be great to just supply the folder (seems reasonably doable with fsspec).\r\n\r\nLet me know if there is anything I can do to help.\r\n\r\nThanks,",
"> Any chance that it could work out-of-the-box by supplying just the image folder, not the full list of image filenames? It seems that dl_manager.download(_URL) always wants one or more (possibly archived) files. In my situation, where I don't want to archive or download, it would be great to just supply the folder (seems reasonably doable with fsspec).\r\n\r\n@mayorblock This is not supported right now, you have to use archives or implement a way to get the list by yourself\r\n\r\n> TypeError: AioSession.init() got an unexpected keyword argument 'hf'\r\n\r\n@hjq133 Can you update `fsspec` and try again ?\r\n\r\n```python\r\npip install -U fsspec\r\n```",
"thanks for your suggestion，it works now ! ",
"I'm seeing same problem as @hjq133 with following versions:\r\n\r\n```\r\ndatasets==2.15.0\r\n(venv) ➜ finetuning-llama2 git:(main) ✗ pip freeze | grep s3fs \r\ns3fs==2023.10.0\r\n(venv) ➜ finetuning-llama2 git:(main) ✗ pip freeze | grep fsspec\r\nfsspec==2023.10.0\r\n```",
"> @lhoestq hello, i still have problem with loading json from S3:\r\n> \r\n> storage_options = { \"key\": xxxx, \"secret\": xxx, \"endpoint_url\": xxxx } path = 's3://xxx/xxxxxxx.json' dataset = load_dataset(\"json\", data_files=path, storage_options=storage_options)\r\n> \r\n> and it throws an error: TypeError: AioSession.**init**() got an unexpected keyword argument 'hf' and I use the lastest 2.14.4_dev0 version\r\n\r\nI am trying to do the same thing, but the loading is just hanging, without any error. \r\n@lhoestq is there any documentation how to load from private s3 buckets?\r\n",
"Hi ! S3 support is still experimental. It seems like there is an extra `hf` field passed to the `s3fs` storage_options that causes this error. I just check the source code of `_prepare_single_hop_path_and_storage_options` and I think you can try passing explicitly your own `storage_options={\"s3\": {...}}`. Also note that it's generally better to load datasets from HF (we run extensive tests and benchmarks for speed and robustness)",
"That worked! Thanks\r\nIt seems thought that `data_dir=...` doesn't work on s3, only `data_files`.\r\n",
"@lhoestq Would this work either with an Azure Blob Storage Container or its respective Azure Machine Learning Datastore? If yes, what would that look like in code? I've tried a couple of combinations but no success so far, on the latest version of `datasets`. I need to migrate a dataset to the Azure cloud, `load_dataset(\"path_to_data\")` worked perfectly while the files were local only. Thank you!\r\n\r\n@mayorblock would you mind sharing how you got it to work? What did you pass as `storage_options`? Would it maybe work without a custom data loader script?",
"This ticket would be of so much help.",
"@lhoestq I've been using this feature for the last year on GCS without problem, but I think we need to fix an issue with S3 and then document the supported calling patterns to reduce confusion\r\n\r\nIt looks like `datasets` uses a default `DownloadConfig` which is where some potentially unintended storage options are getting passed to fsspec\r\n\r\n```\r\nDownloadConfig(\r\n\tcache_dir=None, \r\n\tforce_download=False, \r\n\tresume_download=False, \r\n\tlocal_files_only=False, \r\n\tproxies=None, \r\n\tuser_agent=None, \r\n\textract_compressed_file=False, \r\n\tforce_extract=False, \r\n\tdelete_extracted=False, \r\n\tuse_etag=True, \r\n\tnum_proc=None, \r\n\tmax_retries=1, \r\n\ttoken=None, \r\n\tignore_url_params=False, \r\n\tstorage_options={'hf': {'token': None, 'endpoint': 'https://huggingface.co'}}, \r\n\tdownload_desc=None\r\n)\r\n```\r\n(specifically the `storage_options={'hf': {'token': None, 'endpoint': 'https://huggingface.co'}}` part)\r\n\r\n`gcsfs` is robust to the extra key in storage options for whatever reason, but `s3fs` is not (haven't dug into why). I'm unable to test `adlfs` but it looks like people here got it working\r\n\r\nIs this an issue that needs fixed with s3fs? Or can we avoid passing these default storage options in some cases?\r\n\r\nUpdate: I think probably https://github.com/huggingface/datasets/pull/6127 is where these default storage options were introduced",
"Hmm not sure, maybe it has to do with `_prepare_single_hop_path_and_storage_options` returning the \"hf\" storage options when it shouldn't",
"Also running into this issue downloading a parquet dataset from S3 (Upload worked fine using [current main branch](https://github.com/huggingface/datasets/commit/90b896193a0a315789022580eb4c80305d168d4d)).\r\n`dataset = Dataset.from_parquet('s3://path-to-file')`\r\nraises \r\n`TypeError: AioSession.__init__() got an unexpected keyword argument 'hf'`\r\nFound that the issue is introduced in [#6028](https://github.com/huggingface/datasets/commit/14f6edd9222e577dccb962ed5338b79b73502fa5#diff-8a868b8c1127c5cbe7870bbeec30bd2cbec6696a378e65b66782a6935e3f412e)\r\n\r\nWhen commenting out the __post_init__ part to set 'hf', I am able to download the dataset.",
"Can someone paste a complete example for getting this to work? Running this:\r\n\r\n```python\r\nfrom datasets import load_from_disk, load_dataset\r\nfrom os import environ\r\nfrom s3fs import S3FileSystem\r\n\r\nstorage_options = {\r\n \"key\": \"AzureDiamond\",\r\n \"secret\": \"hunter2\",\r\n \"endpoint_url\": \"https://fly.storage.tigris.dev\"\r\n}\r\n\r\nmodel_name = \"Qwen/Qwen2.5-32B\"\r\ndataset_name = \"mlabonne/FineTome-100k\"\r\n\r\ndataset = load_dataset(\r\n f\"s3://datnybakfu/model-ready/{model_name}/{dataset_name}\",\r\n storage_options=storage_options,\r\n filesystem=S3FileSystem(),\r\n streaming=True,\r\n)\r\n```\r\n\r\nI get the following error trace:\r\n\r\n<details>\r\n<summary>Stacktrace (folded)</summary\r\n\r\n```\r\n---------------------------------------------------------------------------\r\n\r\nFileNotFoundError Traceback (most recent call last)\r\n\r\n[<ipython-input-19-0ae7d5f39c46>](https://localhost:8080/#) in <cell line: 29>()\r\n 27 dataset_name = \"mlabonne/FineTome-100k\"\r\n 28 \r\n---> 29 dataset = load_dataset(\r\n 30 f\"s3://datnybakfu/model-ready/{model_name}/{dataset_name}\",\r\n 31 storage_options=storage_options,\r\n\r\n2 frames\r\n\r\n[/usr/local/lib/python3.10/dist-packages/datasets/load.py](https://localhost:8080/#) in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, verification_mode, keep_in_memory, save_infos, revision, token, streaming, num_proc, storage_options, trust_remote_code, **config_kwargs)\r\n 2130 \r\n 2131 # Create a dataset builder\r\n-> 2132 builder_instance = load_dataset_builder(\r\n 2133 path=path,\r\n 2134 name=name,\r\n\r\n[/usr/local/lib/python3.10/dist-packages/datasets/load.py](https://localhost:8080/#) in load_dataset_builder(path, name, data_dir, data_files, cache_dir, features, download_config, download_mode, revision, token, storage_options, trust_remote_code, _require_default_config_name, **config_kwargs)\r\n 1851 download_config = download_config.copy() if download_config else DownloadConfig()\r\n 1852 download_config.storage_options.update(storage_options)\r\n-> 1853 dataset_module = dataset_module_factory(\r\n 1854 path,\r\n 1855 revision=revision,\r\n\r\n[/usr/local/lib/python3.10/dist-packages/datasets/load.py](https://localhost:8080/#) in dataset_module_factory(path, revision, download_config, download_mode, dynamic_modules_path, data_dir, data_files, cache_dir, trust_remote_code, _require_default_config_name, _require_custom_configs, **download_kwargs)\r\n 1733 )\r\n 1734 else:\r\n-> 1735 raise FileNotFoundError(f\"Couldn't find any data file at {relative_to_absolute_path(path)}.\")\r\n 1736 \r\n 1737 \r\n\r\nFileNotFoundError: Couldn't find any data file at /content/s3:/datnybakfu/model-ready/Qwen/Qwen2.5-32B/mlabonne/FineTome-100k.\r\n```\r\n\r\n</details>",
"Hi, using `s3://` as first argument in load_dataset directly is not supported. You can pass a local path or a HF repository (in the form `username/dataset_name`)\r\n\r\ncc @Wauplin if you have a script to move data from S3 to HF ? I know there is this code adapted from https://github.com/fsspec/filesystem_spec/issues/909 that works well (it creates one commit per file)\r\n\r\n```python\r\nfrom multiprocessing.pool import ThreadPool\r\n\r\nimport fsspec\r\nfrom tqdm import tqdm\r\n\r\ns3_storage_options = {} # add S3 credentials here if needed, e.g. {\"key\": aws_access_key_id, \"secret\": aws_secret_access_key}\r\na = fsspec.get_mapper(\"s3://bucket/dataset_folder\", **s3_storage_options)\r\nb = fsspec.get_mapper(\"hf://datasets/username/dataset_name\")\r\n\r\ndef f(k):\r\n b[k]=a[k]\r\n\r\nwith ThreadPool(32) as p:\r\n keys = [key for key in a.keys() if key and not key.endswith(\"/\")] # ignore root and directories\r\n for _ in tqdm(p.imap_unordered(f, keys), total=len(keys)):\r\n pass\r\n```"
] | 2022-11-22T14:00:10
| 2024-11-15T15:03:41
| null |
MEMBER
| null | null | null | null |
Would be nice to be able to do
```python
data_files=["s3://..."] # or gs:// or any cloud storage path
storage_options = {...}
load_dataset(..., data_files=data_files, storage_options=storage_options)
```
The idea would be to use `fsspec` as in `download_and_prepare` and `save_to_disk`.
This has been requested several times already. Some users want to use their data from private cloud storage to train models
related:
https://github.com/huggingface/datasets/issues/3490
https://github.com/huggingface/datasets/issues/5244
[forum](https://discuss.huggingface.co/t/how-to-use-s3-path-with-load-dataset-with-streaming-true/25739/2)
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Import error
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[
"Hi ! Can you \r\n```python\r\nimport platform\r\nprint(platform.python_version())\r\n```\r\nto see that it returns ?",
"Hi,\n\n3.8.13\n\nGet Outlook for Android<https://aka.ms/AAb9ysg>\n________________________________\nFrom: Quentin Lhoest ***@***.***>\nSent: Tuesday, November 22, 2022 2:37:02 PM\nTo: huggingface/datasets ***@***.***>\nCc: feketedavid1012 ***@***.***>; Author ***@***.***>\nSubject: Re: [huggingface/datasets] Import error (Issue #5280)\n\n\nHi ! Can you\n\nimport platform\nprint(platform.python_version())\n\nto see that it returns ?\n\n—\nReply to this email directly, view it on GitHub<https://github.com/huggingface/datasets/issues/5280#issuecomment-1323691385>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AJW7F5YGG32W6WABYC25NJTWJTD75ANCNFSM6AAAAAASHZJ2AU>.\nYou are receiving this because you authored the thread.Message ID: ***@***.***>\n",
"Then it should work as expected if you use the same python when using `datasets`\r\n\r\nPlease make sure you're running your code in the right environment",
"It's the right environment. But in if statement I have\n\"3.8.13\" < 3.7\nAnd in the error message is Python>=3.7 which is true in my case (3.8.13 is greater then 3.7), so I don't understand my python should be below the 3.7 which case the if statement is right, but the message is wrong, or above 3.7 which case if statement is wrong, error message is right.\n\nGet Outlook for Android<https://aka.ms/AAb9ysg>\n________________________________\nFrom: Quentin Lhoest ***@***.***>\nSent: Tuesday, November 22, 2022 2:41:43 PM\nTo: huggingface/datasets ***@***.***>\nCc: feketedavid1012 ***@***.***>; Author ***@***.***>\nSubject: Re: [huggingface/datasets] Import error (Issue #5280)\n\n\nThen it should work as expected if you use the same python when using datasets\n\nPlease make sure you're running your code in the right environment\n\n—\nReply to this email directly, view it on GitHub<https://github.com/huggingface/datasets/issues/5280#issuecomment-1323697094>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AJW7F54JURTAJJWWDO2QGI3WJTERPANCNFSM6AAAAAASHZJ2AU>.\nYou are receiving this because you authored the thread.Message ID: ***@***.***>\n",
"If you're having an error then you're not running your code in the right environment."
] | 2022-11-22T12:56:43
| 2022-12-15T19:57:40
| 2022-12-15T19:57:40
|
NONE
| null | null | null | null |
https://github.com/huggingface/datasets/blob/cd3d8e637cfab62d352a3f4e5e60e96597b5f0e9/src/datasets/__init__.py#L28
Hy,
I have error at the above line. I have python version 3.8.13, the message says I need python>=3.7, which is True, but I think the if statement not working properly (or the message wrong)
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load_dataset does not read jsonl metadata file properly
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[
"Can you try to remove \"drop_labels=false\" ? It may force the loader to infer the labels instead of reading the metadata",
"Hi, thanks for responding. I tried that, but it does not change anything.",
"Can you try updating `datasets` ? Metadata support was added in `datasets` 2.4",
"Probably the issue, will report back asap!",
"Okay, now it seems to actually load the metadata and create the train_split, but it still says only returns \"image\" and \"label\", which is always 0 since all images are from same folder",
"> Can you try updating `datasets` ? Metadata support was added in `datasets` 2.4\r\n\r\nUpdate: This was the issue."
] | 2022-11-22T10:24:46
| 2023-02-14T14:48:16
| 2022-11-23T11:38:35
|
NONE
| null | null | null | null |
### Describe the bug
Hi, I'm following [this page](https://huggingface.co/docs/datasets/image_dataset) to create a dataset of images and captions via an image folder and a metadata.json file, but I can't seem to get the dataloader to recognize the "text" column. It just spits out "image" and "label" as features.
Below is code to reproduce my exact example/problem.
### Steps to reproduce the bug
```ruby
dataset_link="19Unu89Ih_kP6zsE7f9Mkw8dy3NwHopRF"
id = dataset_link
output = 'Godardv01.zip'
gdown.download(id=id, output=output, quiet=False)
ds = load_dataset("imagefolder", data_dir="/kaggle/working/Volumes/TOSHIBA/Godard_imgs/Volumes/TOSHIBA/Godard_imgs/Full/train", split="train", drop_labels=False)
print(ds)
```
### Expected behavior
I would expect that it returned "image" and "text" columns from the code above.
### Environment info
- `datasets` version: 2.1.0
- Platform: Linux-5.15.65+-x86_64-with-debian-bullseye-sid
- Python version: 3.7.12
- PyArrow version: 5.0.0
- Pandas version: 1.3.5
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I_kwDODunzps5W_B5y
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|
Bug in downloading common_voice data and snall chunk of it to one's own hub
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[
"Sounds like one of the file is not a valid one, can you make sure you uploaded valid mp3 files ?",
"Well I just sharded the original commonVoice dataset and pushed a small chunk of it in a private rep\n\nWhat did go wrong?\n\nHolen Sie sich Outlook für iOS<https://aka.ms/o0ukef>\n________________________________\nVon: Quentin Lhoest ***@***.***>\nGesendet: Tuesday, November 22, 2022 3:03:40 PM\nAn: huggingface/datasets ***@***.***>\nCc: capsabogdan ***@***.***>; Author ***@***.***>\nBetreff: Re: [huggingface/datasets] Bug in downloading common_voice data and snall chunk of it to one's own hub (Issue #5276)\n\n\nSounds like one of the file is not a valid one, can you make sure you uploaded valid mp3 files ?\n\n—\nReply to this email directly, view it on GitHub<https://github.com/huggingface/datasets/issues/5276#issuecomment-1323727434>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ALSIFOAPAL2V4TBJTSPMAULWJTHDZANCNFSM6AAAAAASHQJ63U>.\nYou are receiving this because you authored the thread.Message ID: ***@***.***>\n",
"It should be all good then !\r\nCould you share a link to your repository for me to investigate what went wrong ?",
"https://huggingface.co/datasets/DTU54DL/common-voice-test16k\n\nAm Di., 22. Nov. 2022 um 16:43 Uhr schrieb Quentin Lhoest <\n***@***.***>:\n\n> It should be all good then !\n> Could you share a link to your repository for me to investigate what went\n> wrong ?\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5276#issuecomment-1323876682>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/ALSIFOEUJRZWXAM7DYA5VJDWJTS3NANCNFSM6AAAAAASHQJ63U>\n> .\n> You are receiving this because you authored the thread.Message ID:\n> ***@***.***>\n>\n",
"I see ! This is a bug with MP3 files.\r\n\r\nWhen we store audio data in parquet, we store the bytes and the file name. From the file name extension we know if it's a WAV, an MP3 or else. But here it looks like the paths are all None.\r\n\r\nIt looks like it comes from here:\r\n\r\nhttps://github.com/huggingface/datasets/blob/7feeb5648a63b6135a8259dedc3b1e19185ee4c7/src/datasets/features/audio.py#L212\r\n\r\nCc @polinaeterna maybe we should simply put the file name instead of None values ?",
"@lhoestq I remember we wanted to avoid storing redundant data but maybe it's not that crucial indeed to store one more string value. \r\nOr we can store paths only for mp3s, considering that for other formats we don't have such a problem with reading from bytes without format specified. ",
"It doesn't cost much to always store the file name IMO",
"thanks for the help!\n\ncan I do anything on my side? we are doing a DL project and we need the\ndata really quick.\n\nthanks\nbogdan\n\n> Message ID: ***@***.***>\n>\n",
"I opened a pull requests here: https://github.com/huggingface/datasets/pull/5285, we'll do a new release soon with this fix.\r\n\r\nOtherwise if you're really in a hurry you can install `datasets` from this PR",
"[image: image.png]\n\n> Message ID: ***@***.***>\n>\n",
"any idea on what's going wrong here?\n\nthanks\n\nAm So., 27. Nov. 2022 um 13:53 Uhr schrieb Bogdan Capsa <\n***@***.***>:\n\n> [image: image.png]\n>\n>> Message ID: ***@***.***>\n>>\n>\n",
"hi @capsabogdan! \r\ncould you please share more specifically what problem do you have now?",
"I have attached this screenshot above . can u pls help? So can not pip from pull request\r\n\r\n\r\n",
"The pull request has been merged on `main`.\r\nYou can install `datasets` from `main` using\r\n```\r\npip install git+https://github.com/huggingface/datasets.git\r\n```",
"I've tried to load this dataset DTU54DL/common-voice-test16k, but am\ngetting the same error.\n\nSo the bug fix will fix only if I upload a new dataset, or also loading\npreviously uploaded datasets?\n\nthanks\n\nAm Mo., 28. Nov. 2022 um 19:51 Uhr schrieb Quentin Lhoest <\n***@***.***>:\n\n> The pull request has been merged on main.\n> You can install datasets from main using\n>\n> pip install git+https://github.com/huggingface/datasets.git\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5276#issuecomment-1329587334>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/ALSIFOCNYYIGHM2EX3ZIO6DWKT5MXANCNFSM6AAAAAASHQJ63U>\n> .\n> You are receiving this because you were mentioned.Message ID:\n> ***@***.***>\n>\n",
"> So the bug fix will fix only if I upload a new dataset, or also loading\r\npreviously uploaded datasets?\r\n\r\nYou have to reupload the dataset, sorry for the inconvenience",
"thank you so much for the help! works like a charm!\n\nAm Di., 29. Nov. 2022 um 12:15 Uhr schrieb Quentin Lhoest <\n***@***.***>:\n\n> So the bug fix will fix only if I upload a new dataset, or also loading\n> previously uploaded datasets?\n>\n> You have to reupload the dataset, sorry for the inconvenience\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5276#issuecomment-1330468393>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/ALSIFOBKEFZO57BAKY4IGW3WKXQUZANCNFSM6AAAAAASHQJ63U>\n> .\n> You are receiving this because you were mentioned.Message ID:\n> ***@***.***>\n>\n"
] | 2022-11-22T08:17:53
| 2023-07-21T14:33:10
| 2023-07-21T14:33:10
|
NONE
| null | null | null | null |
### Describe the bug
I'm trying to load the common voice dataset. Currently there is no implementation to download just par tof the data, and I need just one part of it, without downloading the entire dataset
Help please?
### Steps to reproduce the bug
So here is what I have done:
1. Download common_voice data
2. Trim part of it and publish it to my own repo.
3. Download data from my own repo, but am getting this error.
### Expected behavior
There shouldn't be an error in downloading part of the data and publishing it to one's own repo
### Environment info
common_voice 11
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I_kwDODunzps5W_AzH
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YAML integer keys are not preserved Hub server-side
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[
"@huggingface/datasets if you agree, I can make the bulk edit on the Hub to fix integer keys into strings.",
"Ok for me, and we can merge (internal) https://github.com/huggingface/moon-landing/pull/4609",
"FYI there are still 2k+ weekly users on `datasets` 2.6.1 which doesn't support the string label format for class labels. And among those, some are using datasets with class labels like imdb (60 users), conllpp (40), msra_ner (40), peoples_daily_enr (40), weibo_ner (30), conll2003 (20), etc. And renaming to string would break these users code.",
"but isn't `datasets 2.6.1` downloading files from the Hub with the corresponding tag? I thought we had something like this before",
"We're using `main` as models do. Some datasets need to be updated from time to time, e.g. when a link to download the data is dead.\r\n\r\nBut yea a year ago we had those tags, we just ended up not using them",
"I opened https://github.com/huggingface/datasets/issues/5406 to communicate on this. Let me know what you think, and if it sounds good to you I can pin this issue",
"So, is it OK to make the bulk edit on the Hub now or should we wait longer? If the latter, how long?",
"I think we can do it. If you want to be extra cautious you can do it for all datasets except imdb and conllpp for now which are actively used by 2.6.1 users. For those two we can keep the YAML like this for some more time, or alternatively use the old dataset_infos.json file",
"The bulk edit of canonical datasets (except imdb and conllpp) is running. \r\n\r\nSee e.g.: https://huggingface.co/datasets/acronym_identification/discussions/3\r\n\r\nEDITED: \r\nDone, except for \"universal_morphologies\", where I get\r\n```\r\nHTTPError: 413 Client Error: Payload Too Large for url: https://huggingface.co/api/validate-yaml\r\n```\r\n\r\nAlso not done for the datasets missing matadata \"dataset_info\":\r\n- mc4: https://huggingface.co/datasets/mc4/discussions/3\r\n- the_pile: https://huggingface.co/datasets/the_pile/discussions/6\r\n- timit_asr: https://huggingface.co/datasets/timit_asr/discussions/1",
"Thank you !",
"@lhoestq, there are 6 community datasets with YAML integer keys in their `dataset_info` `class_label`:\r\n- indonlp/indonlu\r\n- rcds/swiss_judgment_prediction\r\n- Jean-Baptiste/wikiner_fr\r\n- Bingsu/Cat_and_Dog\r\n- taskydata/tasky_or_not\r\n- RCC-MSU/collection3\r\n\r\nMaybe we could open a PR on them as well?",
"Let's do this then:\r\n\r\n- [x] [indonlp/indonlu](https://huggingface.co/datasets/indonlp/indonlu/discussions/3)\r\n- [x] rcds/swiss_judgment_prediction\r\n- [x] Jean-Baptiste/wikiner_fr\r\n- [x] Bingsu/Cat_and_Dog -> merged\r\n- [x] taskydata/tasky_or_not (was already using quotes)\r\n- [x] RCC-MSU/collection3\r\n\r\nEDIT: all done :)",
"@lhoestq I was not asking you to do it, but asking if you agree me to do it... :man_facepalming: \r\nAs I self-assigned this issue... :sweat_smile: "
] | 2022-11-22T08:14:47
| 2023-01-26T10:52:35
| 2023-01-26T10:40:21
|
MEMBER
| null | null | null | null |
After an internal discussion (https://github.com/huggingface/moon-landing/issues/4563):
- YAML integer keys are not preserved server-side: they are transformed to strings
- See for example this Hub PR: https://huggingface.co/datasets/acronym_identification/discussions/1/files
- Original:
```yaml
class_label:
names:
0: B-long
1: B-short
```
- Returned by the server:
```yaml
class_label:
names:
'0': B-long
'1': B-short
```
- They are planning to enforce only string keys
- Other projects already use interger-transformed-to string keys: e.g. `transformers` models `id2label`: https://huggingface.co/roberta-large-mnli/blob/main/config.json
```yaml
"id2label": {
"0": "CONTRADICTION",
"1": "NEUTRAL",
"2": "ENTAILMENT"
}
```
On the other hand, at `datasets` we are currently using YAML integer keys for `dataset_info` `class_label`.
Please note (thanks @lhoestq for pointing out) that previous versions (2.6 and 2.7) of `datasets` need being patched:
```python
In [18]: Features._from_yaml_list([{'dtype': {'class_label': {'names': {'0': 'neg', '1': 'pos'}}}, 'name': 'label'}])
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-18-974f07eea526> in <module>
----> 1 Features._from_yaml_list(ry)
~/Desktop/hf/nlp/src/datasets/features/features.py in _from_yaml_list(cls, yaml_data)
1743 raise TypeError(f"Expected a dict or a list but got {type(obj)}: {obj}")
1744
-> 1745 return cls.from_dict(from_yaml_inner(yaml_data))
1746
1747 def encode_example(self, example):
~/Desktop/hf/nlp/src/datasets/features/features.py in from_yaml_inner(obj)
1739 elif isinstance(obj, list):
1740 names = [_feature.pop("name") for _feature in obj]
-> 1741 return {name: from_yaml_inner(_feature) for name, _feature in zip(names, obj)}
1742 else:
1743 raise TypeError(f"Expected a dict or a list but got {type(obj)}: {obj}")
~/Desktop/hf/nlp/src/datasets/features/features.py in <dictcomp>(.0)
1739 elif isinstance(obj, list):
1740 names = [_feature.pop("name") for _feature in obj]
-> 1741 return {name: from_yaml_inner(_feature) for name, _feature in zip(names, obj)}
1742 else:
1743 raise TypeError(f"Expected a dict or a list but got {type(obj)}: {obj}")
~/Desktop/hf/nlp/src/datasets/features/features.py in from_yaml_inner(obj)
1734 return {"_type": snakecase_to_camelcase(obj["dtype"])}
1735 else:
-> 1736 return from_yaml_inner(obj["dtype"])
1737 else:
1738 return {"_type": snakecase_to_camelcase(_type), **unsimplify(obj)[_type]}
~/Desktop/hf/nlp/src/datasets/features/features.py in from_yaml_inner(obj)
1736 return from_yaml_inner(obj["dtype"])
1737 else:
-> 1738 return {"_type": snakecase_to_camelcase(_type), **unsimplify(obj)[_type]}
1739 elif isinstance(obj, list):
1740 names = [_feature.pop("name") for _feature in obj]
~/Desktop/hf/nlp/src/datasets/features/features.py in unsimplify(feature)
1704 if isinstance(feature.get("class_label"), dict) and isinstance(feature["class_label"].get("names"), dict):
1705 label_ids = sorted(feature["class_label"]["names"])
-> 1706 if label_ids and label_ids != list(range(label_ids[-1] + 1)):
1707 raise ValueError(
1708 f"ClassLabel expected a value for all label ids [0:{label_ids[-1] + 1}] but some ids are missing."
TypeError: can only concatenate str (not "int") to str
```
TODO:
- [x] Remove YAML integer keys from `dataset_info` metadata
- [x] Make a patch release for affected `datasets` versions: 2.6 and 2.7
- [x] Communicate on the fix
- [x] Wait for adoption
- [x] Bulk edit the Hub to fix this in all canonical datasets
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I_kwDODunzps5W8S23
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|
load_dataset possibly broken for gated datasets?
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[
"@BradleyHsu",
"Btw, thanks very much for finding the hub rollback temporary fix and bringing the issue to our attention @KhoomeiK!",
"I see the same issue when calling `load_dataset('poloclub/diffusiondb', 'large_random_1k')` with `datasets==2.7.1` and `huggingface-hub=0.11.0`. No issue with `datasets=2.6.1` and `huggingface_hub==0.10.1`.\r\n\r\nhttps://github.com/poloclub/diffusiondb/issues/7",
"I fixed my issue by specifying `repo_type` in `hf_hub_url()`. https://github.com/poloclub/diffusiondb/commit/9eb91c79aaca98b0515a0ce45778b8af65b84652\r\n\r\nI opened a PR on the Winoground's repo: https://huggingface.co/datasets/facebook/winoground/discussions/2",
"This is a bug in the script, indeed. The most robust fix is to use a relative path instead of `hf_hub_url`, which does not depend on `huggingface_hub`'s version 🙂. I've opened a PR here: https://huggingface.co/datasets/facebook/winoground/discussions/3.",
"Awesome, big thanks to both @xiaohk and @mariosasko!",
"so, if i reproduce the bug, what should i do ? with huggingface_hub0.13.3 dataset2.6.1",
"huggingface_hub.utils._validators.HFValidationError: Repo id must be in the form 'repo_name' or 'namespace/repo_name':\r\n\r\n tokenizer = AutoTokenizer.from_pretrained(ARGS.model_path, trust_remote_code=True)\r\n\r\nPlease handle automatically for local path and repo name inside, otherwise users always get confused about this",
"I think I'm also hitting this error, trying to load a model from a local path."
] | 2022-11-21T21:59:53
| 2023-05-27T00:06:14
| 2022-11-28T02:50:42
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
When trying to download the [winoground dataset](https://huggingface.co/datasets/facebook/winoground), I get this error unless I roll back the version of huggingface-hub:
```
[/usr/local/lib/python3.7/dist-packages/huggingface_hub/utils/_validators.py](https://localhost:8080/#) in validate_repo_id(repo_id)
165 if repo_id.count("/") > 1:
166 raise HFValidationError(
--> 167 "Repo id must be in the form 'repo_name' or 'namespace/repo_name':"
168 f" '{repo_id}'. Use `repo_type` argument if needed."
169 )
HFValidationError: Repo id must be in the form 'repo_name' or 'namespace/repo_name': 'datasets/facebook/winoground'. Use `repo_type` argument if needed
```
### Steps to reproduce the bug
Install requirements:
```
pip install transformers
pip install datasets
# It works if you uncomment the following line, rolling back huggingface hub:
# pip install huggingface-hub==0.10.1
```
Then:
```
from datasets import load_dataset
auth_token = "" # Replace with an auth token, which you can get from your huggingface account: Profile -> Settings -> Access Tokens -> New Token
winoground = load_dataset("facebook/winoground", use_auth_token=auth_token)["test"]
```
### Expected behavior
Downloading of the datset
### Environment info
Just a google colab; see here: https://colab.research.google.com/drive/15wwOSte2CjTazdnCWYUm2VPlFbk2NGc0?usp=sharing
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download_mode="force_redownload" does not refresh cached dataset
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| 2022-11-21T14:13:03
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NONE
| null | null | null | null |
### Describe the bug
`load_datasets` does not refresh dataset when features are imported from external file, even with `download_mode="force_redownload"`. The bug is not limited to nested fields, however it is more likely to occur with nested fields.
### Steps to reproduce the bug
To reproduce the bug 3 files are needed: `dataset.py` (contains dataset loading script), `schema.py` (contains features of dataset) and `main.py` (to run `load_datasets`)
`dataset.py`
```python
import datasets
from schema import features
class NewDataset(datasets.GeneratorBasedBuilder):
def _info(self):
return datasets.DatasetInfo(
features=features
)
def _split_generators(self, dl_manager):
return [
datasets.SplitGenerator(
name=datasets.Split.TRAIN
)
]
def _generate_examples(self):
data = [
{"id": 0, "nested": []},
{"id": 1, "nested": []}
]
for key, example in enumerate(data):
yield key, example
```
`schema.py`
```python
import datasets
features = datasets.Features(
{
"id": datasets.Value("int32"),
"nested": [
{"text": datasets.Value("string")}
]
}
)
```
`main.py`
```python
import datasets
a = datasets.load_dataset("dataset.py")
print(a["train"].info.features)
```
Now if `main.py` is run it prints the following correct output: `{'id': Value(dtype='int32', id=None), 'nested': [{'text': Value(dtype='string', id=None)}]}`. However, if f.e. the label of the feature "text" is changed to something else, f.e. to
`schema.py`
```python
import datasets
features = datasets.Features(
{
"id": datasets.Value("int32"),
"nested": [
{"textfoo": datasets.Value("string")}
]
}
)
```
`main.py` still prints `{'id': Value(dtype='int32', id=None), 'nested': [{'text': Value(dtype='string', id=None)}]}`, even if run with `download_mode="force_redownload"`. The only fix is to delete the folder in the cache.
### Expected behavior
The cached dataset is deleted and refreshed when using `load_datasets` with `download_mode="force_redownload"`.
### Environment info
- `datasets` version: 2.7.0
- Platform: Windows-10-10.0.19041-SP0
- Python version: 3.7.9
- PyArrow version: 10.0.0
- Pandas version: 1.3.5
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Use pyarrow Tensor dtype
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"Hi ! We're using the Arrow format for the datasets, and PyArrow tensors are not part of the Arrow format AFAIK:\r\n\r\n> There is no direct support in the arrow columnar format to store Tensors as column values.\r\n\r\nsource: https://github.com/apache/arrow/issues/4802#issuecomment-508494694",
"@wesm @rok its been around three years. any updates, regarding dataset arrow tensor support? 🙏 I know you must be very busy, would appreciate to learn what is the state of art. I saw the PR is still open [#8510](https://github.com/apache/arrow/pull/8510)",
"Hey @franz101 & @lhoestq!\r\nThere is a plan and a PR to create an [ExtensionArray of Tensors](https://github.com/apache/arrow/pull/8510) of equal sizes as well as a plan to do the same for Tensors of different sizes [ARROW-8714](https://issues.apache.org/jira/browse/ARROW-8714).",
"The work stalled a little because it was not clear where TensorArray would live. However Arrow community recently agreed to make a [well-known-extension-type document](https://lists.apache.org/thread/sxd5fhc42hb6svs79t3fd79gkqj83pfh) and I would like https://github.com/apache/arrow/pull/8510 to land there and add an implementation to C++/Python + another language. Is that something you would find beneficial to you?",
"that is a great update, thank you.\r\nit looks like this feature would benefit datasets implementation of [ArrayExtensionArray](https://github.com/huggingface/datasets/blob/9f2ff14673cac1f1ad56d80221a793f5938b68c7/src/datasets/features/features.py#L585-L641). Is that correct @eladsegal @lhoestq?\r\n\r\n",
"TensorArray sounds great ! Looking forward to it :)\r\n\r\nWe've had our own ExtensionArray for fixed shape tensors for a while now, hoping to see something more standardized by the arrow community.\r\n\r\nAlso super interested in the extension array for tensors of different sizes cc @mariosasko ",
"[FixedShapeTensor ExtensionType](https://github.com/apache/arrow/pull/8510) was merged and will be in Arrow 12.0.0 (release is planned mid April).\r\n",
"@rok Thanks for keeping us updated! I think it's best to introduce a new feature type that would use this extension type under the hood. I'll create an issue to discuss the design with the community in the coming days.\r\n\r\nAlso, is there a tentative time frame for the variable-shape Tensor extension type?",
"@mariosasko please tag me in the discussion, perhaps I can contribute.\r\n\r\nAs for the [variable shape tensor array](https://github.com/apache/arrow/issues/24868) - I'd be interested in working on it but didn't see much interest in community yet. Are you saying `huggingface/datasets` could use it?",
"pyarrow 12 is out 🎉, will have a look if I can work on it for the ExtensionArray",
"I think these two issues need to be fixed first on the Arrow side before adding the tensor feature type here: https://github.com/apache/arrow/issues/35573 and https://github.com/apache/arrow/issues/35599.\r\n\r\n@rok We've had a couple of requests for supporting variable-shape tensors on the forum/GH, but I did not manage to find the concrete issues using the search. TF/TFDS (and PyTorch with the `nested_tensor` API) support them, so it makes sense for us to do the same eventually (the Ray project has an [extension](https://github.com/ray-project/ray/blob/42a8d1489b37243f203120899a23d919dc85bf2a/python/ray/air/util/tensor_extensions/arrow.py#L634) type to support this case)",
"> @rok We've had a couple of requests for supporting variable-shape tensors on the forum/GH, but I did not manage to find the concrete issues using the search. TF/TFDS (and PyTorch with the `nested_tensor` API) support them, so it makes sense for us to do the same eventually (the Ray project has an [extension](https://github.com/ray-project/ray/blob/42a8d1489b37243f203120899a23d919dc85bf2a/python/ray/air/util/tensor_extensions/arrow.py#L634) type to support this case)\r\n\r\nThat does make sense indeed. We should probably also be careful about memory layout to enable zero-copy interface to TF/PyTorch.",
"So there is no way we can use [pyarrow.Tensor](https://arrow.apache.org/docs/python/generated/pyarrow.Tensor.html#pyarrow.Tensor) ?",
"Not with with the Arrow format, and therefore not in `datasets`. But they released a new [FixedShapeTensorArray](https://arrow.apache.org/docs/python/extending_types.html#fixed-size-tensor) to store tensors in Arrow format. We plan to support this in `datasets` at one point !",
"There is also an open issue to enable the conversion of `pyarrow.Tensor` to `pyarrow.FixedShapeTensorType`: https://github.com/apache/arrow/issues/35068. This way one could indirectly use `pyarrow.Tensor` in Arrow format.",
"We started a [mailing list discussion](https://lists.apache.org/thread/qc9qho0fg5ph1dns4hjq56hp4tj7rk1k) about potential `VariableShapeTensor` extension array, please check it out and give feedback. For more details here's also a PR https://github.com/apache/arrow/pull/37166.",
"Kindly ask what's the recent progress?"
] | 2022-11-20T15:18:41
| 2024-11-11T03:03:17
| null |
NONE
| null | null | null | null |
### Feature request
I was going the discussion of converting tensors to lists.
Is there a way to leverage pyarrow's Tensors for nested arrays / embeddings?
For example:
```python
import pyarrow as pa
import numpy as np
x = np.array([[2, 2, 4], [4, 5, 100]], np.int32)
pa.Tensor.from_numpy(x, dim_names=["dim1","dim2"])
```
[Apache docs](https://arrow.apache.org/docs/python/generated/pyarrow.Tensor.html)
Maybe this belongs into the pyarrow features / repo.
### Motivation
Working with big data, we need to make sure to use the best data structures and IO out there
### Your contribution
Can try to a PR if code changes necessary
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When len(_URLS) > 16, download will hang
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[
"It can fix the bug temporarily.\r\n```python\r\nfrom datasets import DownloadConfig\r\nconfig = DownloadConfig(num_proc=8)\r\nIn [5]: dataset = load_dataset('Freed-Wu/kodak', split='test', download_config=config)\r\nDownloading and preparing dataset kodak/default to /home/wzy/.cache/huggingface/datasets/Freed-Wu___kodak/default/0.0.1/6cf51f2b3d686d24a33fe86945f9e16802def212325f9345cf3cbb1b9f5f4a57...\r\nDownloading data files #4: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.39obj/s]\r\nDownloading data files #2: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.38obj/s]\r\nDownloading data files #3: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.13obj/s]\r\nDownloading data files #7: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.09obj/s]\r\nDownloading data files #5: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.08obj/s]\r\nDownloading data files #0: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:02<00:00, 1.08obj/s]\r\nDownloading data files #1: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:10<00:00, 3.36s/obj]\r\nDownloading data: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 492k/492k [00:01<00:00, 253kB/s]\r\nDownloading data files #6: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:13<00:00, 4.63s/obj]\r\nExtracting data files #0: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1407.17obj/s]\r\nExtracting data files #1: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1325.91obj/s]\r\nExtracting data files #3: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1524.46obj/s]\r\nExtracting data files #2: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1404.66obj/s]\r\nExtracting data files #4: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1538.63obj/s]\r\nExtracting data files #6: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1711.73obj/s]\r\nExtracting data files #7: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 2144.33obj/s]\r\nExtracting data files #5: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 1964.85obj/s]\r\nDataset kodak downloaded and prepared to /home/wzy/.cache/huggingface/datasets/Freed-Wu___kodak/default/0.0.1/6cf51f2b3d686d24a33fe86945f9e16802def212325f9345cf3cbb1b9f5f4a57. Subsequent calls will reuse this data.\r\n```",
"Thanks for reporting ! This sounds like an issue with python multiprocessing. If we switch to multithreading for the downloads it should be much more robust - let me know if this is something you'd like to contribute, I'd be happy to help and give you some pointers",
"> an issue with python multiprocessing\r\n\r\nIf it is an issue with multiprocessing, should we report it to upstream?",
"Debugging this would require quite some work in my opinion, and I've often failed to make reproducible examples, since it's pretty correlated to one's environment + hardware. So I wouldn't spend too much time on this unless we manage to reproduce this on another machine consistently.\r\n\r\nInstead I'd encourage a more pragmatic fix that is: not create tons of processes (on regular machines it may slow things down anyway), and instead use multithreading by default.",
"I am not expert of python. I hear about python has GIL, which result in multi processing is worse than multi threading. So I am not sure if this change makes sense?\r\n\r\nAnd if this is a bug of multi processing, why not report to upstream and let them fix? And even if change it to multi threading, how can we make sure it can truly fix this problem?",
"Just my 2c. No offense.",
"> Just my 2c. No offense.\r\n\r\nsure np ^^\r\n\r\n> I hear about python has GIL, which result in multi processing is worse than multi threading. So I am not sure if this change makes sense?\r\n\r\nHere the bottleneck speed is the bandwidth used to download the files. When downloading, the GIL is released, so multithreading gives the same speed as multiprocessing.\r\n\r\n> And if this is a bug of multi processing, why not report to upstream and let them fix?\r\n\r\nUsually to fix a bug it's important to be able to reproduce it. This way you can share it, experiment with it, and then make sure it's fixed. Here I'm afraid it's not easy to reproduce. Though I think that spawning too many processes for your machine can lead to this kind of issues.\r\n\r\n> And even if change it to multi threading, how can we make sure it can truly fix this problem?\r\n\r\nMultithreading is more robust in python because IIRC there are less locks involved which are often the cause of code hanging for no reason."
] | 2022-11-19T14:27:41
| 2022-11-21T15:27:16
| null |
NONE
| null | null | null | null |
### Describe the bug
```python
In [9]: dataset = load_dataset('Freed-Wu/kodak', split='test')
Downloading: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2.53k/2.53k [00:00<00:00, 1.88MB/s]
[11/19/22 22:16:21] WARNING Using custom data configuration default builder.py:379
Downloading and preparing dataset kodak/default to /home/wzy/.cache/huggingface/datasets/Freed-Wu___kodak/default/0.0.1/bd1cc3434212e3e654f7e16ad618f8a1470b5982b086c91b1d6bc7187183c6e9...
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 531k/531k [00:02<00:00, 239kB/s]
#10: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.06s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 534k/534k [00:02<00:00, 193kB/s]
#14: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.37s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 692k/692k [00:02<00:00, 269kB/s]
#12: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.44s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 566k/566k [00:02<00:00, 210kB/s]
#5: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.53s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 613k/613k [00:02<00:00, 235kB/s]
#13: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.53s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 786k/786k [00:02<00:00, 342kB/s]
#3: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.60s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 619k/619k [00:02<00:00, 254kB/s]
#4: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.68s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 737k/737k [00:02<00:00, 271kB/s]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 788k/788k [00:02<00:00, 285kB/s]
#6: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:05<00:00, 5.04s/obj]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 618k/618k [00:04<00:00, 153kB/s]
#0: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:11<00:00, 5.69s/obj]
^CProcess ForkPoolWorker-47:
Process ForkPoolWorker-46:
Process ForkPoolWorker-36:
Process ForkPoolWorker-38:██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:05<00:00, 5.04s/obj]
Process ForkPoolWorker-37:
Process ForkPoolWorker-45:
Process ForkPoolWorker-39:
Process ForkPoolWorker-43:
Process ForkPoolWorker-33:
Process ForkPoolWorker-18:
Traceback (most recent call last):
Traceback (most recent call last):
Traceback (most recent call last):
Traceback (most recent call last):
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
Traceback (most recent call last):
Traceback (most recent call last):
Traceback (most recent call last):
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/queues.py", line 365, in get
res = self._reader.recv_bytes()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
File "/usr/lib/python3.10/multiprocessing/connection.py", line 221, in recv_bytes
buf = self._recv_bytes(maxlength)
KeyboardInterrupt
KeyboardInterrupt
File "/usr/lib/python3.10/multiprocessing/connection.py", line 419, in _recv_bytes
buf = self._recv(4)
File "/usr/lib/python3.10/multiprocessing/connection.py", line 384, in _recv
chunk = read(handle, remaining)
KeyboardInterrupt
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 114, in worker
task = get()
File "/usr/lib/python3.10/multiprocessing/queues.py", line 364, in get
with self._rlock:
File "/usr/lib/python3.10/multiprocessing/synchronize.py", line 95, in __enter__
return self._semlock.__enter__()
KeyboardInterrupt
Process ForkPoolWorker-20:
Process ForkPoolWorker-44:
Process ForkPoolWorker-22:
Traceback (most recent call last):
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 85, in create_connection
sock.connect(sa)
ConnectionRefusedError: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/usr/lib/python3.10/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 197, in _single_map_nested
return function(data_struct)
File "/usr/lib/python3.10/site-packages/datasets/utils/download_manager.py", line 217, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 561, in get_from_cache
response = http_head(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 476, in http_head
response = _request_with_retry(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 405, in _request_with_retry
response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
File "/usr/lib/python3.10/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 386, in _make_request
self._validate_conn(conn)
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1042, in _validate_conn
conn.connect()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 358, in connect
self.sock = conn = self._new_conn()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 174, in _new_conn
conn = connection.create_connection(
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 85, in create_connection
sock.connect(sa)
KeyboardInterrupt
#1: 0%| | 0/2 [03:00<?, ?obj/s]
Traceback (most recent call last):
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/usr/lib/python3.10/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 197, in _single_map_nested
return function(data_struct)
File "/usr/lib/python3.10/site-packages/datasets/utils/download_manager.py", line 217, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 659, in get_from_cache
http_get(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 442, in http_get
response = _request_with_retry(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 405, in _request_with_retry
response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
File "/usr/lib/python3.10/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 386, in _make_request
self._validate_conn(conn)
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1042, in _validate_conn
conn.connect()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 358, in connect
self.sock = conn = self._new_conn()
File "/usr/lib/python3.10/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 174, in _new_conn
conn = connection.create_connection(
File "/usr/lib/python3.10/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 72, in create_connection
for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/socket.py", line 955, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 197, in _single_map_nested
return function(data_struct)
File "/usr/lib/python3.10/site-packages/datasets/utils/download_manager.py", line 217, in _download
return cached_path(url_or_filename, download_config=download_config)
KeyboardInterrupt
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 561, in get_from_cache
response = http_head(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 476, in http_head
response = _request_with_retry(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 405, in _request_with_retry
response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
File "/usr/lib/python3.10/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 386, in _make_request
self._validate_conn(conn)
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1042, in _validate_conn
conn.connect()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 358, in connect
self.sock = conn = self._new_conn()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 174, in _new_conn
conn = connection.create_connection(
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 72, in create_connection
for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):
File "/usr/lib/python3.10/socket.py", line 955, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
KeyboardInterrupt
#3: 0%| | 0/2 [03:00<?, ?obj/s]
#11: 0%| | 0/1 [00:49<?, ?obj/s]
Traceback (most recent call last):
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 85, in create_connection
sock.connect(sa)
ConnectionRefusedError: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/usr/lib/python3.10/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 197, in _single_map_nested
return function(data_struct)
File "/usr/lib/python3.10/site-packages/datasets/utils/download_manager.py", line 217, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 561, in get_from_cache
response = http_head(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 476, in http_head
response = _request_with_retry(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 405, in _request_with_retry
response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
File "/usr/lib/python3.10/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 723, in send
history = [resp for resp in gen]
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 723, in <listcomp>
history = [resp for resp in gen]
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 266, in resolve_redirects
resp = self.send(
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 386, in _make_request
self._validate_conn(conn)
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1042, in _validate_conn
conn.connect()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 358, in connect
self.sock = conn = self._new_conn()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 174, in _new_conn
conn = connection.create_connection(
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 85, in create_connection
sock.connect(sa)
KeyboardInterrupt
#5: 0%| | 0/1 [03:00<?, ?obj/s]
KeyboardInterrupt
Process ForkPoolWorker-42:
Traceback (most recent call last):
File "/usr/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/usr/lib/python3.10/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/usr/lib/python3.10/multiprocessing/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "/usr/lib/python3.10/multiprocessing/pool.py", line 48, in mapstar
return list(map(*args))
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 215, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/usr/lib/python3.10/site-packages/datasets/utils/py_utils.py", line 197, in _single_map_nested
return function(data_struct)
File "/usr/lib/python3.10/site-packages/datasets/utils/download_manager.py", line 217, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 561, in get_from_cache
response = http_head(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 476, in http_head
response = _request_with_retry(
File "/usr/lib/python3.10/site-packages/datasets/utils/file_utils.py", line 405, in _request_with_retry
response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
File "/usr/lib/python3.10/site-packages/requests/api.py", line 59, in request
return session.request(method=method, url=url, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 587, in request
resp = self.send(prep, **send_kwargs)
File "/usr/lib/python3.10/site-packages/requests/sessions.py", line 701, in send
r = adapter.send(request, **kwargs)
File "/usr/lib/python3.10/site-packages/requests/adapters.py", line 489, in send
resp = conn.urlopen(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 703, in urlopen
httplib_response = self._make_request(
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 386, in _make_request
self._validate_conn(conn)
File "/usr/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1042, in _validate_conn
conn.connect()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 358, in connect
self.sock = conn = self._new_conn()
File "/usr/lib/python3.10/site-packages/urllib3/connection.py", line 174, in _new_conn
conn = connection.create_connection(
File "/usr/lib/python3.10/site-packages/urllib3/util/connection.py", line 72, in create_connection
for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):
File "/usr/lib/python3.10/socket.py", line 955, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
KeyboardInterrupt
#9: 0%| | 0/1 [00:51<?, ?obj/s]
```
### Steps to reproduce the bug
```python
"""Kodak.
Copyright 2020 The HuggingFace Datasets Authors and the current dataset script contributor.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
"""
import datasets
NUMBER = 17
_DESCRIPTION = """\
The pictures below link to lossless, true color (24 bits per pixel, aka "full
color") images. It is my understanding they have been released by the Eastman
Kodak Company for unrestricted usage. Many sites use them as a standard test
suite for compression testing, etc. Prior to this site, they were only
available in the Sun Raster format via ftp. This meant that the images could
not be previewed before downloading. Since their release, however, the lossless
PNG format has been incorporated into all the major browsers. Since PNG
supports 24-bit lossless color (which GIF and JPEG do not), it is now possible
to offer this browser-friendly access to the images.
"""
_HOMEPAGE = "https://r0k.us/graphics/kodak/"
_LICENSE = "GPLv3"
_URLS = [
f"https://github.com/MohamedBakrAli/Kodak-Lossless-True-Color-Image-Suite/raw/master/PhotoCD_PCD0992/{i}.png"
for i in range(1, 1 + NUMBER)
]
class Kodak(datasets.GeneratorBasedBuilder):
"""Kodak datasets."""
VERSION = datasets.Version("0.0.1")
def _info(self):
features = datasets.Features(
{
"image": datasets.Image(),
}
)
return datasets.DatasetInfo(
description=_DESCRIPTION,
features=features,
homepage=_HOMEPAGE,
license=_LICENSE,
)
def _split_generators(self, dl_manager):
"""Return SplitGenerators."""
file_paths = dl_manager.download_and_extract(_URLS)
return [
datasets.SplitGenerator(
name=datasets.Split.TEST,
gen_kwargs={
"file_paths": file_paths,
},
),
]
def _generate_examples(self, file_paths):
"""Yield examples."""
for file_path in file_paths:
yield file_path, {"image": file_path}
```
### Expected behavior
When `len(_URLS) < 16`, it works.
```python
In [3]: dataset = load_dataset('Freed-Wu/kodak', split='test')
Downloading: 100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 2.53k/2.53k [00:00<00:00, 3.02MB/s]
[11/19/22 22:04:28] WARNING Using custom data configuration default builder.py:379
Downloading and preparing dataset kodak/default to /home/wzy/.cache/huggingface/datasets/Freed-Wu___kodak/default/0.0.1/d26017602a592b5bfa7e008127cdf9dec5af220c9068005f1b4eda036031f475...
Downloading: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 593k/593k [00:00<00:00, 2.88MB/s]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 621k/621k [00:03<00:00, 166kB/s]
Downloading: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 531k/531k [00:01<00:00, 366kB/s]
100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 16/16 [00:13<00:00, 1.18it/s]
100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 16/16 [00:00<00:00, 3832.38it/s]
Dataset kodak downloaded and prepared to /home/wzy/.cache/huggingface/datasets/Freed-Wu___kodak/default/0.0.1/d26017602a592b5bfa7e008127cdf9dec5af220c9068005f1b4eda036031f475. Subsequent calls will reuse this data.
```
### Environment info
- `datasets` version: 2.7.0
- Platform: Linux-6.0.8-arch1-1-x86_64-with-glibc2.36
- Python version: 3.10.8
- PyArrow version: 9.0.0
- Pandas version: 1.4.4
| null |
{
"+1": 0,
"-1": 0,
"confused": 0,
"eyes": 0,
"heart": 0,
"hooray": 0,
"laugh": 0,
"rocket": 0,
"total_count": 0,
"url": "https://api.github.com/repos/huggingface/datasets/issues/5270/reactions"
}
|
https://api.github.com/repos/huggingface/datasets/issues/5270/timeline
| null | null |
{
"completed": 0,
"percent_completed": 0,
"total": 0
}
|
{
"blocked_by": 0,
"blocking": 0,
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| false
| null |
https://api.github.com/repos/huggingface/datasets/issues/5269
|
https://api.github.com/repos/huggingface/datasets
|
https://api.github.com/repos/huggingface/datasets/issues/5269/labels{/name}
|
https://api.github.com/repos/huggingface/datasets/issues/5269/comments
|
https://api.github.com/repos/huggingface/datasets/issues/5269/events
|
https://github.com/huggingface/datasets/issues/5269
| 1,456,485,799
|
I_kwDODunzps5W0DWn
| 5,269
|
Shell completions
|
{
"avatar_url": "https://avatars.githubusercontent.com/u/32936898?v=4",
"events_url": "https://api.github.com/users/Freed-Wu/events{/privacy}",
"followers_url": "https://api.github.com/users/Freed-Wu/followers",
"following_url": "https://api.github.com/users/Freed-Wu/following{/other_user}",
"gists_url": "https://api.github.com/users/Freed-Wu/gists{/gist_id}",
"gravatar_id": "",
"html_url": "https://github.com/Freed-Wu",
"id": 32936898,
"login": "Freed-Wu",
"node_id": "MDQ6VXNlcjMyOTM2ODk4",
"organizations_url": "https://api.github.com/users/Freed-Wu/orgs",
"received_events_url": "https://api.github.com/users/Freed-Wu/received_events",
"repos_url": "https://api.github.com/users/Freed-Wu/repos",
"site_admin": false,
"starred_url": "https://api.github.com/users/Freed-Wu/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/Freed-Wu/subscriptions",
"type": "User",
"url": "https://api.github.com/users/Freed-Wu",
"user_view_type": "public"
}
|
[
{
"color": "a2eeef",
"default": true,
"description": "New feature or request",
"id": 1935892871,
"name": "enhancement",
"node_id": "MDU6TGFiZWwxOTM1ODkyODcx",
"url": "https://api.github.com/repos/huggingface/datasets/labels/enhancement"
}
] |
closed
| false
| null |
[] |
[
"I don't think we need completion on the datasets-cli, since we're mainly developing huggingface-cli",
"I see."
] | 2022-11-19T13:48:59
| 2022-11-21T15:06:15
| 2022-11-21T15:06:14
|
NONE
| null | null | null | null |
### Feature request
Like <https://github.com/huggingface/huggingface_hub/issues/1197>, datasets-cli maybe need it, too.
### Motivation
See above.
### Your contribution
Maybe.
|
{
"avatar_url": "https://avatars.githubusercontent.com/u/32936898?v=4",
"events_url": "https://api.github.com/users/Freed-Wu/events{/privacy}",
"followers_url": "https://api.github.com/users/Freed-Wu/followers",
"following_url": "https://api.github.com/users/Freed-Wu/following{/other_user}",
"gists_url": "https://api.github.com/users/Freed-Wu/gists{/gist_id}",
"gravatar_id": "",
"html_url": "https://github.com/Freed-Wu",
"id": 32936898,
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I_kwDODunzps5Wvbtw
| 5,265
|
Get an IterableDataset from a map-style Dataset
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[
"I think `stream` could be misleading since the data is not being streamed from remote endpoints (one could think that's the case when they see `load_dataset` followed by `stream`). Hence, I prefer the second option.\r\n\r\nPS: When we resolve https://github.com/huggingface/datasets/issues/4542, we could add `as_tf_dataset` to the API for consistency and deprecate `to_tf_dataset`."
] | 2022-11-18T14:54:40
| 2023-02-01T16:36:03
| 2023-02-01T16:36:03
|
MEMBER
| null | null | null | null |
This is useful to leverage iterable datasets specific features like:
- fast approximate shuffling
- lazy map, filter etc.
Iterating over the resulting iterable dataset should be at least as fast at iterating over the map-style dataset.
Here are some ideas regarding the API:
```python
# 1.
# - consistency with load_dataset(..., streaming=True)
# - gives intuition that map/filter/etc. are done on-the-fly
ids = ds.stream()
# 2.
# - more explicit on the output type
# - but maybe sounds like a conversion tool rather than a step in a processing pipeline
ids = ds.as_iterable_dataset()
```
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I_kwDODunzps5WvWWq
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`datasets` can't read a Parquet file in Python 3.9.13
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[
"Could you share the full stack trace please ?\r\n\r\n\r\nCan you also try running this code ? It can be useful to determine if the issue comes from `datasets` or `fsspec` (streaming) or `pyarrow` (parquet reading):\r\n```python\r\nds = load_dataset(\"parquet\", data_files=a_parquet_file_url, use_auth_token=True)\r\n```",
"Here's the full trace\r\n```\r\nTraceback (most recent call last):\r\n File \"/home/loubna_huggingface_co/load.py\", line 15, in <module>\r\n ds_all = load_dataset(\"bigcode/the-stack-dedup-pjj\", data_dir=\"data/java\",use_auth_token=True, split=\"train\", revision=\"v1.1.a1\")\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 1742, in load_dataset\r\n builder_instance.download_and_prepare(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 814, in download_and_prepare\r\n self._download_and_prepare(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 905, in _download_and_prepare\r\n self._prepare_split(split_generator, **prepare_split_kwargs)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 1502, in _prepare_split\r\n for key, table in logging.tqdm(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/std.py\", line 1195, in __iter__\r\n for obj in iterable:\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/packaged_modules/parquet/parquet.py\", line 67, in _generate_tables\r\n parquet_file = pq.ParquetFile(f)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/pyarrow/parquet/__init__.py\", line 286, in __init__\r\n self.reader.open(\r\n File \"pyarrow/_parquet.pyx\", line 1227, in pyarrow._parquet.ParquetReader.open\r\n File \"pyarrow/error.pxi\", line 100, in pyarrow.lib.check_status\r\npyarrow.lib.ArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.\r\n```\r\n\r\nwhen running\r\n```python\r\nds = load_dataset(\"parquet\", data_files=\"https://huggingface.co/datasets/bigcode/the-stack-dedup-pjj/blob/v1.1.a1/data/java/data_0000.parquet\", use_auth_token=True)\r\n```\r\nI get 401 error, but that's the case for the python subset too which I can load properly\r\n```\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 1719, in load_dataset\r\n builder_instance = load_dataset_builder(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 1497, in load_dataset_builder\r\n dataset_module = dataset_module_factory(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 1134, in dataset_module_factory\r\n return PackagedDatasetModuleFactory(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 707, in get_module\r\n data_files = DataFilesDict.from_local_or_remote(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/data_files.py\", line 795, in from_local_or_remote\r\n DataFilesList.from_local_or_remote(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/data_files.py\", line 764, in from_local_or_remote\r\n origin_metadata = _get_origin_metadata_locally_or_by_urls(data_files, use_auth_token=use_auth_token)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/data_files.py\", line 710, in _get_origin_metadata_locally_or_by_urls\r\n return thread_map(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/contrib/concurrent.py\", line 94, in thread_map\r\n return _executor_map(ThreadPoolExecutor, fn, *iterables, **tqdm_kwargs)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/contrib/concurrent.py\", line 76, in _executor_map\r\n return list(tqdm_class(ex.map(fn, *iterables, **map_args), **kwargs))\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/std.py\", line 1183, in __iter__\r\n for obj in iterable:\r\n File \"/opt/conda/envs/venv/lib/python3.9/concurrent/futures/_base.py\", line 609, in result_iterator\r\n yield fs.pop().result()\r\n File \"/opt/conda/envs/venv/lib/python3.9/concurrent/futures/_base.py\", line 446, in result\r\n return self.__get_result()\r\n File \"/opt/conda/envs/venv/lib/python3.9/concurrent/futures/_base.py\", line 391, in __get_result\r\n raise self._exception\r\n File \"/opt/conda/envs/venv/lib/python3.9/concurrent/futures/thread.py\", line 58, in run\r\n result = self.fn(*self.args, **self.kwargs)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/data_files.py\", line 701, in _get_single_origin_metadata_locally_or_by_urls\r\n return (request_etag(data_file, use_auth_token=use_auth_token),)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/utils/file_utils.py\", line 411, in request_etag\r\n response.raise_for_status()\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/requests/models.py\", line 960, in raise_for_status\r\n raise HTTPError(http_error_msg, response=self)\r\nrequests.exceptions.HTTPError: 401 Client Error: Unauthorized for url: https://huggingface.co/datasets/bigcode/the-stack-dedup-pjj/blob/v1.1.a1/data/python/data_0000.parquet```",
"Can you check you used the right token ? You shouldn't get a 401 using your token",
"I checked it’s the right token, when loading the full dataset I get the error after data extraction so I can access the files. \r\n```\r\nDownloading and preparing dataset parquet/bigcode--the-stack-dedup-pjj to /home/loubna_huggingface_co/.cache/huggingface/datasets/bigcode___parquet/bigcode--the-stack-dedup-pjj-872ffac7f4bb46ca/0.0.0/2a3b91fbd88a2c90d1dbbb32b460cf621d31bd5b05b934492fdef7d8d6f236ec...\r\nDownloading data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 22.38it/s]\r\nExtracting data files: 100%|███████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 49.91it/s]\r\nTraceback (most recent call last):\r\n File \"/home/loubna_huggingface_co/load_ds.py\", line 5, in <module>\r\n ds = load_dataset(\"bigcode/the-stack-dedup-pjj\", data_dir=\"data/java\", use_auth_token=True,split=\"train\", revision=\"v1.1.a1\")\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py\", line 1742, in load_dataset\r\n builder_instance.download_and_prepare(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 814, in download_and_prepare\r\n self._download_and_prepare(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 905, in _download_and_prepare\r\n self._prepare_split(split_generator, **prepare_split_kwargs)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py\", line 1502, in _prepare_split\r\n for key, table in logging.tqdm(\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/std.py\", line 1195, in __iter__\r\n for obj in iterable:\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/datasets/packaged_modules/parquet/parquet.py\", line 67, in _generate_tables\r\n parquet_file = pq.ParquetFile(f)\r\n File \"/opt/conda/envs/venv/lib/python3.9/site-packages/pyarrow/parquet/__init__.py\", line 286, in __init__\r\n self.reader.open(\r\n File \"pyarrow/_parquet.pyx\", line 1227, in pyarrow._parquet.ParquetReader.open\r\n File \"pyarrow/error.pxi\", line 100, in pyarrow.lib.check_status\r\npyarrow.lib.ArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.\r\n```\r\nCould it be that I'm using a wrong url, I just copied it from the address bar",
"The URL is wrong indeed, the right one is the one with \"resolve\" (the one you get when clicking on \"download\")- otherwise you try to download an html page ;)\r\n```\r\nhttps://huggingface.co/datasets/bigcode/the-stack-dedup-pjj/resolve/v1.1.a1/data/java/data_0000.parquet\r\n```",
"Ah thanks! So I tried it with the first parquet file and it works, is there a way to know which parquet file was causing the issue since there are a lot of shards?",
"I think you have to try them all :/\r\n\r\nAlternatively you can add a try/catch in `parquet.py` in `datasets` to raise the name of the file that fails at doing `parquet_file = pq.ParquetFile(f)` when you run your initial code\r\n```python\r\nload_dataset(\"bigcode/the-stack-dedup-pjj\", data_dir=\"data/java\", split=\"train\", revision=\"v1.1.a1\", use_auth_token=True)\r\n```\r\nbut it will still iterate on all the files until it fails",
"Ok I will do that",
"I did find the file, and I get the same error as before \r\n```\r\nDownloading data files: 100%|███████████████████| 1/1 [00:00<00:00, 8160.12it/s]\r\nExtracting data files: 100%|████████████████████| 1/1 [00:00<00:00, 1447.81it/s]\r\n \r\n---------------------------------------------------------------------------\r\nArrowInvalid Traceback (most recent call last)\r\nInput In [22], in <cell line: 7>()\r\n 4 data_features = (data[\"train\"].features)\r\n 6 url = \"/home/loubna_huggingface_co/.cache/huggingface/datasets/downloads/93431bc4380de07de8b0ab533666cb5a6120cbe266779e0a63c86bf7717475d7\"\r\n----> 7 data = load_dataset(\"parquet\", \r\n 8 data_files=url,\r\n 9 split=\"train\",\r\n 10 features=data_features,\r\n 11 use_auth_token=True)\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/datasets/load.py:1742, in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, **config_kwargs)\r\n 1739 try_from_hf_gcs = path not in _PACKAGED_DATASETS_MODULES\r\n 1741 # Download and prepare data\r\n-> 1742 builder_instance.download_and_prepare(\r\n 1743 download_config=download_config,\r\n 1744 download_mode=download_mode,\r\n 1745 ignore_verifications=ignore_verifications,\r\n 1746 try_from_hf_gcs=try_from_hf_gcs,\r\n 1747 use_auth_token=use_auth_token,\r\n 1748 )\r\n 1750 # Build dataset for splits\r\n 1751 keep_in_memory = (\r\n 1752 keep_in_memory if keep_in_memory is not None else is_small_dataset(builder_instance.info.dataset_size)\r\n 1753 )\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py:814, in DatasetBuilder.download_and_prepare(self, output_dir, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, file_format, max_shard_size, storage_options, **download_and_prepare_kwargs)\r\n 808 if not downloaded_from_gcs:\r\n 809 prepare_split_kwargs = {\r\n 810 \"file_format\": file_format,\r\n 811 \"max_shard_size\": max_shard_size,\r\n 812 **download_and_prepare_kwargs,\r\n 813 }\r\n--> 814 self._download_and_prepare(\r\n 815 dl_manager=dl_manager,\r\n 816 verify_infos=verify_infos,\r\n 817 **prepare_split_kwargs,\r\n 818 **download_and_prepare_kwargs,\r\n 819 )\r\n 820 # Sync info\r\n 821 self.info.dataset_size = sum(split.num_bytes for split in self.info.splits.values())\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py:905, in DatasetBuilder._download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)\r\n 901 split_dict.add(split_generator.split_info)\r\n 903 try:\r\n 904 # Prepare split will record examples associated to the split\r\n--> 905 self._prepare_split(split_generator, **prepare_split_kwargs)\r\n 906 except OSError as e:\r\n 907 raise OSError(\r\n 908 \"Cannot find data file. \"\r\n 909 + (self.manual_download_instructions or \"\")\r\n 910 + \"\\nOriginal error:\\n\"\r\n 911 + str(e)\r\n 912 ) from None\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/datasets/builder.py:1502, in ArrowBasedBuilder._prepare_split(self, split_generator, file_format, max_shard_size)\r\n 1500 total_num_examples, total_num_bytes = 0, 0\r\n 1501 try:\r\n-> 1502 for key, table in logging.tqdm(\r\n 1503 generator,\r\n 1504 unit=\" tables\",\r\n 1505 leave=False,\r\n 1506 disable=not logging.is_progress_bar_enabled(),\r\n 1507 ):\r\n 1508 if max_shard_size is not None and writer._num_bytes > max_shard_size:\r\n 1509 num_examples, num_bytes = writer.finalize()\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/tqdm/std.py:1195, in tqdm.__iter__(self)\r\n 1192 time = self._time\r\n 1194 try:\r\n-> 1195 for obj in iterable:\r\n 1196 yield obj\r\n 1197 # Update and possibly print the progressbar.\r\n 1198 # Note: does not call self.update(1) for speed optimisation.\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/datasets/packaged_modules/parquet/parquet.py:67, in Parquet._generate_tables(self, files)\r\n 65 for file_idx, file in enumerate(itertools.chain.from_iterable(files)):\r\n 66 with open(file, \"rb\") as f:\r\n---> 67 parquet_file = pq.ParquetFile(f)\r\n 68 try:\r\n 69 for batch_idx, record_batch in enumerate(\r\n 70 parquet_file.iter_batches(batch_size=self.config.batch_size, columns=self.config.columns)\r\n 71 ):\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/pyarrow/parquet/__init__.py:286, in ParquetFile.__init__(self, source, metadata, common_metadata, read_dictionary, memory_map, buffer_size, pre_buffer, coerce_int96_timestamp_unit, decryption_properties, thrift_string_size_limit, thrift_container_size_limit)\r\n 280 def __init__(self, source, *, metadata=None, common_metadata=None,\r\n 281 read_dictionary=None, memory_map=False, buffer_size=0,\r\n 282 pre_buffer=False, coerce_int96_timestamp_unit=None,\r\n 283 decryption_properties=None, thrift_string_size_limit=None,\r\n 284 thrift_container_size_limit=None):\r\n 285 self.reader = ParquetReader()\r\n--> 286 self.reader.open(\r\n 287 source, use_memory_map=memory_map,\r\n 288 buffer_size=buffer_size, pre_buffer=pre_buffer,\r\n 289 read_dictionary=read_dictionary, metadata=metadata,\r\n 290 coerce_int96_timestamp_unit=coerce_int96_timestamp_unit,\r\n 291 decryption_properties=decryption_properties,\r\n 292 thrift_string_size_limit=thrift_string_size_limit,\r\n 293 thrift_container_size_limit=thrift_container_size_limit,\r\n 294 )\r\n 295 self.common_metadata = common_metadata\r\n 296 self._nested_paths_by_prefix = self._build_nested_paths()\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/pyarrow/_parquet.pyx:1227, in pyarrow._parquet.ParquetReader.open()\r\n\r\nFile /opt/conda/envs/venv/lib/python3.9/site-packages/pyarrow/error.pxi:100, in pyarrow.lib.check_status()\r\n\r\nArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.\r\n```",
"Can you check the JSON file associated to `/home/loubna_huggingface_co/.cache/huggingface/datasets/downloads/93431bc4380de07de8b0ab533666cb5a6120cbe266779e0a63c86bf7717475d7` ? In the JSON file we can know from where it was downloaded\r\n\r\nYou can find it at `/home/loubna_huggingface_co/.cache/huggingface/datasets/downloads/93431bc4380de07de8b0ab533666cb5a6120cbe266779e0a63c86bf7717475d7.json`",
"It's this file `https://huggingface.co/datasets/bigcode/the-stack-dedup-pjj/resolve/f48656daa9f3a3607dacf8b57a65810a6a7a7f73/data/java/data_0022.parquet` loading it gives the same error",
"I'm able to load it properly using\r\n```python\r\nds = load_dataset(\"parquet\", data_files=a_parquet_file_url, use_auth_token=token)\r\n```\r\n\r\nMy guess is that your download was corrupted. Please delete `93431bc4380de07de8b0ab533666cb5a6120cbe266779e0a63c86bf7717475d7` and `93431bc4380de07de8b0ab533666cb5a6120cbe266779e0a63c86bf7717475d7.json` locally and try again",
"That worked, thanks! But I thought if something went wrong with a download `datasets` creates new cache for all the files, that's not the case? (at some point I even changed dataset versions so it was still using that cache?)",
"Cool !\r\n\r\n> But I thought if something went wrong with a download datasets creates new cache for all the files\r\n\r\nWe don't perform integrity verifications if we don't know in advance the hash of the file to download.\r\n\r\n> at some point I even changed dataset versions so it was still using that cache?\r\n\r\n`datasets` caches the files by URL and ETag. If the content of a file changes, then the ETag changes and so it redownloads the file",
"I see, thank you!\r\n",
"I experience the same error in v 2.12.0. But found out it was due to one column from polars was a categorical dtype (related to the error from #5706. Temporarily resolved it by casting the column to str instead."
] | 2022-11-18T14:44:01
| 2023-05-07T09:52:59
| 2022-11-22T11:18:08
|
NONE
| null | null | null | null |
### Describe the bug
I have an error when trying to load this [dataset](https://huggingface.co/datasets/bigcode/the-stack-dedup-pjj) (it's private but I can add you to the bigcode org). `datasets` can't read one of the parquet files in the Java subset
```python
from datasets import load_dataset
ds = load_dataset("bigcode/the-stack-dedup-pjj", data_dir="data/java", split="train", revision="v1.1.a1", use_auth_token=True)
````
```
File "pyarrow/error.pxi", line 100, in pyarrow.lib.check_status
pyarrow.lib.ArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.
```
It seems to be an issue with new Python versions, Because it works in these two environements:
```
- `datasets` version: 2.6.1
- Platform: Linux-5.4.0-131-generic-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 9.0.0
- Pandas version: 1.3.4
```
```
- `datasets` version: 2.6.1
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.12
- PyArrow version: 9.0.0
- Pandas version: 1.3.4
```
But not in this:
```
- `datasets` version: 2.6.1
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-glibc2.28
- Python version: 3.9.13
- PyArrow version: 9.0.0
- Pandas version: 1.3.4
```
### Steps to reproduce the bug
Load the dataset in python 3.9.13
### Expected behavior
Load the dataset without the pyarrow error.
### Environment info
```
- `datasets` version: 2.6.1
- Platform: Linux-4.19.0-22-cloud-amd64-x86_64-with-glibc2.28
- Python version: 3.9.13
- PyArrow version: 9.0.0
- Pandas version: 1.3.4
```
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| 1,455,252,626
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I_kwDODunzps5WvWSS
| 5,263
|
Save a dataset in a determined number of shards
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[] | 2022-11-18T14:43:54
| 2022-12-14T18:22:59
| 2022-12-14T18:22:59
|
MEMBER
| null | null | null | null |
This is useful to distribute the shards to training nodes.
This can be implemented in `save_to_disk` and can also leverage multiprocessing to speed up the process
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AttributeError: 'Value' object has no attribute 'names'
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[
"Hi ! It looks like your \"isDif\" column is a Sequence of Value(\"string\"), not a Sequence of ClassLabel.\r\n\r\nYou can convert your Value(\"string\") feature type to a ClassLabel feature type this way:\r\n```python\r\nfrom datasets import ClassLabel, Sequence\r\n\r\n# provide the label_names yourself\r\nlabel_names = [...]\r\n# OR get them from the dataset\r\nlabel_names = sorted(set(label for labels in raw_datasets[\"train\"][\"isDif\"] for label in labels))\r\n\r\n# Cast to ClassLabel\r\nraw_datasets = raw_datasets.cast_column(\"isDif\", Sequence(ClassLabel(names=label_names)))\r\n```\r\n",
"thank you \r\nit works 💯 "
] | 2022-11-18T13:58:42
| 2022-11-22T10:09:24
| 2022-11-22T10:09:23
|
NONE
| null | null | null | null |
Hello
I'm trying to build a model for custom token classification
I already followed the token classification course on huggingface
while adapting the code to my work, this message occures :
'Value' object has no attribute 'names'
Here's my code:
`raw_datasets`
generates
DatasetDict({
train: Dataset({
features: ['isDisf', 'pos', 'tokens', 'id'],
num_rows: 14
})
})
`raw_datasets["train"][3]["isDisf"]`
generates
['B_RM', 'I_RM', 'I_RM', 'B_RP', 'I_RP', 'O', 'O']
`dis_feature = raw_datasets["train"].features["isDisf"]
dis_feature`
generates
Sequence(feature=Value(dtype='string', id=None), length=-1, id=None)
and
`label_names = dis_feature.feature.names
label_names`
generates
AttributeError Traceback (most recent call last)
[<ipython-input-28-972fd54a869a>](https://localhost:8080/#) in <module>
----> 1 label_names = dis_feature.feature.names
2 label_names
AttributeError: 'Value' object has
AttributeError: 'Value' object has no attribute 'names'
Thank you for your help
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I_kwDODunzps5WtCo1
| 5,261
|
Add PubTables-1M
|
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[
"cc @albertvillanova the author would like to add this dataset to the hub: https://github.com/microsoft/table-transformer/issues/68#issuecomment-1319114621. Could you help him out?"
] | 2022-11-18T07:56:36
| 2022-11-18T08:02:18
| null |
CONTRIBUTOR
| null | null | null | null |
### Name
PubTables-1M
### Paper
https://openaccess.thecvf.com/content/CVPR2022/html/Smock_PubTables-1M_Towards_Comprehensive_Table_Extraction_From_Unstructured_Documents_CVPR_2022_paper.html
### Data
https://github.com/microsoft/table-transformer
### Motivation
Table Transformer is now available in 🤗 Transformer, and it was trained on PubTables-1M. It's a large dataset for table extraction and structure recognition in unstructured documents.
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| 1,453,921,697
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I_kwDODunzps5WqRWh
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consumer-finance-complaints dataset not loading
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[
"Thanks for reporting, @adiprasad.\r\n\r\nWe are having a look at it.",
"I have opened an issue in that dataset Community tab on the Hub: https://huggingface.co/datasets/consumer-finance-complaints/discussions/1\r\n\r\nPlease note that in the meantime, you can load the dataset by passing `ignore_verifications=True`:\r\n```python\r\n>>> ds = load_dataset(\"consumer-finance-complaints\", ignore_verifications=True)\r\n>>> ds\r\nDatasetDict({\r\n train: Dataset({\r\n features: ['Date Received', 'Product', 'Sub Product', 'Issue', 'Sub Issue', 'Complaint Text', 'Company Public Response', 'Company', 'State', 'Zip Code', 'Tags', 'Consumer Consent Provided', 'Submitted via', 'Date Sent To Company', 'Company Response To Consumer', 'Timely Response', 'Consumer Disputed', 'Complaint ID'],\r\n num_rows: 3079747\r\n })\r\n})\r\n```",
"PR fixing this issue: https://huggingface.co/datasets/consumer-finance-complaints/discussions/2"
] | 2022-11-17T20:10:26
| 2022-11-18T10:16:53
| null |
NONE
| null | null | null | null |
### Describe the bug
Error during dataset loading
### Steps to reproduce the bug
```
>>> import datasets
>>> cf_raw = datasets.load_dataset("consumer-finance-complaints")
Downloading builder script: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 8.42k/8.42k [00:00<00:00, 3.33MB/s]
Downloading metadata: 100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 5.60k/5.60k [00:00<00:00, 2.90MB/s]
Downloading readme: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 16.6k/16.6k [00:00<00:00, 510kB/s]
Downloading and preparing dataset consumer-finance-complaints/default to /root/.cache/huggingface/datasets/consumer-finance-complaints/default/0.0.0/30e483d37fb4b25bb98cad1bfd2dc48f6ed6d1f3371eb4568c625a61d1a79b69...
Downloading data: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 511M/511M [00:04<00:00, 103MB/s]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/skunk-pod-storage-lee-2emartie-40ibm-2ecom-pvc/anaconda3/envs/datasets/lib/python3.8/site-packages/datasets/load.py", line 1741, in load_dataset
builder_instance.download_and_prepare(
File "/skunk-pod-storage-lee-2emartie-40ibm-2ecom-pvc/anaconda3/envs/datasets/lib/python3.8/site-packages/datasets/builder.py", line 822, in download_and_prepare
self._download_and_prepare(
File "/skunk-pod-storage-lee-2emartie-40ibm-2ecom-pvc/anaconda3/envs/datasets/lib/python3.8/site-packages/datasets/builder.py", line 1555, in _download_and_prepare
super()._download_and_prepare(
File "/skunk-pod-storage-lee-2emartie-40ibm-2ecom-pvc/anaconda3/envs/datasets/lib/python3.8/site-packages/datasets/builder.py", line 931, in _download_and_prepare
verify_splits(self.info.splits, split_dict)
File "/skunk-pod-storage-lee-2emartie-40ibm-2ecom-pvc/anaconda3/envs/datasets/lib/python3.8/site-packages/datasets/utils/info_utils.py", line 74, in verify_splits
raise NonMatchingSplitsSizesError(str(bad_splits))
datasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='train', num_bytes=1605177353, num_examples=2455765, shard_lengths=None, dataset_name=None), 'recorded': SplitInfo(name='train', num_bytes=2043641693, num_examples=3079747, shard_lengths=[721000, 656000, 788000, 846000, 68747], dataset_name='consumer-finance-complaints')}]
```
### Expected behavior
dataset should load
### Environment info
>>> datasets.__version__
'2.7.0'
Python 3.8.10
"Ubuntu 20.04.4 LTS"
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I_kwDODunzps5Wo4DT
| 5,259
|
datasets 2.7 introduces sharding error
|
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[
"I notice a comment in the code says:\r\n`Having lists of different sizes makes sharding ambigious, raise an error in this case until we decide how to define sharding without ambiguity for users` \r\n \r\n ... which suggests this update was pushed knowing that it might break some things. But, it didn't seem to have a useful error message of an argument that could be passed to avoid the error.",
"Sorry for the inconvenience, I opened a PR in your repo to fix this: https://huggingface.co/datasets/sil-ai/bloom-speech/discussions/2\r\n\r\nBasically we've always considered lists in `gen_kwargs` to be a shard list that we can split and pass into different workers to generate the dataset (e.g. if you pass `num_proc=` in `load_dataset()` to generate the dataset in parallel), but it was documented only recently",
"@lhoestq Thanks for the help. It looks like that took care of it."
] | 2022-11-17T15:36:52
| 2022-12-24T01:44:02
| 2022-11-18T12:52:05
|
NONE
| null | null | null | null |
### Describe the bug
dataset fails to load with runtime error
`RuntimeError: Sharding is ambiguous for this dataset: we found several data sources lists of different lengths, and we don't know over which list we should parallelize:
- key audio_files has length 46
- key data has length 0
To fix this, check the 'gen_kwargs' and make sure to use lists only for data sources, and use tuples otherwise. In the end there should only be one single list, or several lists with the same length.`
### Steps to reproduce the bug
With datasets[audio] 2.7 loaded, and logged into hugging face,
`data = datasets.load_dataset('sil-ai/bloom-speech', 'bis', use_auth_token=True)`
creates the error.
Full stack trace:
```---------------------------------------------------------------------------
RuntimeError Traceback (most recent call last)
[<ipython-input-7-8cb9ca0f79f0>](https://localhost:8080/#) in <module>
----> 1 data = datasets.load_dataset('sil-ai/bloom-speech', 'bis', use_auth_token=True)
5 frames
[/usr/local/lib/python3.7/dist-packages/datasets/load.py](https://localhost:8080/#) in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, num_proc, **config_kwargs)
1745 try_from_hf_gcs=try_from_hf_gcs,
1746 use_auth_token=use_auth_token,
-> 1747 num_proc=num_proc,
1748 )
1749
[/usr/local/lib/python3.7/dist-packages/datasets/builder.py](https://localhost:8080/#) in download_and_prepare(self, output_dir, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, file_format, max_shard_size, num_proc, storage_options, **download_and_prepare_kwargs)
824 verify_infos=verify_infos,
825 **prepare_split_kwargs,
--> 826 **download_and_prepare_kwargs,
827 )
828 # Sync info
[/usr/local/lib/python3.7/dist-packages/datasets/builder.py](https://localhost:8080/#) in _download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs)
1554 def _download_and_prepare(self, dl_manager, verify_infos, **prepare_splits_kwargs):
1555 super()._download_and_prepare(
-> 1556 dl_manager, verify_infos, check_duplicate_keys=verify_infos, **prepare_splits_kwargs
1557 )
1558
[/usr/local/lib/python3.7/dist-packages/datasets/builder.py](https://localhost:8080/#) in _download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
911 try:
912 # Prepare split will record examples associated to the split
--> 913 self._prepare_split(split_generator, **prepare_split_kwargs)
914 except OSError as e:
915 raise OSError(
[/usr/local/lib/python3.7/dist-packages/datasets/builder.py](https://localhost:8080/#) in _prepare_split(self, split_generator, check_duplicate_keys, file_format, num_proc, max_shard_size)
1362 fpath = path_join(self._output_dir, fname)
1363
-> 1364 num_input_shards = _number_of_shards_in_gen_kwargs(split_generator.gen_kwargs)
1365 if num_input_shards <= 1 and num_proc is not None:
1366 logger.warning(
[/usr/local/lib/python3.7/dist-packages/datasets/utils/sharding.py](https://localhost:8080/#) in _number_of_shards_in_gen_kwargs(gen_kwargs)
16 + "\n".join(f"\t- key {key} has length {length}" for key, length in lists_lengths.items())
17 + "\nTo fix this, check the 'gen_kwargs' and make sure to use lists only for data sources, "
---> 18 + "and use tuples otherwise. In the end there should only be one single list, or several lists with the same length."
19 )
20 )
RuntimeError: Sharding is ambiguous for this dataset: we found several data sources lists of different lengths, and we don't know over which list we should parallelize:
- key audio_files has length 46
- key data has length 0
To fix this, check the 'gen_kwargs' and make sure to use lists only for data sources, and use tuples otherwise. In the end there should only be one single list, or several lists with the same length.```
### Expected behavior
the dataset loads in datasets version 2.6.1 and should load with datasets 2.7
### Environment info
- `datasets` version: 2.7.0
- Platform: Linux-5.10.133+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.15
- PyArrow version: 6.0.1
- Pandas version: 1.3.5
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I_kwDODunzps5Woudc
| 5,258
|
Restore order of split names in dataset_info for canonical datasets
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"The bulk edit is running...\r\n\r\nSee for example: \r\n- A single config: https://huggingface.co/datasets/acronym_identification/discussions/2\r\n- Multiple configs: https://huggingface.co/datasets/babi_qa/discussions/1",
"TODO: Add \"dataset_info\" YAML metadata to:\r\n- [x] \"chr_en\" has no metadata JSON file, nor \"dataset_info\" YAML tag in its card\r\n - Fixing PR: https://huggingface.co/datasets/chr_en/discussions/1 \r\n- [x] \"conll2000\" has no metadata JSON file, but it has \"dataset_info\" YAML tag in its card\r\n- [x] \"crime_and_punish\" has no metadata JSON file, but it has \"dataset_info\" YAML tag in its card\r\n- [x] \"dart\" has no metadata JSON file, but it has \"dataset_info\" YAML tag in its card\r\n- [x] \"iwslt2017\" has no metadata JSON file, but it has \"dataset_info\" YAML tag in its card\r\n- [ ] \"mc4\" has no metadata JSON file, nor \"dataset_info\" YAML tag in its card\r\n- [ ] \"the_pile\" has no metadata JSON file, nor \"dataset_info\" YAML tag in its card\r\n- [ ] \"timit_asr\" has no metadata JSON file, nor \"dataset_info\" YAML tag in its card",
"The bulk edit is finished."
] | 2022-11-17T15:13:15
| 2023-02-16T09:49:05
| 2022-11-19T06:51:37
|
MEMBER
| null | null | null | null |
After a bulk edit of canonical datasets to create the YAML `dataset_info` metadata, the split names were accidentally sorted alphabetically. See for example:
- https://huggingface.co/datasets/bc2gm_corpus/commit/2384629484401ecf4bb77cd808816719c424e57c
Note that this order is the one appearing in the preview of the datasets.
I'm making a bulk edit to align the order of the splits appearing in the metadata info with the order appearing in the loading script.
Related to:
- #5202
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Add a Depth Estimation dataset - DIODE / NYUDepth / KITTI
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[
"Also cc @mariosasko and @lhoestq ",
"Cool ! Let us know if you have questions or if we can help :)\r\n\r\nI guess we'll also have to create the NYU CS Department on the Hub ?",
"> I guess we'll also have to create the NYU CS Department on the Hub ?\r\n\r\nYes, you're right! Let me add it to my profile first, and then we can transfer. Meanwhile, if it's recommended to loop the dataset author in here, let me know. \r\n\r\nAlso, the NYU Depth dataset seems big. Any example scripts for creating image datasets that I could refer? ",
"You can check the imagenet-1k one.\r\n\r\nPS: If the licenses allows it, it'b be nice to host the dataset as sharded TAR archives (like imagenet-1k) instead of the ZIP format they use:\r\n- it will make streaming much faster\r\n- ZIP compression is not well suited for images\r\n- it will allow parallel processing of the dataset (you can pass a subset of shards to each worker)\r\n\r\n> if it's recommended to loop the dataset author in here, let me know.\r\n\r\nIt's recommended indeed, you can send them an email once you have the dataset ready and invite them to the org on the Hub",
"> You can check the imagenet-1k one.\r\n\r\nWhere can I find the script? Are you referring to https://huggingface.co/docs/datasets/image_process ? Or is there anything more specific? ",
"You can find it here: https://huggingface.co/datasets/imagenet-1k/blob/main/imagenet-1k.py",
"Update: started working on it here: https://huggingface.co/datasets/sayakpaul/nyu_depth_v2. \r\n\r\nI am facing an issue and I have detailed it here: https://huggingface.co/datasets/sayakpaul/nyu_depth_v2/discussions/1\r\n\r\nEdit: The issue is gone. \r\n\r\nHowever, since the dataset is distributed as a single TAR archive (following the [URL used in TensorFlow Datasets](https://github.com/tensorflow/datasets/tree/master/tensorflow_datasets/datasets/nyu_depth_v2/nyu_depth_v2_dataset_builder.py)) the loading is taking longer. How would suggest to shard the single TAR archive? \r\n\r\n@lhoestq \r\n\r\n",
"A Colab Notebook demonstrating the dataset loading part: \r\n\r\nhttps://colab.research.google.com/gist/sayakpaul/aa0958c8d4ad8518d52a78f28044d871/scratchpad.ipynb\r\n\r\n@osanseviero @lhoestq \r\n\r\nI will work on a notebook to work with the dataset including data visualization.",
"@osanseviero @lhoestq things seem to work fine with the current version of the dataset [here](https://huggingface.co/datasets/sayakpaul/nyu_depth_v2). Here's a notebook I developed to help with visualization: https://colab.research.google.com/drive/1K3ZU8XUPRDOYD38MQS9nreQXJYitlKSW?usp=sharing. \r\n\r\n@lhoestq I need your help with the following:\r\n\r\n> However, since the dataset is distributed as a single TAR archive (following the [URL used in TensorFlow Datasets](https://github.com/tensorflow/datasets/tree/master/tensorflow_datasets/datasets/nyu_depth_v2/nyu_depth_v2_dataset_builder.py)) the loading is taking longer. How would suggest to shard the single TAR archive?\r\n\r\n@osanseviero @lhoestq question for you:\r\n\r\nWhere should we host the dataset? I think hosting it under hf.co/datasets (that is HF is the org) is fine as we have ImageNet-1k hosted similarly. We could then reach out to Diana Wofk (author of [Fast Depth](https://github.com/dwofk/fast-depth) and the owner of the repo on which TFDS NYU Depth V2 is based) for a review. WDYT? ",
"> However, since the dataset is distributed as a single TAR archive (following the [URL used in TensorFlow Datasets](https://github.com/tensorflow/datasets/tree/master/tensorflow_datasets/datasets/nyu_depth_v2/nyu_depth_v2_dataset_builder.py)) the loading is taking longer. How would suggest to shard the single TAR archive?\r\n\r\nFirst you can separate the train data and the validation data.\r\n\r\nThen since the dataset is quite big, you can even shard the train split and the validation split in multiple TAR archives. Something around 16 archives for train and 4 for validation would be fine for example.\r\n\r\nAlso no need to gzip the TAR archives, the images are already compressed in png or jpeg.",
"> Then since the dataset is quite big, you can even shard the train split and the validation split in multiple TAR archives. Something around 16 archives for train and 4 for validation would be fine for example.\r\n\r\nYes, I got you. But this process seems to be manual and should be tailored for the given dataset. Do you have any script that you used to create the ImageNet-1k shards? \r\n\r\n> Also no need to gzip the TAR archives, the images are already compressed in png or jpeg.\r\n\r\nI was not going to do that. Not sure what brought it up. ",
"> Yes, I got you. But this process seems to be manual and should be tailored for the given dataset. Do you have any script that you used to create the ImageNet-1k shards?\r\n\r\nI don't, but I agree it'd be nice to have a script for that !\r\n\r\n> I was not going to do that. Not sure what brought it up.\r\n\r\nThe original dataset is gzipped for some reason",
"Oh, I am using this URL for the download: https://github.com/tensorflow/datasets/blob/master/tensorflow_datasets/datasets/nyu_depth_v2/nyu_depth_v2_dataset_builder.py#L24. ",
"> Where should we host the dataset? I think hosting it under hf.co/datasets (that is HF is the org) is fine as we have ImageNet-1k hosted similarly.\r\n\r\nMaybe you can create an org for NYU Courant (this is the institute of the lab of the main author of the dataset if I'm not mistaken), and invite the authors to join.\r\n\r\nWe don't add datasets without namespace anymore",
"Updates: https://huggingface.co/datasets/sayakpaul/nyu_depth_v2/discussions/5\r\n\r\nThe entire process (preparing multiple archives, preparing data loading script, etc.) was fun and engaging, thanks to the documentation. I believe we could work on a small blog post that would work as a reference for the future contributors following this path. What say? \r\n\r\nCc: @lhoestq @osanseviero ",
"> I believe we could work on a small blog post that would work as a reference for the future contributors following this path. What say?\r\n\r\n@polinaeterna already mentioned it would be nice to present this process for audio (it's exactly the same), I believe it can be useful to many people",
"Cool. Let's work on that after the NYU Depth Dataset is fully in on Hub (under the appropriate org). 🤗",
"@lhoestq need to discuss something while I am adding the dataset card to https://huggingface.co/datasets/sayakpaul/nyu_depth_v2/. \r\n\r\nAs per [Papers With Code](https://paperswithcode.com/dataset/nyuv2), NYU Depth v2 is used for many different tasks:\r\n\r\n* Monocular depth estimation\r\n* Depth estimation \r\n* Semantic segmentation\r\n* Plane instance segmentation \r\n* ...\r\n\r\nSo, while writing the supported task part of the dataset card, should we focus on all these? IMO, we could focus on just depth estimation and semantic segmentation for now since we have supported models for these two. WDYT?\r\n\r\nAlso, I am getting: \r\n\r\n\r\n```\r\nremote: Your push was accepted, but with warnings:\r\nremote: - Warning: The task_ids \"depth-estimation\" is not in the official list: acceptability-classification, entity-linking-classification, fact-checking, intent-classification, multi-class-classification, multi-label-classification, multi-input-text-classification, natural-language-inference, semantic-similarity-classification, sentiment-classification, topic-classification, semantic-similarity-scoring, sentiment-scoring, sentiment-analysis, hate-speech-detection, text-scoring, named-entity-recognition, part-of-speech, parsing, lemmatization, word-sense-disambiguation, coreference-resolution, extractive-qa, open-domain-qa, closed-domain-qa, news-articles-summarization, news-articles-headline-generation, dialogue-generation, dialogue-modeling, language-modeling, text-simplification, explanation-generation, abstractive-qa, open-domain-abstractive-qa, closed-domain-qa, open-book-qa, closed-book-qa, slot-filling, masked-language-modeling, keyword-spotting, speaker-identification, audio-intent-classification, audio-emotion-recognition, audio-language-identification, multi-label-image-classification, multi-class-image-classification, face-detection, vehicle-detection, instance-segmentation, semantic-segmentation, panoptic-segmentation, image-captioning, grasping, task-planning, tabular-multi-class-classification, tabular-multi-label-classification, tabular-single-column-regression, rdf-to-text, multiple-choice-qa, multiple-choice-coreference-resolution, document-retrieval, utterance-retrieval, entity-linking-retrieval, fact-checking-retrieval, univariate-time-series-forecasting, multivariate-time-series-forecasting, visual-question-answering, document-question-answering\r\nremote: ----------------------------------------------------------\r\nremote: Please find the documentation at:\r\nremote: https://huggingface.co/docs/hub/model-cards#model-card-metadata\r\n```\r\n\r\nWhat should be the plan of action for this?\r\n\r\nCc: @osanseviero \r\n\r\n",
"> What should be the plan of action for this?\r\n\r\nWhen you merged https://github.com/huggingface/hub-docs/pull/488, there is a JS Interfaces GitHub Actions workflow that runs https://github.com/huggingface/hub-docs/actions/workflows/js-interfaces-tests.yml. It has a step called [export-task scripts](https://github.com/huggingface/hub-docs/actions/runs/3622479064/jobs/6107238948) which exports an interface you can use in `dataset`. If you look at the logs, it prints out a map. This map can replace https://github.com/huggingface/datasets/blob/main/src/datasets/utils/resources/tasks.json (tasks.json was generated with this script), which should add depth estimation\r\n",
"Thanks @osanseviero. \r\n\r\nhttps://github.com/huggingface/datasets/pull/5335",
"Closing the issue as the dataset has been successfully added: https://huggingface.co/datasets/sayakpaul/nyu_depth_v2"
] | 2022-11-17T03:22:22
| 2022-12-17T12:20:38
| 2022-12-17T12:20:37
|
MEMBER
| null | null | null | null |
### Name
NYUDepth
### Paper
http://cs.nyu.edu/~silberman/papers/indoor_seg_support.pdf
### Data
https://cs.nyu.edu/~silberman/datasets/nyu_depth_v2.html
### Motivation
Depth estimation is an important problem in computer vision. We have a couple of Depth Estimation models on Hub as well:
* [GLPN](https://huggingface.co/docs/transformers/model_doc/glpn)
* [DPT](https://huggingface.co/docs/transformers/model_doc/dpt)
Would be nice to have a dataset for depth estimation. These datasets usually have three things: input image, depth map image, and depth mask (validity mask to indicate if a reading for a pixel is valid or not). Since we already have [semantic segmentation datasets on the Hub](https://huggingface.co/datasets?task_categories=task_categories:image-segmentation&sort=downloads), I don't think we need any extended utilities to support this addition.
Having this dataset would also allow us to author data preprocessing guides for depth estimation, particularly like the ones we have for other tasks ([example](https://huggingface.co/docs/datasets/image_classification)).
Ccing @osanseviero @nateraw @NielsRogge
Happy to work on adding it.
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https://api.github.com/repos/huggingface/datasets/issues/5251
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| 1,451,761,321
|
I_kwDODunzps5WiB6p
| 5,251
|
Docs are not generated after latest release
|
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"After a discussion with @mishig25:\r\n- He said that this action should be triggered if we call our release branch according to the regex `v*-release`, as transformers does\r\n- I said that our procedure is different: our release branch is *temporary* and it is deleted just after the release PR is merged to main\r\n - Indeed the release tag is not yet created when we make the release PR (not event when this is merged to main), but when we make the Release itself.\r\n\r\nI was thinking that maybe we could change the triggering event: use `release` instead of `push`.\r\n\r\nWhat do you think, @huggingface/datasets?",
"Why is it an issue if our branch is temporary ?",
"He says not; but the branch has no tag yet; does the doc building require the tag? Or just the version number in `__init__.py` or setup.py?",
"It uses `module.__version__` (i.e. the one defined in `__init__.py`) - no need to have a tag\r\n\r\nhttps://github.com/huggingface/doc-builder/blob/81575cf081964c30ea5fd39450f4820db963f18e/src/doc_builder/commands/build.py#L69",
"Thanks, @lhoestq.\r\n\r\n@mishig25 has manually forced the generation of the docs, that are live for 2.7.0 version: https://huggingface.co/docs/datasets/v2.7.0/en/index ",
"Cool ! this can be closed then ?",
"I was waiting for #5250 to be merged to close this.",
"just to confirm, is there anything I need to do from my side ? Or is everything good here ?"
] | 2022-11-16T14:59:31
| 2022-11-22T16:27:50
| 2022-11-22T16:27:50
|
MEMBER
| null | null | null | null |
After the latest `datasets` release version 0.7.0, the docs were not generated.
As we have changed the release procedure (so that now we do not push directly to main branch), maybe we should also change the corresponding GitHub action:
https://github.com/huggingface/datasets/blob/edf1902f954c5568daadebcd8754bdad44b02a85/.github/workflows/build_documentation.yml#L3-L8
Related to:
- #5250
CC: @mishig25
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I_kwDODunzps5WhxDX
| 5,249
|
Protect the main branch from inadvertent direct pushes
|
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"It seems all the tasks have been addressed, meaning this issue can be closed, no?"
] | 2022-11-16T14:19:03
| 2023-12-21T10:28:27
| 2023-12-21T10:28:26
|
MEMBER
| null | null | null | null |
We have decided to implement a protection mechanism in this repository, so that nobody (not even administrators) can inadvertently push accidentally directly to the main branch.
See context here:
- d7c942228b8dcf4de64b00a3053dce59b335f618
To do:
- [x] Protect main branch
- Settings > Branches > Branch protection rules > main > Edit
- [x] Check: Do not allow bypassing the above settings
- The above settings will apply to administrators and custom roles with the "bypass branch protections" permission.
- [x] Additionally, uncheck: Require approvals [under "Require a pull request before merging", which was already checked]
- Before, we could exceptionally merge a non-approved PR, using Administrator bypass
- Now that Administrator bypass is no longer possible, we would always need an approval to be able to merge; and pull request authors cannot approve their own pull requests. This could be an inconvenient in some exceptional circumstances when an urgent fix is needed
- Nevertheless, although it is no longer enforced, it is strongly recommended to merge PRs only if they have at least one approval
- [x] #5250
- So that direct pushes to main branch are no longer necessary
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I_kwDODunzps5Wcvzx
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Unable to rename columns in streaming dataset
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[
"Hi @peregilk this bug is directly related to https://github.com/huggingface/datasets/issues/3888, and still not fixed... But I'll try to have a look!",
"Thanks @alvarobartt. It is great if you are able to fix it, but when reading the explanation it seems like it is possible to work around it.\r\n\r\nWe also tried keeping the 'info.features' and then adding a modified version back after the remove/rename. Unforutunately that leads to a dataset that is not possible to iterate over.",
"So if you iterate over the `IterableDataset` as `next(iter(ds))` and then run `rename_columns` when checking that data it will work, but in the end, it's just renaming the column one example/batch at a time, not renaming the column name for all the entries in the dataset, which is the ideal.",
"@alvarobartt Thanks. My use case was that I wanted to do multiple things, ie removing all unnecessary columns, renaming some valid columns, and then using cast (in my case checking if the audio is not 16K and casting it). It is just convenient to look into the info.features between each of these operations. Alternatively, I will just plan ahead...;) To me it seems like all the operations are working.\r\n\r\nThanks for the advice. It was very useful.",
"If we know the features before renaming, then we know the features after renaming, so we can pass the new features to the returned dataset in `rename_column` indeed ! If anyone is interested in contributing, feel free to open a PR and I'd be happy to help / give some pointers :)",
"Sure @lhoestq thanks! I’ll try to work on that",
"#self-assign"
] | 2022-11-15T21:04:41
| 2022-11-28T12:53:24
| 2022-11-28T12:53:24
|
NONE
| null | null | null | null |
### Describe the bug
Trying to rename column in a streaming datasets, destroys the features object.
### Steps to reproduce the bug
The following code illustrates the error:
```
from datasets import load_dataset
dataset = load_dataset('mc4', 'en', streaming=True, split='train')
dataset.info.features
# {'text': Value(dtype='string', id=None), 'timestamp': Value(dtype='string', id=None), 'url': Value(dtype='string', id=None)}
dataset = dataset.rename_column("text", "content")
dataset.info.features
# This returned object is now None!
```
### Expected behavior
This should just alter the renamed column.
### Environment info
datasets 2.6.1
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|
Allow dataset streaming from private a private source when loading a dataset with a dataset loading script
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"Hi ! What kind of private source ? We're exploring adding support for cloud storage and URIs like s3://, gs:// etc. with authentication in the download manager",
"Hello! It's a google cloud storage, so gs://, but I'm using it with https.\r\nBeing able to provide a file system like [here](https://huggingface.co/docs/datasets/main/filesystems#load-serialized-datasets) would be even more practical indeed.\r\nI've found a quite complicated workaround which consists of monkey patching all of the functions in streaming_download_manager.py to use my own _get_authentication_headers_for_url_ . \r\n\r\nA support for this use case would be greatly appreciated!\r\n\r\nFor reference my _get_authentication_headers_for_url_ looks like this:\r\n```\r\nimport os\r\nfrom typing import Optional, Union\r\n\r\nfrom datasets import config\r\nfrom huggingface_hub import HfFolder\r\nfrom gcsfs.credentials import GoogleCredentials\r\n\r\nDEFAULT_PROJECT = os.environ.get(\"GCSFS_DEFAULT_PROJECT\", \"\")\r\naccess = \"full_control\"\r\ngcs_token = os.environ.get(\"GCS_TOKEN\")\r\n\r\n\r\ndef get_authentication_headers_for_url(url: str, use_auth_token: Optional[Union[str, bool]] = None) -> dict:\r\n \"\"\"Handle the HF authentication\"\"\"\r\n headers = {}\r\n if url.startswith(config.HF_ENDPOINT):\r\n if use_auth_token is False:\r\n token = None\r\n elif isinstance(use_auth_token, str):\r\n token = use_auth_token\r\n else:\r\n token = HfFolder.get_token()\r\n elif url.startswith(\"https://storage.googleapis.com\"):\r\n credentials = GoogleCredentials(DEFAULT_PROJECT, access, gcs_token)\r\n credentials.maybe_refresh()\r\n token = credentials.credentials.token\r\n else:\r\n token = None\r\n if token:\r\n headers[\"authorization\"] = f\"Bearer {token}\"\r\n return headers\r\n```",
"I would be a big fan of this feature! @Hubert-Bonisseur if this doesn't become a supported feature, would you mind sharing your code? Thanks!",
"> I would be a big fan of this feature! @Hubert-Bonisseur if this doesn't become a supported feature, would you mind sharing your code? Thanks!\r\n\r\nI published it here:\r\nhttps://github.com/Hubert-Bonisseur/private-dataset-hub\r\n\r\nI modified the names of a lot of functions for privacy and I don't have time to test it again so you may get import errors, but you have the code. The custom_load_dataset is the function you are interested in I think.\r\n\r\nIt relies a lot on patching, if you find a better way to do this, I'd be interested.",
"Given the amount of patching it does, this is likely to break at one point. I'd encourage you to wait for a proper support in `datasets` directly if you can wait."
] | 2022-11-15T16:02:10
| 2022-11-23T14:02:30
| null |
CONTRIBUTOR
| null | null | null | null |
### Feature request
Add arguments to the function _get_authentication_headers_for_url_ like custom_endpoint and custom_token in order to add flexibility when downloading files from a private source.
It should also be possible to provide these arguments from the dataset loading script, maybe giving them to the dl_manager
### Motivation
It is possible to share a dataset hosted on another platform by writing a dataset loading script. It works perfectly for publicly available resources.
For resources that require authentication, you can provide a [download_custom](https://huggingface.co/docs/datasets/package_reference/builder_classes#datasets.DownloadManager) method to the download_manager.
Unfortunately, this function doesn't work with **dataset streaming**.
A solution so as to allow dataset streaming from private sources would be a more flexible _get_authentication_headers_for_url_ function.
### Your contribution
Would you be interested in this improvement ?
If so I could provide a PR. I've got something working locally, but it's not very clean, I'd need some guidance regarding integration.
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Download only split data
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"Hi @capsabogdan! Unfortunately, it's hard to implement because quite often datasets data is being hosted in a single archive for all splits :( So we have to download the whole archive to split it into splits. This is the case for CommonVoice too. \r\n\r\nHowever, for cases when data is distributed in separate archives ащк different splits I suppose it can (and will) be implemented someday. \r\n\r\n\r\nBtw for quick check of the dataset you can use [streaming](https://huggingface.co/docs/datasets/stream):\r\n```python\r\ncv = load_dataset(\"mozilla-foundation/common_voice_11_0\", \"en\", split=\"test\", streaming=True)\r\ncv = iter(cv)\r\nprint(next(cv))\r\n\r\n>> {'client_id': 'a07b17f8234ded5e847443ea6f423cef745cbbc7537fb637d58326000aa751e829a21c4fd0a35fc17fb833aa7e95ebafce5efd19beeb8d843887b85e4eb35f5b',\r\n>> 'path': None,\r\n>> 'audio': {'path': 'cv-corpus-11.0-2022-09-21/en/clips/common_voice_en_100363.mp3',\r\n>> 'array': array([ 0.0000000e+00, 1.1748125e-14, 1.5450088e-14, ...,\r\n>> 1.3011958e-06, -6.3548953e-08, -9.9098514e-08], dtype=float32),\r\n>> ...}\r\n\r\n```",
"thank you for the answer but am not sure if this will not be helpful, as we\nneed maybe just 10% of the datasets for some experiment\n\ncan we get just a portion of the dataset with stream?\n\n\nis there really no solution? :(\n\nAm Di., 15. Nov. 2022 um 16:55 Uhr schrieb Polina Kazakova <\n***@***.***>:\n\n> Hi @capsabogdan <https://github.com/capsabogdan>! Unfortunately, it's\n> hard to implement because quite often datasets data is being hosted in a\n> single archive for all splits :( So we have to download the whole archive\n> to split it into splits. This is the case for CommonVoice too.\n>\n> However, for cases when data is distributed in separate archives in\n> different splits I suppose it can be implemented someday.\n>\n> Btw for quick check of the dataset you can use streaming\n> <https://huggingface.co/docs/datasets/stream>:\n>\n> cv = load_dataset(\"mozilla-foundation/common_voice_11_0\", \"en\", split=\"test\", streaming=True)cv = iter(cv)print(next(cv))\n> >> {'client_id': 'a07b17f8234ded5e847443ea6f423cef745cbbc7537fb637d58326000aa751e829a21c4fd0a35fc17fb833aa7e95ebafce5efd19beeb8d843887b85e4eb35f5b',>> 'path': None,>> 'audio': {'path': 'cv-corpus-11.0-2022-09-21/en/clips/common_voice_en_100363.mp3',>> 'array': array([ 0.0000000e+00, 1.1748125e-14, 1.5450088e-14, ...,>> 1.3011958e-06, -6.3548953e-08, -9.9098514e-08], dtype=float32),>> ...}\n>\n> —\n> Reply to this email directly, view it on GitHub\n> <https://github.com/huggingface/datasets/issues/5243#issuecomment-1315512887>,\n> or unsubscribe\n> <https://github.com/notifications/unsubscribe-auth/ALSIFOC3JYRCTH54OBRUJULWIOW6PANCNFSM6AAAAAASAYO2LY>\n> .\n> You are receiving this because you were mentioned.Message ID:\n> ***@***.***>\n>\n",
"maybe it would be nice if you guys ould do some sort of shard before\nloading the dataset, so users can download just chunks of data :)\n\nI think this would be very helpful\n\nAm Di., 15. Nov. 2022 um 19:24 Uhr schrieb Bogdan Capsa <\n***@***.***>:\n\n> thank you for the answer but am not sure if this will not be helpful, as\n> we need maybe just 10% of the datasets for some experiment\n>\n> can we get just a portion of the dataset with stream?\n>\n>\n> is there really no solution? :(\n>\n> Am Di., 15. Nov. 2022 um 16:55 Uhr schrieb Polina Kazakova <\n> ***@***.***>:\n>\n>> Hi @capsabogdan <https://github.com/capsabogdan>! Unfortunately, it's\n>> hard to implement because quite often datasets data is being hosted in a\n>> single archive for all splits :( So we have to download the whole archive\n>> to split it into splits. This is the case for CommonVoice too.\n>>\n>> However, for cases when data is distributed in separate archives in\n>> different splits I suppose it can be implemented someday.\n>>\n>> Btw for quick check of the dataset you can use streaming\n>> <https://huggingface.co/docs/datasets/stream>:\n>>\n>> cv = load_dataset(\"mozilla-foundation/common_voice_11_0\", \"en\", split=\"test\", streaming=True)cv = iter(cv)print(next(cv))\n>> >> {'client_id': 'a07b17f8234ded5e847443ea6f423cef745cbbc7537fb637d58326000aa751e829a21c4fd0a35fc17fb833aa7e95ebafce5efd19beeb8d843887b85e4eb35f5b',>> 'path': None,>> 'audio': {'path': 'cv-corpus-11.0-2022-09-21/en/clips/common_voice_en_100363.mp3',>> 'array': array([ 0.0000000e+00, 1.1748125e-14, 1.5450088e-14, ...,>> 1.3011958e-06, -6.3548953e-08, -9.9098514e-08], dtype=float32),>> ...}\n>>\n>> —\n>> Reply to this email directly, view it on GitHub\n>> <https://github.com/huggingface/datasets/issues/5243#issuecomment-1315512887>,\n>> or unsubscribe\n>> <https://github.com/notifications/unsubscribe-auth/ALSIFOC3JYRCTH54OBRUJULWIOW6PANCNFSM6AAAAAASAYO2LY>\n>> .\n>> You are receiving this because you were mentioned.Message ID:\n>> ***@***.***>\n>>\n>\n",
"+1 on this feature request - I am running into the same problem, where I only need the test set for a dataset that has a huge training set",
"Hey, I'm also interested in that as a feature. I'm having the same problem with Common Voice 13.0. The dataset is super big but I only want the test data to benchmark multilingual models, but I don't have much Terabytes to store all the dataset...",
"Consider this approach: Download and save individual audio files by streaming each split, then compile a CSV file that contains the file names and corresponding text.\r\n\r\n```python3\r\nimport os\r\nimport shutil\r\nfrom pathlib import Path\r\n\r\nimport datasets\r\nimport pandas as pd\r\nimport soundfile\r\nfrom datasets import Dataset, concatenate_datasets, load_dataset\r\n\r\n\r\ndataset = load_dataset(\"librispeech_asr\", 'clean', split=\"train.100\", streaming=True)\r\ndataset = iter(dataset)\r\n\r\ndownload_path = os.path.join(os.getcwd(), 'librispeech', 'clips')\r\ncsv_name = os.path.join(os.getcwd(), 'librispeech', 'clean_train_100.csv')\r\n\r\nrows = []\r\nfor i, row in enumerate(dataset):\r\n print(i)\r\n path = os.path.join(download_path, row['audio']['path'])\r\n soundfile.write(path, row['audio']['array'], row['audio']['sampling_rate'])\r\n\r\n del row['audio']\r\n rows.append(row)\r\n\r\ndf = pd.DataFrame(rows)\r\ndf.to_csv(csv_name, index=False, header=True)\r\n```",
"Faced this issue as well so wrote a short script that pulls a hub dataset, creates a small sample of it, and pushes the sample data to the hub as a new dataset.\n\n```python\ndef create_sample_dataset(full_dataset_name, sample_count=100, username=\"my-username\", cache_dir=\"./dataset\"):\n # Create a directory to save the sampled dataset\n os.makedirs(cache_dir, exist_ok=True)\n\n # Get the dataset name\n dataset_name = full_dataset_name.split(\"/\")[-1]\n dataset_name_sample = f\"{dataset_name}-sample-{sample_count}\"\n\n # Load the dataset\n dataset = datasets.load_dataset(full_dataset_name, cache_dir=cache_dir)\n\n # Sample 100 rows from the training split (or modify for other splits)\n train_sample = dataset[\"train\"].shuffle(seed=42).select(range(sample_count))\n test_sample = dataset[\"test\"].shuffle(seed=42).select(range(sample_count))\n\n # Push to hub\n train_sample.push_to_hub(dataset_name_sample, split=\"train\")\n print(\"INFO: Train split pushed to the hub successfully\")\n\n test_sample.push_to_hub(dataset_name_sample, split=\"test\")\n print(\"INFO: Test split pushed to the hub successfully\")\n```\n\nOnce sampled / pushed you have a smaller version of your dataset in the hub to pull from.\n\nThe [full gist is here](https://gist.github.com/neonwatty/2205277501928f5945726e9e90950ae9)."
] | 2022-11-15T10:15:54
| 2025-02-25T14:47:03
| null |
NONE
| null | null | null | null |
### Feature request
Is it possible to download only the data that I am requesting and not the entire dataset? I run out of disk spaceas it seems to download the entire dataset, instead of only the part needed.
common_voice["test"] = load_dataset("mozilla-foundation/common_voice_11_0", "en", split="test",
cache_dir="cache/path...",
use_auth_token=True,
download_config=DownloadConfig(delete_extracted='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')
)
### Motivation
efficiency improvement
### Your contribution
n/a
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Failed Data Processing upon upload with zip file full of images
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"cc @abhishekkrthakur @SBrandeis "
] | 2022-11-15T02:47:52
| 2022-11-15T17:59:23
| null |
NONE
| null | null | null | null |
I went to autotrain and under image classification arrived where it was time to prepare my dataset. Screenshot below
I chose the method 2 option. I have a csv file with two columns. ~23,000 files.
I uploaded this and chose the image_relpath, and target columns.
The image uploader said that I could only upload 10,000 singular images at a time so the 2nd option was to zip the images up and upload a zip archive which I did.
That all uploaded.
Now I have the message below. It appears the zip archive does just uncompress on the Hugging Face end?
What am I missing here?
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Incompatible dill versions in datasets 2.6.1
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[
"Thanks for reporting, @vinaykakade.\r\n\r\nWe are discussing about making a release early this week.\r\n\r\nPlease note that in the meantime, in your specific case (as we also pointed out here: https://github.com/huggingface/datasets/issues/5162#issuecomment-1291720293), you can circumvent the issue by pinning `multiprocess` to 0.70.13 version (instead of using latest 0.70.14).\r\n\r\nDuplicate of:\r\n- https://github.com/huggingface/datasets/issues/5162",
"You can also make `pip-compile` work by using the backtracking resolver (instead of the legacy one): https://pip-tools.readthedocs.io/en/latest/#a-note-on-resolvers\r\n```\r\npip-compile --resolver=backtracking requirements.in\r\n```\r\nThis resolver will automatically use `multiprocess` 0.70.13 version.\r\n"
] | 2022-11-12T06:46:23
| 2022-11-14T08:24:43
| 2022-11-14T08:07:59
|
NONE
| null | null | null | null |
### Describe the bug
datasets version 2.6.1 has a dependency on dill<0.3.6. This causes a conflict with dill>=0.3.6 used by multiprocess dependency in datasets 2.6.1
This issue is already fixed in https://github.com/huggingface/datasets/pull/5166/files, but not yet been released. Please release a new version of the datasets library to fix this.
### Steps to reproduce the bug
1. Create requirements.in with only dependency being datasets (or datasets[s3])
2. Run pip-compile
3. The output is as follows:
```
Could not find a version that matches dill<0.3.6,>=0.3.6 (from datasets[s3]==2.6.1->-r requirements.in (line 1))
Tried: 0.2, 0.2, 0.2.1, 0.2.1, 0.2.2, 0.2.2, 0.2.3, 0.2.3, 0.2.4, 0.2.4, 0.2.5, 0.2.5, 0.2.6, 0.2.7, 0.2.7.1, 0.2.8, 0.2.8.1, 0.2.8.2, 0.2.9, 0.3.0, 0.3.1, 0.3.1.1, 0.3.2, 0.3.3, 0.3.3, 0.3.4, 0.3.4, 0.3.5, 0.3.5, 0.3.5.1, 0.3.5.1, 0.3.6, 0.3.6
Skipped pre-versions: 0.1a1, 0.2a1, 0.2a1, 0.2b1, 0.2b1
There are incompatible versions in the resolved dependencies:
dill<0.3.6 (from datasets[s3]==2.6.1->-r requirements.in (line 1))
dill>=0.3.6 (from multiprocess==0.70.14->datasets[s3]==2.6.1->-r requirements.in (line 1))
```
### Expected behavior
pip-compile produces requirements.txt without any conflicts
### Environment info
datasets version 2.6.1
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I_kwDODunzps5WLm2D
| 5,231
|
Using `set_format(type='torch', columns=columns)` makes Array2D/3D columns stop formatting correctly
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[
"In case others find this, the problem was not with set_format, but my usages of `to_pandas()` and `from_pandas()` which I was using during dataset splitting; somewhere in the chain of converting to and from pandas the `Array2D/Array3D` types get converted to series of `Sequence()` types"
] | 2022-11-11T18:54:36
| 2022-11-11T20:42:29
| 2022-11-11T18:59:50
|
NONE
| null | null | null | null |
I have a Dataset with two Features defined as follows:
```
'image': Array3D(dtype="int64", shape=(3, 224, 224)),
'bbox': Array2D(dtype="int64", shape=(512, 4)),
```
On said dataset, if I `dataset.set_format(type='torch')` and then use the dataset in a dataloader, these columns are correctly cast to Tensors of (batch_size, 3, 224, 244) for example.
However, if I `dataset.set_format(type='torch', columns=['image', 'bbox'])` these columns are cast to Lists of tensors and miss the batch size completely (the 3 dimension is the list length).
I'm currently digging through datasets formatting code to try and find out why, but was curious if someone knew an immediate solution for this.
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I_kwDODunzps5WKLH8
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dataclasses error when importing the library in python 3.11
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[
"I opened [this issue](https://github.com/python/cpython/issues/99401).\r\nPython's maintainers say that the issue is caused by [this change](https://docs.python.org/3.11/whatsnew/3.11.html#dataclasses).\r\nI believe adding a `__hash__` method to `datasets.utils.version.Version` should solve (at least partially) this issue.",
"Has this been fixed? I am running into this issue now. \r\n\r\nIf this has been fixed, could have a new release with this?\r\n",
"Hi, I am getting error while training \r\n\r\n(tensorflow) C:\\tensorflow\\models\\research\\object_detection>python train.py --logtostderr --train_dir=training/ --pipeline_config_path=training/faster_rcnn_inception_v2_pets.config\r\nTraceback (most recent call last):\r\n File \"C:\\tensorflow\\models\\research\\object_detection\\train.py\", line 54, in <module>\r\n from object_detection.legacy import trainer\r\n File \"C:\\tensorflow\\models\\research\\object_detection\\legacy\\trainer.py\", line 27, in <module>\r\n from object_detection.builders import optimizer_builder\r\n File \"C:\\tensorflow\\models\\research\\object_detection\\builders\\optimizer_builder.py\", line 25, in <module>\r\n from official.modeling.optimization import ema_optimizer\r\n File \"C:\\tensorflow\\models\\official\\modeling\\optimization\\__init__.py\", line 19, in <module>\r\n from official.modeling.optimization.configs.optimization_config import *\r\n File \"C:\\tensorflow\\models\\official\\modeling\\optimization\\configs\\optimization_config.py\", line 31, in <module>\r\n @dataclasses.dataclass\r\n ^^^^^^^^^^^^^^^^^^^^^\r\n File \"C:\\Users\\x0133252\\AppData\\Local\\anaconda3\\envs\\tensorflow\\Lib\\dataclasses.py\", line 1223, in dataclass\r\n return wrap(cls)\r\n ^^^^^^^^^\r\n File \"C:\\Users\\x0133252\\AppData\\Local\\anaconda3\\envs\\tensorflow\\Lib\\dataclasses.py\", line 1213, in wrap\r\n return _process_class(cls, init, repr, eq, order, unsafe_hash,\r\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"C:\\Users\\x0133252\\AppData\\Local\\anaconda3\\envs\\tensorflow\\Lib\\dataclasses.py\", line 958, in _process_class\r\n cls_fields.append(_get_field(cls, name, type, kw_only))\r\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\r\n File \"C:\\Users\\x0133252\\AppData\\Local\\anaconda3\\envs\\tensorflow\\Lib\\dataclasses.py\", line 815, in _get_field\r\n raise ValueError(f'mutable default {type(f.default)} for field '\r\nValueError: mutable default <class 'official.modeling.optimization.configs.optimizer_config.SGDConfig'> for field sgd is not allowed: use default_factory",
"@Jayanth1812 and anyone else receiving a similar issue, it most likely has to do with your Python version. Downgrading to Python 3.9 works for me, but doing a downgrade might impact a lot of things. So to be safe and what worked for me was creating a new conda environment and following the installations here: https://tensorflow-object-detection-api-tutorial.readthedocs.io/en/latest/install.html\r\n\r\nAnd for Tensorflow GPU compatibility, after installing TensorFlow follow the instructions in section 4 'GPU Setup' in this document: https://www.tensorflow.org/install/pip",
"@Jayanth1812, you can see in your error stack trace, that the error is caused by the `tensorflow` library, not by the `datasets` library. See:\r\n```\r\nFile \"C:\\Users\\x0133252\\AppData\\Local\\anaconda3\\envs\\tensorflow\\Lib\\dataclasses.py\"\r\n```\r\n\r\nYou should open an issue in their repository instead: https://github.com/tensorflow/tensorflow "
] | 2022-11-11T13:53:49
| 2023-05-25T04:37:05
| 2022-11-14T15:27:37
|
NONE
| null | null | null | null |
### Describe the bug
When I import datasets using python 3.11 the dataclasses standard library raises the following error:
`ValueError: mutable default <class 'datasets.utils.version.Version'> for field version is not allowed: use default_factory`
When I tried to import the library using the following jupyter notebook:
```
%%bash
# create python 3.11 conda env
conda create --yes --quiet -n myenv -c conda-forge python=3.11
# activate is
source activate myenv
# install pyarrow
/opt/conda/envs/myenv/bin/python -m pip install --quiet --extra-index-url https://pypi.fury.io/arrow-nightlies/ \
--prefer-binary --pre pyarrow
# install datasets
/opt/conda/envs/myenv/bin/python -m pip install --quiet datasets
```
```
# create a python file that only imports datasets
with open("import_datasets.py", 'w') as f:
f.write("import datasets")
# run it with the env
!/opt/conda/envs/myenv/bin/python import_datasets.py
```
I get the following error:
```
Traceback (most recent call last):
File "/kaggle/working/import_datasets.py", line 1, in <module>
import datasets
File "/opt/conda/envs/myenv/lib/python3.11/site-packages/datasets/__init__.py", line 45, in <module>
from .builder import ArrowBasedBuilder, BeamBasedBuilder, BuilderConfig, DatasetBuilder, GeneratorBasedBuilder
File "/opt/conda/envs/myenv/lib/python3.11/site-packages/datasets/builder.py", line 91, in <module>
@dataclass
^^^^^^^^^
File "/opt/conda/envs/myenv/lib/python3.11/dataclasses.py", line 1221, in dataclass
return wrap(cls)
^^^^^^^^^
File "/opt/conda/envs/myenv/lib/python3.11/dataclasses.py", line 1211, in wrap
return _process_class(cls, init, repr, eq, order, unsafe_hash,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/conda/envs/myenv/lib/python3.11/dataclasses.py", line 959, in _process_class
cls_fields.append(_get_field(cls, name, type, kw_only))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/conda/envs/myenv/lib/python3.11/dataclasses.py", line 816, in _get_field
raise ValueError(f'mutable default {type(f.default)} for field '
ValueError: mutable default <class 'datasets.utils.version.Version'> for field version is not allowed: use default_factory
```
This is probably due to one of the following changes in the [dataclasses standard library](https://docs.python.org/3/library/dataclasses.html) in version 3.11:
1. Changed in version 3.11: Instead of looking for and disallowing objects of type list, dict, or set, unhashable objects are now not allowed as default values. Unhashability is used to approximate mutability.
2. fields may optionally specify a default value, using normal Python syntax:
```
@dataclass
class C:
a: int # 'a' has no default value
b: int = 0 # assign a default value for 'b'
In this example, both a and b will be included in the added __init__() method, which will be defined as:
def __init__(self, a: int, b: int = 0):
```
3. Changed in version 3.11: If a field name is already included in the __slots__ of a base class, it will not be included in the generated __slots__ to prevent [overriding them](https://docs.python.org/3/reference/datamodel.html#datamodel-note-slots). Therefore, do not use __slots__ to retrieve the field names of a dataclass. Use [fields()](https://docs.python.org/3/library/dataclasses.html#dataclasses.fields) instead. To be able to determine inherited slots, base class __slots__ may be any iterable, but not an iterator.
4. weakref_slot: If true (the default is False), add a slot named “__weakref__”, which is required to make an instance weakref-able. It is an error to specify weakref_slot=True without also specifying slots=True.
[TypeError](https://docs.python.org/3/library/exceptions.html#TypeError) will be raised if a field without a default value follows a field with a default value. This is true whether this occurs in a single class, or as a result of class inheritance.
### Steps to reproduce the bug
Steps to reproduce the behavior:
1. go to [the notebook in kaggle](https://www.kaggle.com/yonikremer/repreducing-issue)
2. rub both of the cells
### Expected behavior
I'm expecting no issues.
This error should not occur.
### Environment info
kaggle kernels, with default settings:
pin to original environment, no accelerator.
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I_kwDODunzps5WIswE
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Type error when calling `map` over dataset containing 0-d tensors
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"Hi! \r\n\r\nWe could address this by calling `.item()` on such tensors to extract the value, but this would lose us the type, which could lead to storing the generated dataset in a suboptimal format. Considering this, I think the only proper fix would be implementing support for 0-D tensors on Apache Arrow's side (Arrow is the underlying format we use to store datasets on disk/in memory). WDYT @lhoestq?",
"I think we can just convert the item to a numpy typed scalar using `.numpy()` ?\r\n\r\nFor example this works:\r\n```python\r\nimport numpy as np\r\nimport pyarrow as pa\r\n\r\nassert pa.array([np.float64(1.0)]).type == pa.float64()\r\nassert pa.array([np.float32(1.0)]).type == pa.float32()\r\nassert pa.array([np.int32(1)]).type == pa.int32()\r\nassert pa.array([np.int64(1)]).type == pa.int64()\r\n```\r\n\r\nAnd therefore it would work the same as for PyTorch N-D Tensors: convert to Numpy Array to keep the type in `_cast_to_python_objects`, then convert to Arrow"
] | 2022-11-11T08:27:28
| 2023-01-13T16:00:53
| 2023-01-13T16:00:53
|
NONE
| null | null | null | null |
### Describe the bug
0-dimensional tensors in a dataset lead to `TypeError: iteration over a 0-d array` when calling `map`. It is easy to generate such tensors by using `.with_format("...")` on the whole dataset.
### Steps to reproduce the bug
```
ds = datasets.Dataset.from_list([{"a": 1}, {"a": 1}]).with_format("torch")
ds.map(None)
```
### Expected behavior
Getting back `ds` without errors.
### Environment info
Python 3.10.8
datasets 2.6.
torch 1.13.0
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I_kwDODunzps5WHVXh
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|
Loading a dataset from the hub fails if you happen to have a folder of the same name
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"`load_dataset` first checks for a local directory before checking for the Hub.\r\n\r\nTo make it explicit that it has to fetch the Hub, we could support the `hffs` syntax:\r\n```python\r\nload_dataset(\"hf://datasets/glue\")\r\n```\r\n\r\nwould that work for you ? Also cc @mariosasko who's leading the `hffs` project",
"yeah, that would be a fine solution.",
"This still has no proper solution in 2.11\r\n\r\nperhaps have a `download_config=\"force_remote\"` or just backtrack once you reach `EmptyDatasetError` locally and then try to load it from the hub (or a local cache, as that only gets checked if there is no local folder...?)"
] | 2022-11-11T00:51:54
| 2023-05-03T23:23:04
| null |
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
I'm not 100% sure this should be considered a bug, but it was certainly annoying to figure out the cause of. And perhaps I am just missing a specific argument needed to avoid this conflict. Basically I had a situation where multiple workers were downloading different parts of the glue dataset and then training on them. Additionally, they were writing their checkpoints to a folder called `glue`. This meant that once one worker had created the `glue` folder to write checkpoints to, the next worker to try to load a glue dataset would fail as shown in the minimal repro below. I'm not sure what the solution would be since I'm not super familiar with the `datasets` code, but I would expect `load_dataset` to not crash just because i have a local folder with the same name as a dataset from the hub.
### Steps to reproduce the bug
```
In [1]: import datasets
In [2]: rte = datasets.load_dataset('glue', 'rte')
Downloading and preparing dataset glue/rte to /Users/danielking/.cache/huggingface/datasets/glue/rte/1.0.0/dacbe3125aa31d7f70367a07a8a9e72a5a0bfeb5fc42e75c9db75b96da6053ad...
Downloading data: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 697k/697k [00:00<00:00, 6.08MB/s]
Dataset glue downloaded and prepared to /Users/danielking/.cache/huggingface/datasets/glue/rte/1.0.0/dacbe3125aa31d7f70367a07a8a9e72a5a0bfeb5fc42e75c9db75b96da6053ad. Subsequent calls will reuse this data.
100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 3/3 [00:00<00:00, 773.81it/s]
In [3]: import os
In [4]: os.mkdir('glue')
In [5]: rte = datasets.load_dataset('glue', 'rte')
---------------------------------------------------------------------------
EmptyDatasetError Traceback (most recent call last)
<ipython-input-5-0d6b9ad8bbd0> in <cell line: 1>()
----> 1 rte = datasets.load_dataset('glue', 'rte')
~/miniconda3/envs/composer/lib/python3.9/site-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, **config_kwargs)
1717
1718 # Create a dataset builder
-> 1719 builder_instance = load_dataset_builder(
1720 path=path,
1721 name=name,
~/miniconda3/envs/composer/lib/python3.9/site-packages/datasets/load.py in load_dataset_builder(path, name, data_dir, data_files, cache_dir, features, download_config, download_mode, revision, use_auth_token, **config_kwargs)
1495 download_config = download_config.copy() if download_config else DownloadConfig()
1496 download_config.use_auth_token = use_auth_token
-> 1497 dataset_module = dataset_module_factory(
1498 path,
1499 revision=revision,
~/miniconda3/envs/composer/lib/python3.9/site-packages/datasets/load.py in dataset_module_factory(path, revision, download_config, download_mode, dynamic_modules_path, data_dir, data_files, **download_kwargs)
1152 ).get_module()
1153 elif os.path.isdir(path):
-> 1154 return LocalDatasetModuleFactoryWithoutScript(
1155 path, data_dir=data_dir, data_files=data_files, download_mode=download_mode
1156 ).get_module()
~/miniconda3/envs/composer/lib/python3.9/site-packages/datasets/load.py in get_module(self)
624 base_path = os.path.join(self.path, self.data_dir) if self.data_dir else self.path
625 patterns = (
--> 626 sanitize_patterns(self.data_files) if self.data_files is not None else get_data_patterns_locally(base_path)
627 )
628 data_files = DataFilesDict.from_local_or_remote(
~/miniconda3/envs/composer/lib/python3.9/site-packages/datasets/data_files.py in get_data_patterns_locally(base_path)
458 return _get_data_files_patterns(resolver)
459 except FileNotFoundError:
--> 460 raise EmptyDatasetError(f"The directory at {base_path} doesn't contain any data files") from None
461
462
EmptyDatasetError: The directory at glue doesn't contain any data files
```
### Expected behavior
Dataset is still able to be loaded from the hub even if I have a local folder with the same name.
### Environment info
datasets version: 2.6.1
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I_kwDODunzps5WGyc-
| 5,227
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datasets.data_files.EmptyDatasetError: The directory at wikisql doesn't contain any data files
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[
"Fixed. Please close.",
"how to fix?i need your help"
] | 2022-11-10T21:57:06
| 2023-10-07T05:04:41
| 2022-11-10T22:05:43
|
NONE
| null | null | null | null |
### Describe the bug
From these lines:
from datasets import list_datasets, load_dataset
dataset = load_dataset("wikisql","binary")
I get error message:
datasets.data_files.EmptyDatasetError: The directory at wikisql doesn't contain any data files
And yet the 'wikisql' is reported to exist via the list_datasets().
Any help appreciated.
### Steps to reproduce the bug
From these lines:
from datasets import list_datasets, load_dataset
dataset = load_dataset("wikisql","binary")
I get error message:
datasets.data_files.EmptyDatasetError: The directory at wikisql doesn't contain any data files
And yet the 'wikisql' is reported to exist via the list_datasets().
Any help appreciated.
### Expected behavior
Dataset should load. This same code used to work.
### Environment info
Mac OS
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|
Q: Memory release when removing the column?
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[
"Hi ! Datasets are memory mapped from your disk, i.e. they're not loaded in RAM. This is possible thanks to the Arrow data format.\r\n\r\nTherefore the column you remove is not in RAM, so removing it doesn't cause the RAM to decrease.",
"Thanks for the explanation! @lhoestq \r\nI wonder since it is memory mapped, can we reduce or remove this memory map?",
"Yes you can `del common_voice` for example or wait for it to be garbage collected"
] | 2022-11-10T18:35:27
| 2022-11-29T15:10:10
| 2022-11-29T15:10:10
|
NONE
| null | null | null | null |
### Describe the bug
How do I release memory when I use methods like `.remove_columns()` or `clear()` in notebooks?
```python
from datasets import load_dataset
common_voice = load_dataset("mozilla-foundation/common_voice_11_0", "ja", use_auth_token=True)
# check memory -> RAM Used (GB): 0.704 / Total (GB) 33.670
common_voice = common_voice.remove_columns(column_names=common_voice.column_names['train'])
common_voice.clear()
# check memory -> RAM Used (GB): 0.705 / Total (GB) 33.670
```
I tried `gc.collect()` but did not help
### Steps to reproduce the bug
1. load dataset
2. remove all the columns
3. check memory is reduced or not
[link to reproduce](https://www.kaggle.com/code/bayartsogtya/huggingface-dataset-memory-issue/notebook?scriptVersionId=110630567)
### Expected behavior
Memory released when I remove the column
### Environment info
- `datasets` version: 2.1.0
- Platform: Linux-5.15.65+-x86_64-with-debian-bullseye-sid
- Python version: 3.7.12
- PyArrow version: 8.0.0
- Pandas version: 1.3.5
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Add video feature
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"@NielsRogge @rwightman may have additional requirements regarding this feature.\r\n\r\nWhen adding a new (decodable) type, the hardest part is choosing the right decoding library. What I mean by \"right\" here is that it has all the features we need and is easy to install (with GPU support?).\r\n\r\nSome candidates/options:\r\n* [`decord`](https://github.com/dmlc/decord): no longer [maintained](https://github.com/dmlc/decord/issues/214), not trivial to install with GPU support\r\n* [`pyAV`](https://github.com/PyAV-Org/PyAV): used for CPU decoding in `torchvision`, GPU decoding not supported if I'm not mistaken, otherwise the best candidate probably\r\n* [`video_reader`](https://github.com/pytorch/vision/blob/de350bc01ad2193ea2888f0ce8a6a346d3cba5a9/torchvision/csrc/io/video_reader/video_reader.cpp): used for GPU decoding in `torchvision`, depends on `torch'\r\n* OpenCV: uses `ffmpeg` for video decoding under the hood\r\n* ...\r\n\r\nAnd the last resort is building our own library, which is the most flexible solution but also requires the most work.\r\n\r\nPS: I'm adding a link to an article that compares various video decoding libraries: https://towardsdatascience.com/lightning-fast-video-reading-in-python-c1438771c4e6",
"@mariosasko is GPU decoding a hard requirement here? Do we really need it? (I don't know)\r\n\r\nSomething to consider with `decord` is that it doesn't (AFAIK) support writing videos, so you'd still need something else for that. also I've noticed [issues](https://github.com/dmlc/decord/issues/242) with decord's ability to decode stereo audio streams along side the video (which you don't run into with PyAV).\r\n\r\n---\r\n\r\nI think PyAV should be able to do the job just fine to start. If we write the video io utilities as their own functions, we can hot swap them later if we find/write a different solution that's faster/better.",
"Video is still a bit of a mess, but I'd say pyAV is likely the best approach (or supporting all three via pytorchvideo, but that adds a middle man dependency).\r\n\r\nBeing able to decode on the GPU, into memory that could be passed off to a Tensor in whatever framework is being used would be the dream, I don't think there is any interop of that nature working right now. Number of decoder instances per GPU is limited so it's not clear if balancing load btw GPU decoders and CPUs would be needed in say large scale video training.\r\n\r\nAny of these solutions is less than ideal due to the nature of video, having a simple Python interface video / start -> end results in lots of extra memory (you need to decode whole range of the clips into a buffer before using anything). Any scalable video system would be streaming on the fly (issuing frames via callbacks as soon as the stream is far enough along to have re-ordered the frames and synced audio+video+other metadata (sensors, CC, etc).\r\n\r\n",
"For standalone usage, decoding on GPU could be ideal but isn't async processing of inputs on CPUs while letting the accelerator busy for training the de-facto? Of course, I am aware of other advanced mechanisms such as CPU offloading, but I think my point is conveyed. ",
"Here's a minimal implementation of the helper functions we'd need from PyAV, a lot of which I borrowed from `pytorchvideo`, stripping out the `torch` specific stuff:\r\n\r\n[](https://colab.research.google.com/gist/nateraw/c327cb6ff6b074e6ddc8068d19c0367d/pyav-io.ipynb)\r\n \r\nIt's not too much code...@mariosasko we could probably just maintain these helper fns within the `datasets` library, right? ",
"Also wanted to note I added a PR for video classification in `transformers` here, which uses `decord`. It's still open...should we make a decision now to align the libraries we are using between `datasets` and `transformers`? (CC @Narsil )\r\n\r\nhttps://github.com/huggingface/transformers/pull/20151",
"Fully agree on at least trying to unite things.\r\n\r\nMaking clear function boundaries to help us change dependency if needed seems like a good idea since there doesn't seem to be a clear winner.\r\n\r\nI also happen to like directly calling ffmpeg. For some reason it was a lot faster than pyav. "
] | 2022-11-10T17:36:11
| 2022-12-02T15:13:15
| null |
CONTRIBUTOR
| null | null | null | null |
### Feature request
Add a `Video` feature to the library so folks can include videos in their datasets.
### Motivation
Being able to load Video data would be quite helpful. However, there are some challenges when it comes to videos:
1. Videos, unlike images, can end up being extremely large files
2. Often times when training video models, you need to do some very specific sampling. Videos might end up needing to be broken down into X number of clips used for training/inference
3. Videos have an additional audio stream, which must be accounted for
4. The feature needs to be able to encode/decode videos (with right video settings) from bytes.
### Your contribution
I did work on this a while back in [this (now closed) PR](https://github.com/huggingface/datasets/pull/4532). It used a library I made called [encoded_video](https://github.com/nateraw/encoded-video), which is basically the utils from [pytorchvideo](https://github.com/facebookresearch/pytorchvideo), but without the `torch` dep. It included the ability to read/write from bytes, as we need to do here. We don't want to be using a sketchy library that I made as a dependency in this repo, though.
Would love to use this issue as a place to:
- brainstorm ideas on how to do this right
- list ways/examples to work around it for now
CC @sayakpaul @mariosasko @fcakyon
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Seems to freeze when loading audio dataset with wav files from local folder
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[
"I just tried to do the same but changing the `.wav` files to `.mp3` files and that doesn't fix it.",
"I don't know if anyone will ever read this but I've tried to upload the same dataset with google colab and the output seems more clarifying. I didn't specify the train/test split so the dataset wasn't fully uploaded (or that is what I understood, might be wrong!!).\r\n\r\nNow, including the `drop_metadata` flag I can load the dataset normally (at least with colab notebook):\r\n\r\n```python\r\nfrom datasets import load_dataset\r\n\r\ndataset = load_dataset(\"audiofolder\", data_dir=\"../archive/Dataset\", , drop_metadata=True)\r\n```\r\n\r\nI'll close the issue.",
"@uriii3 Hello, I understand correctly that you converted your wav files to mp3?",
"Yes but it didn't matter. I don't remember which of them I ended up working with."
] | 2022-11-10T10:29:31
| 2023-04-25T09:54:05
| 2022-11-22T11:24:19
|
NONE
| null | null | null | null |
### Describe the bug
I'm following the instructions in [https://huggingface.co/docs/datasets/audio_load#audiofolder-with-metadata](url) to be able to load a dataset from a local folder.
I have everything into a folder, into a train folder and then the audios and csv. When I try to load the dataset and run from terminal, seems to work but then freezes with no apparent reason.
The metadata.csv file contains a few columns but the important ones, `file_name` with the filename and `transcription` with the transcription are okay.
The audios are `.wav` files, I don't know if that might be the problem (I will proceed to try to change them all to `.mp3` and try again).
### Steps to reproduce the bug
The code I'm using:
```python
from datasets import load_dataset
dataset = load_dataset("audiofolder", data_dir="../archive/Dataset")
dataset[0]["audio"]
```
The output I obtain:
```
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 311135.43it/s]
Using custom data configuration default-38d4546ffd010f3e
Downloading and preparing dataset audiofolder/default to /Users/mine/.cache/huggingface/datasets/audiofolder/default-38d4546ffd010f3e/0.0.0/6cbdd16f8688354c63b4e2a36e1585d05de285023ee6443ffd71c4182055c0fc...
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 166467.72it/s]
Using custom data configuration default-38d4546ffd010f3e
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 187772.74it/s]
Using custom data configuration default-38d4546ffd010f3e
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 59623.71it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 138090.55it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 106065.64it/s]
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 56036.38it/s]
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 74004.24it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 162343.45it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 101881.23it/s]
Using custom data configuration default-38d4546ffd010f3e
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 60145.67it/s]
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 80890.02it/s]
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 54036.67it/s]
Resolving data files: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 95851.09it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 155897.00it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 137656.96it/s]
Resolving data files: 100%|█████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 439/439 [00:00<00:00, 131230.81it/s]
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
Using custom data configuration default-38d4546ffd010f3e
```
And then here it just freezes and nothing more happens.
### Expected behavior
Load the dataset.
### Environment info
Datasets version:
datasets 2.6.1 pypi_0 pypi
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HuggingFace website is incorrectly reporting that my datasets are pickled
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[
"cc @McPatate maybe you know what's happening ?",
"Yes I think I know what is happening. We check in zips for pickles, and the UI must display the pickle jar when a scan has an associated list of imports, even when empty.\r\n~I'll fix ASAP !~",
"> I'll fix ASAP !\r\n\r\nActually I'd rather leave it like that for now, as it indicates that we checked for pickles and nothing dangerous appeared :)",
"Closing the issue with the typical \"feature not a bug\" "
] | 2022-11-09T16:41:16
| 2022-11-09T18:10:46
| 2022-11-09T18:06:57
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
HuggingFace is incorrectly reporting that my datasets are pickled. They are not picked, they are simple ZIP files containing PNG images.
Hopefully this is the right location to report this bug.
### Steps to reproduce the bug
Inspect my dataset respository here: https://huggingface.co/datasets/ProGamerGov/StableDiffusion-v1-5-Regularization-Images
### Expected behavior
They should not be reported as being pickled.
### Environment info
N/A
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Cannot push
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[
"Did you run `huggingface-cli lfs-enable-largefiles` before committing or before adding ? Maybe you can try before adding\r\n\r\nAnyway I'd encourage you to split your data into several TAR archives if possible, this way the dataset can loaded faster using multiprocessing (by giving each process a subset of shards to process)",
"@lhoestq \r\nThanks for the help!\r\n> Maybe you can try before adding\r\n\r\nIt did not help\r\n\r\nBut I totally got your point about split into multiple TAR archives. It really helped!"
] | 2022-11-09T15:32:05
| 2022-11-10T18:11:21
| 2022-11-10T18:11:11
|
NONE
| null | null | null | null |
### Describe the bug
I am facing the issue when I try to push the tar.gz file around 11G to HUB.
```
(venv) ╭─laptop@laptop ~/PersonalProjects/data/ulaanbal_v0 ‹main●›
╰─$ du -sh *
4.0K README.md
13G data
516K test.jsonl
18M train.jsonl
4.0K ulaanbal_v0.py
11G ulaanbal_v0.tar.gz
452K validation.jsonl
(venv) ╭─laptop@laptop~/PersonalProjects/data/ulaanbal_v0 ‹main●›
╰─$ git add ulaanbal_v0.tar.gz && git commit -m 'large version'
(venv) ╭─laptop@laptop ~/PersonalProjects/data/ulaanbal_v0 ‹main●›
╰─$ git push
EOFoading LFS objects: 0% (0/1), 0 B | 0 B/s
Uploading LFS objects: 0% (0/1), 0 B | 0 B/s, done.
error: failed to push some refs to 'https://huggingface.co/datasets/bayartsogt/ulaanbal_v0'
```
I have already tried pushing a small version of this and it was working fine. So my guess it is probably because of the big file.
Following I run before the commit:
```
╰─$ git lfs install
╰─$ huggingface-cli lfs-enable-largefiles .
```
### Steps to reproduce the bug
Create a private dataset on huggingface and push 12G tar.gz file
### Expected behavior
To be pushed with no issue
### Environment info
- `datasets` version: 2.6.1
- Platform: Darwin-21.6.0-x86_64-i386-64bit
- Python version: 3.7.11
- PyArrow version: 10.0.0
- Pandas version: 1.3.5
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I_kwDODunzps5V7g15
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Implicit type conversion of lists in to_pandas
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[
"I think this behavior comes from PyArrow:\r\n```python\r\nimport pyarrow as pa\r\nt = pa.table({\"a\": [[0]]})\r\nt.to_pandas().a.values[0]\r\n# array([0])\r\n```\r\n\r\nI believe this has to do with zero-copy: you can get a pandas DataFrame without copying the buffers from arrow, and therefore end up with numpy arrays.",
"That's interesting, I guess not much to do here then."
] | 2022-11-09T08:40:18
| 2022-11-10T16:12:26
| 2022-11-10T16:12:26
|
CONTRIBUTOR
| null | null | null | null |
### Describe the bug
```
ds = Dataset.from_list([{'a':[1,2,3]}])
ds.to_pandas().a.values[0]
```
Results in `array([1, 2, 3])` -- a rather unexpected conversion of types which made downstream tools expecting lists not happy.
### Steps to reproduce the bug
See snippet
### Expected behavior
Keep the original type
### Environment info
datasets 2.6.1
python 3.8.10
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I_kwDODunzps5V59Hm
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Delta Tables usage using Datasets Library
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[
"Hi ! Interesting :) Can you provide concrete examples of cases where it can be useful ?",
"Few example blogs and posts that might help on this - \r\n\r\n1. https://hevodata.com/learn/databricks-delta-tables/\r\n2. https://docs.databricks.com/delta/index.html\r\n\r\nBasically, we are looking at utility of Datasets library with Delta Lake Tables.\r\n",
"`datasets` can already read/write from parquet from/to a cloud storage using fsspec, if I understand correctly it's should be possible to load parquet files as delat lake tables no ? :) Or is there someting missing ?",
"@lhoestq Per my understanding, delta lake table is a bunch of paruqet files together with the meta to support ACID. For example file 1 contains v0.1 of record A while file 2 contains v0.2 of record A. I am assuming the Hugging face dataset would delegate the read/write delta table to 3rd party lib, maybe pyarrow. Correct me if I was wrong @reichenbch \r\n\r\nAnd I am assuming, people are asking the versioning of Hugging face datasets. But I am assuming Hugging face delegate this function to github and it is not the key requirement for Public Data set. It actually the key function of ML Ops, I am not sure whether hugging face would like expand to that area."
] | 2022-11-09T02:43:56
| 2023-03-02T19:29:12
| null |
NONE
| null | null | null | null |
### Feature request
Adding compatibility of Datasets library with Delta Format. Elevating the utilities of Datasets library from Machine Learning Scope to Data Engineering Scope as well.
### Motivation
We know datasets library can absorb csv, json, parquet, etc. file formats but it would be great if Datasets library could work with Delta Tables (with delta format) as it has different features such as time travelling, layout optimization, query performance, aids in Data Engineering.
This will help and enhance Datasets library from Machine Learning utility to Data Engineering utilities and expand horizons thereafter. I am totally using Datasets library in all my usecases and as my role expands so does the work, compatibility with Datasets library is something I don't want to lose.
### Your contribution
Would love to work on this feature, even if this has to picked up from scratch, including design paradigms and patterns.
I have basic idea about Delta Live Tables, would brush it easily for this feature.
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[] | 2022-11-09T02:42:18
| 2022-11-09T02:42:36
| 2022-11-09T02:42:36
|
NONE
| null | null | null | null |
### Feature request
Adding compatibility of Datasets library with Delta Format. Elevating the utilities of Datasets library from Machine Learning Scope to Data Engineering Scope as well.
### Motivation
We know datasets library can absorb csv, json, parquet, etc. file formats but it would be great if Datasets library could work with Delta Tables (with delta format) as it has different features such as time travelling, layout optimization, query performance, aids in Data Engineering.
This will help and enhance Datasets library from Machine Learning utility to Data Engineering utilities and expand horizons thereafter. I am totally using Datasets library in all my usecases and as my role expands so does the work, compatibility with Datasets library is something I don't want to lose.
### Your contribution
Would love to work on this feature, even if this has to picked up from scratch, including design paradigms and patterns.
I have basic idea about Delta Live Tables, would brush it easily for this feature.
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save_elasticsearch_index
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[
"Hi ! I think there exist tools to dump and reload an index in your elastic search but I'm not super familiar with it.\r\n\r\nAnyway after reloading an index in elastic search you can call `ds.load_elasticsearch_index` which will connect the index to the dataset without re-indexing"
] | 2022-11-08T23:06:52
| 2022-11-09T13:16:45
| null |
NONE
| null | null | null | null |
Hi,
I am new to Dataset and elasticsearch. I was wondering is there any equivalent approach to save elasticsearch index as of save_faiss_index locally for later use, to remove the need to re-index a dataset?
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Implement ability to define splits in metadata section of dataset card
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[
"@merveenoyan Do you want different files to be splits or configurations?\r\n\r\nFrom [what you specified in `Readme.md`](https://huggingface.co/datasets/inria-soda/tabular-benchmark/commit/fb4575853772c62a20203bdd6cc0202f5db4ce4e) I hypothesize that you want to have 4 **configs** corresponding to directories: `\"clf_cat\", \"clf_num\", \"reg_cat\", \"reg_num\"`. And inside each config you require to have as many splits as there are `csv` files\r\nso if you run \r\n```python\r\nload_dataset(\"inria-soda/tabular-benchmark\", \"clf_cat\", split=\"compass\")\r\n```\r\nyou will generate the data only from `compass.csv` file.\r\nIn this case, running `load_dataset(\"inria-soda/tabular-benchmark\", \"clf_cat\"`) without split parameter will return `DatasetDict` object with `\"KDDCup09_upselling\", \"cat_compass\", \"cat_covertype\", ... \"road_safety\"` keys (which values are splits - `Dataset` objects)\r\n\r\n**or**\r\ndo you want each file to be a separate config? Like:\r\n```python\r\nload_dataset(\"inria-soda/tabular-benchmark\", \"clf_cat_compass\") # returns DatasetDict with a single \"train\" split\r\n```\r\n**or**\r\nmaybe smth completely different? :smile: \r\n\r\nAnyway, now I have an impression that this is probably rather a matter of automatically inferring configs from repository structure rather than providing parameters in metadata yaml.\r\n",
"@polinaeterna I want the latter where you can think of every CSV file as a config, like MNLI from GLUE.",
"@merveenoyan @lhoestq I see two solutions to this case. \r\n1. Parse configurations automatically from directories names. That is, if you have data structure like:\r\n```\r\ntabular-benchmark\r\n └─clf_cat_compass\r\n └─compass.csv\r\n └─clf_cat_cat_covertype\r\n └─covertype.csv\r\n ...\r\n └─reg_cat_house_sales\r\n └─house_sales.csv\r\n```\r\nyou'll get \"clf_cat_compass\", \"clf_cat_cat_covertype\", ... \"reg_cat_house_sales\" configurations that would contain **only files from corresponding directories**. \r\n**\\+** this is a requested change and needed in general and would solve other problems, see https://github.com/huggingface/datasets/issues/4578, would also help with https://github.com/huggingface/datasets/pull/5213 which I'm working on currently\r\n**\\+** would allow users to do just `load_dataset(“inria-soda/tabular-benchmark”, “clf_cat_compass”)`, no `data_files` param required\r\n**\\-** in this specific case it would require restructuring of the data - putting each file in a directory named as a config name (to me personally it doesn't seem to be a big deal) \r\n\r\n2. More or less what we discussed before - add support for manually specifying parameters in the metadata. We can add new metadata yaml field (say, `\"custom_configs_info\"`), so that we can provide smth like:\r\n```yaml\r\n---\r\n...\r\ndataset_info:\r\n ... \r\ncustom_configs_info:\r\n- config_name: reg_cat_house_sales\r\n data_files:\r\n - reg_cat/house_sales.csv\r\n- config_name: clf_cat_compass\r\n data_files:\r\n - clf_cat/compass.csv\r\n...\r\n---\r\n```\r\n**\\+** Would be useful not only for tabular data and not only for `data_files` parameter - any packaged dataset’s viewer can be customized to use specific, non-default parameters. @merveenoyan do you maybe have any other examples/use cases in mind where you want to provide any specific parameters to the viewer? \r\n**\\-** I'm not sure here but assume that it might require changes in interaction with the viewer on the hub side - to parse these configurations, as they not default configurations (not in `BUILDER_CONFIGS` list). cc @severo But probably this can be solved on the `datasets` side too.\r\n\r\nOverall, I would start from implementing the first solution since it's related to what I'm doing now and is super useful for `datasets` in general. And then if we agree that having more flexibility in providing parameters to the viewer is required, I can implement the second one. Let me know what you think :) ",
"> We can add new metadata yaml field (say, \"custom_configs_info\"), so that we can provide smth like:\r\n\r\nLove it ! Some other ideas to name the \"custom_configs_info\" field: \"configs\", \"parameters\", \"config_args\", \"configurations\"\r\n\r\n> it might require changes in interaction with the viewer on the hub side - to parse these configurations, as they not default configurations (not in BUILDER_CONFIGS list)\r\n\r\nIf we update the `get_dataset_config_names()` function in `datasets` in inspect.py we should be fine - that's what the viewer is using\r\n\r\n> Overall, I would start from implementing the first solution since it's related to what I'm doing now and is super useful for datasets in general. And then if we agree that having more flexibility in providing parameters to the viewer is required, I can implement the second one. Let me know what you think :)\r\n\r\nActually I feel like the second solution includes the first use case you mentioned. If you implement the second solution, then users would just have to add a few lines of YAML and their directories would be considered configurations no ? Maybe there's no need to implement two different logics to do the same thing",
"is there any update on this? 🕵🏻",
"@merveenoyan I haven't started working on this yet, working on adding configs to packaged datasets instead: https://github.com/huggingface/datasets/pull/5213 because this both would allow you to solve your issue and is a frequently requested feature.\r\n\r\nadding arbitrary parameters to yaml would be my next task i think!",
"@merveenoyan ignore my comment above, I'm switching to this task now :D",
"I want to be able to create folders in a model.",
"Addressed in #5331 "
] | 2022-11-07T13:27:16
| 2023-07-21T14:36:02
| 2023-07-21T14:36:01
|
CONTRIBUTOR
| null | null | null | null |
### Feature request
If you go here: https://huggingface.co/datasets/inria-soda/tabular-benchmark/tree/main you will see bunch of folders that has various CSV files. I’d like dataset viewer to show these files instead of only one dataset like it currently does. (and also people to be able to load them as splits instead of loading through `data_files`)
e.g GLUE has various splits on viewer but it’s too overkill to ask people to implement loading script, so it would be better to let them define these in the README file instead.
Also pinging @polinaeterna @lhoestq @adrinjalali
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Connection error of the HuggingFace's dataset Hub due to SSLError with proxy
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[
"Hi ! It looks like an issue with your python environment, can you make sure you're able to run GET requests to https://huggingface.co using `requests` in python ?",
"Thanks for your reply. Does this mean that I have to use the `do_dataset `function and the `requests `function to download the dataset from the company's proxy environment?\r\n\r\n\r\n* Reference: \r\n```bash\r\n### How to load this dataset directly with the [datasets](https://github.com/huggingface/datasets) library\r\n\r\n\r\n* https://huggingface.co/datasets/moyix/debian_csrc\r\n\r\n* from datasets import load_dataset\r\ndataset = load_dataset(\"moyix/debian_csrc\")\r\n\r\n\r\n\r\n### Or just clone the dataset repo\r\n\r\n\r\ngit lfs install\r\ngit clone https://huggingface.co/datasets/moyix/debian_csrc\r\n# if you want to clone without large files – just their pointers\r\n# prepend your git clone with the following env var:\r\nGIT_LFS_SKIP_SMUDGE=1\r\n```",
"You can use `requests` to see if downloading a file from the Hugging Face Hub works. If so, then `datasets` should work as well. If not, then you have to find another way using an internet connection that works",
"I resolved this issue by applying to \"unblock websites\" at https://huggingface.com in a corporate network environment with a firewall. \r\n",
"> Hi ! It looks like an issue with your python environment, can you make sure you're able to run GET requests to https://huggingface.co using `requests` in python ?\r\n\r\nyes，but still not work\r\n\r\n\r\n\r\n",
"I read https://github.com/huggingface/datasets/blob/main/src/datasets/load.py, it fail when get the dataset metadata, so download_config has not worked.\r\n```python\r\n hf_api = HfApi(config.HF_ENDPOINT)\r\n try:\r\n dataset_info = hf_api.dataset_info(\r\n repo_id=path,\r\n revision=revision,\r\n token=download_config.token,\r\n timeout=100.0,\r\n )\r\n except Exception as e: # noqa catch any exception of hf_hub and consider that the dataset doesn't exist\r\n if isinstance(\r\n e,\r\n (\r\n OfflineModeIsEnabled,\r\n requests.exceptions.ConnectTimeout,\r\n requests.exceptions.ConnectionError,\r\n ),\r\n ):\r\n raise ConnectionError(f\"Couldn't reach '{path}' on the Hub ({type(e).__name__})\")\r\n```\r\nI configure the huggingface_hub api, use configure_http_backend\r\n```python\r\nfrom huggingface_hub import configure_http_backend\r\ndef backend_factory() -> requests.Session:\r\n session = requests.Session()\r\n session.proxies = proxy\r\n session.verify = False\r\n return session\r\n\r\nconfigure_http_backend(backend_factory=backend_factory)\r\n```\r\nIt works.",
"Even tough it does not look like a certificate error in the error message, I had the same error and adding following lines to my code solved my problem.\r\n\r\nimport os\r\nos.environ['CURL_CA_BUNDLE'] = ''",
"@kuikuikuizzZ Could you please explain where the configuration code is added?",
"> Even tough it does not look like a certificate error in the error message, I had the same error and adding following lines to my code solved my problem.\r\n> \r\n> import os os.environ['CURL_CA_BUNDLE'] = ''\r\n\r\nWorked for as well!\r\nI faced the issue while submitting jobs through SLURM.",
"> Even tough it does not look like a certificate error in the error message, I had the same error and adding following lines to my code solved my problem.\r\n> \r\n> import os os.environ['CURL_CA_BUNDLE'] = ''\r\n\r\ndoesn't work , what does this code mean?",
"If you're working on a cluster, may be that they disabled remote connections for security purposes, you will have to download the files on your local machine and then transfer them to your cluster through scp or some other transfer protocol. I know you've probably resolved the issue, but that is for anyone in the future who might stumble across this thread and needs help because I struggled with that even after reading this thread.",
"> Even tough it does not look like a certificate error in the error message, I had the same error and adding following lines to my code solved my problem.\r\n> \r\n> import os os.environ['CURL_CA_BUNDLE'] = ''\r\n\r\nIf this not work, try this:\r\n```bash\r\nexport http_proxy=\"http://127.0.0.1:10810\"\r\nexport https_proxy=\"http://127.0.0.1:10810\"\r\ngit config --global http.proxy http://127.0.0.1:10810\r\ngit config --global https.proxy http://127.0.0.1:10810\r\n\r\njupyter notebook\r\n```\r\n\r\nset your proxy env first, then start notebook **in this session**\r\n",
"> If you're working on a cluster, may be that they disabled remote connections for security purposes, you will have to download the files on your local machine and then transfer them to your cluster through scp or some other transfer protocol. I know you've probably resolved the issue, but that is for anyone in the future who might stumble across this thread and needs help because I struggled with that even after reading this thread.\r\n\r\nThank you buddy!",
"@shafferjohn \nexport http_proxy=\"http://127.0.0.1:10810\"\nexport https_proxy=\"http://127.0.0.1:10810\"\ngit config --global http.proxy http://127.0.0.1:10810\ngit config --global https.proxy http://127.0.0.1:10810\n\njupyter notebook\n\nthis way worked for me"
] | 2022-11-07T06:56:23
| 2025-03-08T09:04:10
| null |
NONE
| null | null | null | null |
### Describe the bug
It's weird. I could not normally connect the dataset Hub of HuggingFace due to a SSLError in my office.
Even when I try to connect using my company's proxy address (e.g., http_proxy and https_proxy),
I'm getting the SSLError issue. What should I do to download the datanet stored in HuggingFace normally?
I welcome any comments. I think those comments will be helpful to me.
* Dataset address - https://huggingface.co/datasets/moyix/debian_csrc/viewer/moyix--debian_csrc
* Log message
```
............ OMISSION ..............
Traceback (most recent call last):
File "/data/home/geunsik-lim/qtlab/./transformers/examples/pytorch/language-modeling/run_clm.py", line 587, in <module>
main()
File "/data/home/geunsik-lim/qtlab/./transformers/examples/pytorch/language-modeling/run_clm.py", line 278, in main
raw_datasets = load_dataset(
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1719, in load_dataset
builder_instance = load_dataset_builder(
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1497, in load_dataset_builder
dataset_module = dataset_module_factory(
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1222, in dataset_module_factory
raise e1 from None
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1179, in dataset_module_factory
raise ConnectionError(f"Couldn't reach '{path}' on the Hub ({type(e).__name__})")
ConnectionError: Couldn't reach 'moyix/debian_csrc' on the Hub (SSLError)
[2022-11-07 15:23:38,476] [INFO] [launch.py:318:sigkill_handler] Killing subprocess 6760
[2022-11-07 15:23:38,476] [ERROR] [launch.py:324:sigkill_handler] ['/home/geunsik-lim/anaconda3/envs/deepspeed/bin/python', '-u', './transformers/examples/pytorch/language-modeling/run_clm.py', '--local_rank=0', '--model_name_or_path=Salesforce/codegen-350M-multi', '--per_device_train_batch_size=1', '--learning_rate', '2e-5', '--num_train_epochs', '1', '--output_dir=./codegen-350M-finetuned', '--overwrite_output_dir', '--dataset_name', 'moyix/debian_csrc', '--cache_dir', '/data/home/geunsik-lim/.cache', '--tokenizer_name', 'Salesforce/codegen-350M-multi', '--block_size', '2048', '--gradient_accumulation_steps', '32', '--do_train', '--fp16', '--deepspeed', 'ds_config_zero2.json'] exits with return code = 1
real 0m7.742s
user 0m4.930s
```
### Steps to reproduce the bug
Steps to reproduce this behavior.
```
(deepspeed) geunsik-lim@ai02:~/qtlab$ ./test_debian_csrc_dataset.py
Traceback (most recent call last):
File "/data/home/geunsik-lim/qtlab/./test_debian_csrc_dataset.py", line 6, in <module>
dataset = load_dataset("moyix/debian_csrc")
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1719, in load_dataset
builder_instance = load_dataset_builder(
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1497, in load_dataset_builder
dataset_module = dataset_module_factory(
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1222, in dataset_module_factory
raise e1 from None
File "/home/geunsik-lim/anaconda3/envs/deepspeed/lib/python3.10/site-packages/datasets/load.py", line 1179, in dataset_module_factory
raise ConnectionError(f"Couldn't reach '{path}' on the Hub ({type(e).__name__})")
ConnectionError: Couldn't reach 'moyix/debian_csrc' on the Hub (SSLError)
(deepspeed) geunsik-lim@ai02:~/qtlab$
(deepspeed) geunsik-lim@ai02:~/qtlab$
(deepspeed) geunsik-lim@ai02:~/qtlab$
(deepspeed) geunsik-lim@ai02:~/qtlab$ cat ./test_debian_csrc_dataset.py
#!/usr/bin/env python
from datasets import load_dataset
dataset = load_dataset("moyix/debian_csrc")
```
1. Adde proxy address of a company in /etc/profile
2. Download dataset with load_dataset() function of datasets package that is provided by HuggingFace.
3. In this case, the address would be "moyix--debian_csrc".
4. I get the "`ConnectionError: Couldn't reach 'moyix/debian_csrc' on the Hub (SSLError`)" error message.
### Expected behavior
* error message:
ConnectionError: Couldn't reach 'moyix/debian_csrc' on the Hub (SSLError)
### Environment info
* software version information:
```
(deepspeed) geunsik-lim@ai02:~$
(deepspeed) geunsik-lim@ai02:~$ conda list -f pytorch
# packages in environment at /home/geunsik-lim/anaconda3/envs/deepspeed:
#
# Name Version Build Channel
pytorch 1.13.0 py3.10_cuda11.7_cudnn8.5.0_0 pytorch
(deepspeed) geunsik-lim@ai02:~$ conda list -f python
# packages in environment at /home/geunsik-lim/anaconda3/envs/deepspeed:
#
# Name Version Build Channel
python 3.10.6 haa1d7c7_1
(deepspeed) geunsik-lim@ai02:~$ conda list -f datasets
# packages in environment at /home/geunsik-lim/anaconda3/envs/deepspeed:
#
# Name Version Build Channel
datasets 2.6.1 py_0 huggingface
(deepspeed) geunsik-lim@ai02:~$ uname -a
Linux ai02 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:07:22 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
(deepspeed) geunsik-lim@ai02:~$ cat /etc/lsb-release
DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=20.04
DISTRIB_CODENAME=focal
DISTRIB_DESCRIPTION="Ubuntu 20.04.5 LTS"
```
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